Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 3.2e-53 211.5 106 100.0
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 6.3e-41 170.6 104 78.8
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.1e-40 167.9 106 77.4
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 9.2e-40 166.8 103 78.6
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 2.0e-39 165.6 105 77.1
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 1.0e-38 163.3 105 75.2
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 3.8e-38 161.4 106 75.5
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.1e-37 159.8 106 73.6
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 1.9e-37 159.1 106 74.5
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.9e-37 159.1 106 74.5
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.9e-37 159.1 106 74.5
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 3.0e-35 151.8 106 69.8
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 3.0e-35 151.8 106 70.8
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 4.0e-35 151.4 106 70.8
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 6.8e-35 150.6 106 68.9
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 1.2e-34 149.8 96 75.0
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 1.5e-34 149.4 107 70.1
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 2.0e-34 149.1 103 70.9
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 2.6e-34 148.7 106 68.9
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 9.8e-34 146.7 103 68.9
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 9.8e-34 146.7 96 72.9
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 1.3e-33 146.4 106 67.9
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.3e-33 146.4 106 67.0
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.3e-33 146.4 97 70.1
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 1.3e-33 146.4 106 68.9
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.7e-33 146.0 96 69.8
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.7e-33 146.0 103 68.0
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 1.7e-33 146.0 103 68.9
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 4.9e-33 144.4 106 67.0
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.4e-32 142.9 89 75.3
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 1.4e-32 142.9 103 67.0
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.2e-32 141.7 107 65.4
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 3.2e-32 141.7 97 72.2
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 5.4e-32 141.0 84 76.2
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 5.4e-32 141.0 93 74.2
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 9.2e-32 140.2 97 68.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 9.2e-32 140.2 100 67.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.2e-31 139.8 107 64.5
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 1.2e-31 139.8 105 62.9
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.2e-31 139.8 100 66.0
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.2e-31 139.8 106 65.1
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 1.6e-31 139.4 84 76.2
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 2.0e-31 139.0 103 63.1
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 2.0e-31 139.0 103 63.1
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 4.6e-31 137.9 88 75.0
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 5.9e-31 137.5 94 70.2
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.0e-30 136.7 86 73.3
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 1.0e-30 136.7 86 73.3
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.3e-30 136.3 86 73.3
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.3e-30 136.3 106 59.4
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 2.3e-30 135.6 101 64.4
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 3.0e-30 135.2 94 67.0
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 3.9e-30 134.8 95 68.4
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 3.9e-30 134.8 106 64.2
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 5.0e-30 134.4 103 63.1
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 6.6e-30 134.0 88 70.5
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 8.6e-30 133.7 94 68.1
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 1.5e-29 132.9 101 65.3
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.9e-29 132.5 106 59.4
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.9e-29 132.5 106 59.4
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 4.3e-29 131.3 91 70.3
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 5.6e-29 131.0 88 69.3
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 9.5e-29 130.2 93 64.5
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 1.2e-28 129.8 106 60.4
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 1.2e-28 129.8 106 59.4
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 1.2e-28 129.8 88 70.5
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 1.2e-28 129.8 103 59.2
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 2.8e-28 128.6 87 70.1
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 1.0e-27 126.7 86 67.4
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 3.1e-27 125.2 89 64.0
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 3.1e-27 125.2 83 67.5
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 4.0e-27 124.8 89 64.0
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 5.2e-27 124.4 85 63.5
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 1.2e-26 123.2 93 62.4
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.5e-26 122.9 82 70.7
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 1.5e-26 122.9 82 70.7
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 1.5e-26 122.9 89 61.8
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 2.0e-26 122.5 89 61.8
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 5.8e-26 120.9 89 61.8
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 7.5e-26 120.6 89 60.7
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.3e-25 119.8 87 62.1
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.3e-25 119.8 87 60.9
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 1.3e-25 119.8 87 60.9
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.3e-25 119.8 87 60.9
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.3e-25 119.8 87 60.9
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 1.3e-25 119.8 87 60.9
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 1.7e-25 119.4 83 63.9
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 2.2e-25 119.0 108 56.5
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 2.2e-25 119.0 89 60.7
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 3.7e-25 118.2 81 64.2
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 4.9e-25 117.9 83 65.1
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 6.4e-25 117.5 87 63.2
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.1e-24 116.7 91 63.7
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 1.4e-24 116.3 82 65.9
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 3.2e-24 115.2 82 64.6
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 1.2e-23 113.2 91 60.4
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.6e-23 112.8 96 55.2
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 3.9e-22 108.2 90 58.9
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 8.6e-22 107.1 77 70.1
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 8.6e-22 107.1 94 55.3
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 8.6e-22 107.1 85 60.0
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 3.3e-21 105.1 86 53.5
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 6.2e-20 100.9 89 48.3
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.4e-19 99.8 89 47.2
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.8e-19 99.4 93 52.7
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 2.0e-18 95.9 63 71.4
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 3.2e-16 88.6 100 46.0
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 7.1e-16 87.4 89 46.1
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.1e-15 85.9 81 43.2
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 2.1e-12 75.9 73 46.6
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 4.7e-12 74.7 84 39.3
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 1.4e-11 73.2 84 47.6
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 2.6e-10 68.9 84 35.7
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 4.9e-09 64.7 80 38.8
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 8.6e-06 53.9 92 35.9


User provided reference genes

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