Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G027000 Carya illinoinensis HOM05D005704 ORTHO05D015589 6.6e-27 123.2 60 100.0
Potri.002G155400 Populus trichocarpa HOM05D005704 ORTHO05D006897 8.3e-14 79.7 109 47.7
CiPaw.02G026700 Carya illinoinensis HOM05D005704 ORTHO05D006897 6.0e-12 73.6 36 100.0
Aqoxy7G00396 Aquilegia oxysepala HOM05D005704 ORTHO05D006897 1.3e-11 72.4 36 97.2
CiPaw.02G027100 Carya illinoinensis HOM05D005704 ORTHO05D015589 1.3e-11 72.4 36 97.2
Eucgr.E00194 Eucalyptus grandis HOM05D005704 ORTHO05D006897 1.3e-11 72.4 36 97.2
Hund27313 Selenicereus undatus HOM05D005704 ORTHO05D006897 1.3e-11 72.4 36 97.2
EL10Ac1g00515 Beta vulgaris HOM05D005704 ORTHO05D006897 1.7e-11 72.0 36 97.2
ClCG05G001760 Citrullus lanatus HOM05D005704 ORTHO05D006897 1.7e-11 72.0 36 94.4
COL.COLO4_12606 Corchorus olitorius HOM05D005704 ORTHO05D006897 1.7e-11 72.0 146 37.0
DCAR_025148 Daucus carota HOM05D005704 ORTHO05D006897 1.7e-11 72.0 35 97.1
PSO782G3686 Papaver somniferum HOM05D005704 ORTHO05D006897 1.7e-11 72.0 36 94.4
ATR0757G056 Amborella trichopoda HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
CSS0006849 Camellia sinensis var. sinensis HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 94.4
Cpa.g.sc18.211 Carica papaya HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Cfa004204 Carpinus fangiana HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
AUR62004305 Chenopodium quinoa HOM05D005704 ORTHO05D006897 2.3e-11 71.6 34 100.0
Ciclev10020663m.g Citrus clementina HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Haze_15205 Corylus avellana HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Gohir.A11G086300 Gossypium hirsutum HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Gohir.D11G090500 Gossypium hirsutum HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Gorai.007G096500 Gossypium raimondii HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Potri.014G078800 Populus trichocarpa HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
PGR042G1999 Punica granatum HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Sabra14G0057000 Salix brachista HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
SalBow5G2510 Salvia bowleyana HOM05D005704 ORTHO05D006897 2.3e-11 71.6 34 100.0
SalBow5G4035 Salvia bowleyana HOM05D005704 ORTHO05D006897 2.3e-11 71.6 34 100.0
Sed0002697 Sechium edule HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
TWI59G0155 Tripterygium wilfordii HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
TAR374G0147 Trochodendron aralioides HOM05D005704 ORTHO05D006897 2.3e-11 71.6 36 97.2
Manes.05G038700 Manihot esculenta HOM05D005704 ORTHO05D006897 3.0e-11 71.2 36 94.4
QL08p050136 Quercus lobata HOM05D005704 ORTHO05D006897 3.0e-11 71.2 35 97.1
THA.LOC104817279 Tarenaya hassleriana HOM05D005704 ORTHO05D006897 3.0e-11 71.2 36 94.4
Rhsim01G0153000 Rhododendron simsii HOM05D005704 ORTHO05D006897 3.9e-11 70.9 36 94.4
Atru.chr5.425 Acer truncatum HOM05D005704 ORTHO05D006897 5.1e-11 70.5 36 94.4
AUR62022755 Chenopodium quinoa HOM05D005704 ORTHO05D006897 5.1e-11 70.5 34 97.1
MELO3C006136.2 Cucumis melo HOM05D005704 ORTHO05D006897 5.1e-11 70.5 36 94.4
CsaV3_3G009150 Cucumis sativus L. HOM05D005704 ORTHO05D006897 5.1e-11 70.5 36 94.4
Lsat_1_v5_gn_3_135801 Lactuca sativa HOM05D005704 ORTHO05D006897 5.1e-11 70.5 36 94.4
Lalb_Chr10g0097331 Lupinus albus HOM05D005704 ORTHO05D006897 5.1e-11 70.5 36 94.4
Nn6g34198 Nelumbo nucifera HOM05D005704 ORTHO05D006897 5.1e-11 70.5 36 94.4
Ah.05g176310 Amaranthus hybridus HOM05D005704 ORTHO05D006897 6.6e-11 70.1 36 94.4
