Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 0.0e+00 1264.6 668 100.0
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 1.1e-284 983.0 670 80.0
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 3.0e-282 974.9 670 79.3
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 8.3e-264 913.7 662 73.4
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 3.3e-244 848.6 670 70.4
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 4.3e-244 848.2 662 68.3
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 4.5e-241 838.2 679 68.6
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 5.8e-241 837.8 671 68.1
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 1.8e-237 826.2 668 67.7
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 2.5e-236 822.4 673 66.4
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 2.1e-235 819.3 664 69.6
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 2.8e-235 818.9 665 65.1
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 5.3e-234 814.7 667 69.0
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 5.8e-233 811.2 665 67.4
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 2.9e-232 808.9 669 67.0
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 6.0e-230 801.2 671 67.1
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 3.0e-229 798.9 582 73.9
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 1.6e-227 793.1 670 65.2
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 4.8e-227 791.6 660 65.6
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 4.8e-227 791.6 665 66.9
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 6.2e-227 791.2 670 67.5
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 6.2e-227 791.2 662 67.8
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 9.0e-226 787.3 660 67.7
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 1.5e-225 786.6 662 67.2
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 4.5e-225 785.0 662 67.1
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 7.6e-225 784.3 667 65.8
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 4.9e-224 781.6 693 64.8
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.9e-223 779.6 670 66.6
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 9.3e-223 777.3 680 64.4
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.2e-222 776.9 663 64.9
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 1.0e-221 773.9 669 64.3
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 3.0e-221 772.3 601 69.1
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 3.3e-220 768.8 643 64.9
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 4.1e-218 761.9 675 64.4
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 2.0e-217 759.6 591 68.7
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 8.5e-216 754.2 664 64.3
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.9e-215 753.1 668 64.8
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 3.2e-215 752.3 686 64.9
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 4.2e-215 751.9 672 63.1
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 5.5e-215 751.5 579 69.8
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.2e-214 750.4 673 64.3
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 1.6e-214 750.0 671 63.6
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.1e-214 749.6 590 67.5
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 2.7e-214 749.2 672 64.1
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 2.7e-214 749.2 592 68.1
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 3.6e-214 748.8 615 66.2
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 3.6e-214 748.8 677 60.9
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.3e-213 746.1 639 65.1
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 6.7e-213 744.6 625 66.4
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 1.5e-212 743.4 670 62.2
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.9e-212 743.0 670 60.9
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 4.3e-212 741.9 595 67.6
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 5.7e-212 741.5 663 62.0
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 4.8e-211 738.4 589 67.9
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 6.3e-211 738.0 587 67.5
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 5.0e-208 728.4 673 63.4
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 4.2e-207 725.3 591 67.0
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.1e-206 723.0 663 59.9
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 2.7e-206 722.6 668 59.3
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 2.7e-206 722.6 672 62.8
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.2e-201 707.2 681 57.9
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 1.0e-200 704.1 676 59.3
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 9.4e-199 697.6 631 63.1
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 4.7e-198 695.3 636 61.2
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 8.2e-195 684.5 580 62.9
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 7.0e-194 681.4 590 60.8
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 1.7e-192 676.8 675 56.4
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 6.5e-192 674.9 577 65.0
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 3.2e-191 672.5 546 66.8
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 4.2e-191 672.2 635 60.8
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.6e-190 669.1 595 64.4
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.6e-190 669.1 598 63.4
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.0e-189 667.5 659 59.2
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.4e-189 667.2 636 57.2
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 3.0e-189 666.0 531 67.8
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 5.2e-189 665.2 600 62.5
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 7.5e-188 661.4 636 58.8
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 2.2e-187 659.8 636 57.1
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 4.8e-187 658.7 682 55.0
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.6e-185 653.7 670 56.3
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 1.6e-185 653.7 621 62.5
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 5.9e-185 651.7 668 56.7
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 8.5e-184 647.9 641 57.3
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 1.5e-183 647.1 627 59.6
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 2.1e-182 643.3 616 58.9
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 4.7e-182 642.1 463 73.2
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 1.0e-181 641.0 529 68.8
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 3.4e-180 636.0 614 59.1
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 7.5e-180 634.8 599 59.6
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 7.0e-178 628.2 578 61.9
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 7.7e-177 624.8 475 67.8
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 4.0e-173 612.5 614 58.1
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.4e-170 604.0 450 70.4
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 1.2e-169 600.9 659 54.2
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 2.7e-153 546.6 549 54.1
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 1.4e-149 534.3 549 56.5
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 1.6e-142 510.8 543 54.5
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 2.8e-118 430.3 607 43.2
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 1.2e-108 398.3 286 69.9
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 4.2e-82 310.1 641 37.1
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 4.2e-82 310.1 641 37.1
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 9.8e-63 245.7 439 36.0
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.2e-52 212.2 427 33.7
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 4.1e-37 160.6 142 60.6
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.2e-31 142.5 195 44.1
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 6.0e-28 130.2 169 46.2
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.1e-24 119.4 181 43.6
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.4e-21 108.2 185 38.4
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 3.4e-15 87.8 207 29.0
VMungo0464G0544 Vigna mungo HOM05D006787 ORTHO05D008366 1.9e-13 82.0 105 45.7
VMungo0647G0587 Vigna mungo HOM05D006787 ORTHO05D008366 2.4e-13 81.6 105 43.8
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 2.5e-10 71.6 115 32.2
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 3.3e-10 71.2 55 58.2
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 4.3e-10 70.9 99 44.4
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.6e-09 68.9 85 40.0
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 6.2e-09 67.0 124 32.3


User provided reference genes

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