ECA240G1317 Erigeron canadensis HOM05D005704 ORTHO05D006897 6.6e-11 70.1 36 94.4
GSVIVG01027497001 Vitis vinifera HOM05D005704 ORTHO05D006897 6.6e-11 70.1 36 94.4
Actinidia33435 Actinidia chinensis HOM05D005704 ORTHO05D006897 8.6e-11 69.7 36 91.7
CANSAT56G4288 Cannabis sativa HOM05D005704 ORTHO05D006897 8.6e-11 69.7 34 97.1
Ca_25785_v3 Cicer arietinum L. HOM05D005704 ORTHO05D006897 8.6e-11 69.7 34 97.1
MD01G1049200 Malus domestica HOM05D005704 ORTHO05D006897 8.6e-11 69.7 36 94.4
Medtr8g032340 Medicago truncatula HOM05D005704 ORTHO05D006897 8.6e-11 69.7 34 97.1
Medtr8g032480 Medicago truncatula HOM05D005704 ORTHO05D006897 8.6e-11 69.7 34 97.1
Psat4g153600 Pisum sativum HOM05D005704 ORTHO05D006897 8.6e-11 69.7 34 97.1
Prupe.2G157700 Prunus persica HOM05D005704 ORTHO05D006897 8.6e-11 69.7 36 94.4
Prupe.2G158000 Prunus persica HOM05D005704 ORTHO05D006897 8.6e-11 69.7 36 94.4
SGA_v2.0_scaffold11G05652 Striga asiatica HOM05D005704 ORTHO05D006897 8.6e-11 69.7 34 97.1
vmacro20960 Vaccinium macrocarpon HOM05D005704 ORTHO05D006897 8.6e-11 69.7 36 91.7
Aa31LG1G27230 Aethionema arabicum HOM05D005704 ORTHO05D006897 1.1e-10 69.3 36 91.7
Sc23g0003160 Simmondsia chinensis HOM05D005704 ORTHO05D006897 1.5e-10 68.9 36 91.7
arahy.Tifrunner.gnm1.ann1.5VQ11A Arachis hypogaea HOM05D005704 ORTHO05D006897 1.9e-10 68.6 36 94.4
arahy.Tifrunner.gnm1.ann1.G8YXW0 Arachis hypogaea HOM05D005704 ORTHO05D006897 1.9e-10 68.6 36 94.4
Glyma.07G075900 Glycine max HOM05D005704 ORTHO05D006897 1.9e-10 68.6 34 94.1
Oeu014688.2 Olea europaea HOM05D005704 ORTHO05D006897 1.9e-10 68.6 34 94.1
Os01g0958100 Oryza sativa ssp. japonica HOM05D005704 ORTHO05D006897 1.9e-10 68.6 34 91.2
Phvul.010G093600 Phaseolus vulgaris HOM05D005704 ORTHO05D006897 1.9e-10 68.6 34 94.1
VMungo0331G0777 Vigna mungo HOM05D005704 ORTHO05D006897 1.9e-10 68.6 34 94.1
Zm00001eb140490 Zea mays HOM05D005704 ORTHO05D006897 1.9e-10 68.6 34 91.2
arahy.Tifrunner.gnm1.ann1.IAYA85 Arachis hypogaea HOM05D005704 ORTHO05D006897 2.5e-10 68.2 35 94.3
arahy.Tifrunner.gnm1.ann1.P882K7 Arachis hypogaea HOM05D005704 ORTHO05D006897 2.5e-10 68.2 35 94.3
Glyma.07G075550 Glycine max HOM05D005704 ORTHO05D015589 2.5e-10 68.2 34 94.1
Lj3g0023098 Lotus japonicus HOM05D005704 ORTHO05D006897 2.5e-10 68.2 34 94.1
MBI04_g04729_MAGBIO Magnolia biondii HOM05D005704 ORTHO05D006897 3.3e-10 67.8 36 91.7
Peaxi162Scf00021g00118 Petunia axillaris HOM05D001354 ORTHO05D006897 3.3e-10 67.8 34 94.1
SMO364G0299 Selaginella moellendorffii HOM05D005704 ORTHO05D006897 3.3e-10 67.8 34 91.2
unitig_0.g2767 Utricularia gibba HOM05D001354 ORTHO05D006897 3.3e-10 67.8 34 94.1
BcaB02g09007 Brassica carinata HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
BcaC02g07052 Brassica carinata HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
BcaC02g07053 Brassica carinata HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
BcaC02g12182 Brassica carinata HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
A04p34030 Brassica napus HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
A05p05770 Brassica napus HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
C04p06710 Brassica napus HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
C04p71830 Brassica napus HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
BolC4t22292H Brassica oleracea HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
BolC4t28681H Brassica oleracea HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
BraA04t18864Z Brassica rapa HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
Thhalv10001508m.g Eutrema salsugineum HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
FAN01G0806 Fragaria x ananassa HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
FAN06G1057 Fragaria x ananassa HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
FAN06G2859 Fragaria x ananassa HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
FAN10G2668 Fragaria x ananassa HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
FAN10G4172 Fragaria x ananassa HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
FAN23G0404 Fragaria x ananassa HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
Lj7A517T50 Lonicera japonica HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
MD07G1126100 Malus domestica HOM05D005704 ORTHO05D006897 4.3e-10 67.4 35 91.4
RcHm_v2.0_Chr1g0352781 Rosa chinensis HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 91.7
RcHm_v2.0_Chr1g0352821 Rosa chinensis HOM05D001354 ORTHO05D006897 4.3e-10 67.4 36 91.7
Sp4g27850 Schrenkiella parvula HOM05D005704 ORTHO05D006897 4.3e-10 67.4 36 88.9
Thecc.01G366000 Theobroma cacao HOM05D005704 ORTHO05D006897 4.3e-10 67.4 34 91.2
MSTRG.4872 Avicennia marina HOM05D005704 ORTHO05D006897 7.3e-10 66.6 34 91.2
CAN.G170.14 Capsicum annuum HOM05D005704 ORTHO05D006897 7.3e-10 66.6 34 91.2
Cc00_g12130 Coffea canephora HOM05D005704 ORTHO05D006897 7.3e-10 66.6 34 94.1
Dinv43773 Davidia involucrata HOM05D005704 ORTHO05D006897 7.3e-10 66.6 36 91.7
Solyc01g091580.3 Solanum lycopersicum HOM05D005704 ORTHO05D006897 7.3e-10 66.6 34 91.2
Sopen01g037350 Solanum pennellii HOM05D005704 ORTHO05D006897 7.3e-10 66.6 34 91.2
BraA05t19543Z Brassica rapa HOM05D005704 ORTHO05D006897 9.5e-10 66.2 36 86.1
AL4G44970 Arabidopsis lyrata HOM05D005704 ORTHO05D006897 1.6e-09 65.5 36 86.1
AT2G45770 Arabidopsis thaliana HOM05D005704 ORTHO05D006897 1.6e-09 65.5 36 86.1
Carub.0004s2848 Capsella rubella HOM05D005704 ORTHO05D006897 1.6e-09 65.5 36 86.1
Hma1.2p1_0001F.1_g001780 Hydrangea macrophylla HOM05D005704 ORTHO05D006897 2.8e-09 64.7 36 86.1
Nitab4.5_0005423g0010 Nicotiana tabacum HOM05D005704 ORTHO05D006897 2.8e-09 64.7 34 88.2
Nitab4.5_0006421g0070 Nicotiana tabacum HOM05D005704 ORTHO05D006897 2.8e-09 64.7 34 88.2
Pp3c17_14730 Physcomitrium patens HOM05D005704 ORTHO05D006897 2.8e-09 64.7 34 82.4
PGSC0003DMG400027773 Solanum tuberosum HOM05D005704 ORTHO05D006897 2.8e-09 64.7 34 88.2
CBR_g8497 Chara braunii HOM05D000019 ORTHO05D006897 3.6e-09 64.3 34 85.3
Duzib138G1914 Durio zibethinus HOM05D005704 ORTHO05D006897 4.7e-09 63.9 36 88.9
CBR_g45388 Chara braunii HOM05D005704 ORTHO05D006897 1.1e-08 62.8 34 82.4
HPP92_004951 Vanilla planifolia HOM05D005704 ORTHO05D006897 1.1e-08 62.8 36 86.1
CDE02G1367 Ceratophyllum demersum HOM05D005704 ORTHO05D006897 1.4e-08 62.4 36 86.1
AagrBONN_evm.TU.Sc2ySwM_117.2500 Anthoceros agrestis HOM05D005704 ORTHO05D006897 2.3e-08 61.6 34 79.4
Sabra02G0123300 Salix brachista HOM05D005704 ORTHO05D006897 4.0e-08 60.8 132 35.6
Cre05.g241450 Chlamydomonas reinhardtii HOM05D001354 ORTHO05D006897 1.5e-07 58.9 34 73.5
MBI03_g34068_MAGBIO Magnolia biondii HOM05D005704 ORTHO05D015589 2.0e-07 58.5 30 86.7
MCO16G535 Micromonas commoda HOM05D001354 ORTHO05D006897 3.4e-07 57.8 34 73.5
SEGI_03430 Sequoiadendron giganteum HOM05D005704 ORTHO05D006897 4.4e-07 57.4 34 76.5
PRCOL_00006003 Prasinoderma coloniale HOM05D001354 ORTHO05D006897 5.8e-07 57.0 34 73.5
Mapoly0097s0055 Marchantia polymorpha HOM05D005704 ORTHO05D006897 1.7e-06 55.5 34 70.6


User provided reference genes

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