Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 0.0e+00 1367.1 715 100.0
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 0.0e+00 1114.4 729 81.9
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 5.9e-311 1070.5 723 79.5
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 8.3e-286 986.9 726 72.5
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 4.1e-277 958.0 725 70.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 9.2e-277 956.8 728 72.1
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 3.3e-274 948.3 722 69.4
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 7.3e-274 947.2 726 71.6
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.2e-273 946.4 722 68.6
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.6e-273 946.0 732 69.1
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 2.1e-273 945.7 728 71.7
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 3.4e-271 938.3 723 68.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 5.8e-271 937.6 726 70.4
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 1.3e-270 936.4 725 67.3
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 7.1e-269 930.6 721 68.4
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 7.1e-269 930.6 720 68.8
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 2.7e-268 928.7 731 70.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 3.5e-268 928.3 724 69.6
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 4.6e-268 927.9 722 67.6
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 6.0e-268 927.5 725 68.1
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 1.7e-267 926.0 724 67.5
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 1.1e-266 923.3 730 70.3
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 4.3e-266 921.4 730 69.5
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.2e-265 919.8 719 69.3
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 3.6e-265 918.3 720 69.0
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 3.6e-265 918.3 592 80.6
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 5.2e-264 914.4 729 69.0
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 8.9e-264 913.7 722 68.6
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.5e-263 912.9 724 68.5
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.7e-262 909.4 728 69.8
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 3.8e-262 908.3 727 67.5
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.1e-260 902.5 722 66.8
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 6.0e-260 901.0 723 66.9
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.3e-259 899.8 717 68.6
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.3e-259 899.0 727 68.5
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.9e-259 898.3 727 68.4
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 2.1e-257 892.5 727 68.5
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.6e-257 891.7 727 68.0
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 4.7e-257 891.3 727 68.4
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 6.2e-257 891.0 730 67.1
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 5.2e-256 887.9 718 67.4
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.5e-255 886.3 722 67.5
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.1e-252 875.9 729 64.6
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 4.6e-252 874.8 796 62.3
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.6e-249 866.3 723 65.6
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.4e-248 863.2 743 65.3
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 5.3e-248 861.3 718 65.7
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.5e-247 858.2 723 65.0
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 5.8e-247 857.8 730 65.6
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 6.4e-246 854.4 728 65.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.4e-245 852.4 719 65.2
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.2e-245 852.0 716 64.8
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 7.9e-244 847.4 636 71.7
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 5.1e-243 844.7 720 64.7
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 2.5e-242 842.4 949 53.7
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.4e-237 826.6 726 63.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 2.7e-236 822.4 732 63.0
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 4.3e-234 815.1 721 62.4
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.7e-230 803.1 732 63.1
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.1e-229 800.4 734 64.6
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 3.2e-229 798.9 731 60.6
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 9.3e-229 797.3 726 61.4
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 1.3e-227 793.5 731 60.3
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.8e-227 793.1 729 59.3
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 1.6e-225 786.6 934 51.7
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.8e-224 783.1 724 59.7
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 1.5e-223 780.0 720 61.7
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 5.9e-223 778.1 724 62.6
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.3e-222 776.9 732 60.7
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.9e-221 773.1 706 61.3
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 7.2e-221 771.2 727 59.4
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 7.9e-220 767.7 720 61.2
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.3e-219 766.9 722 62.2
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 3.0e-219 765.8 724 62.2
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 6.7e-219 764.6 768 57.6
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.3e-217 760.4 720 59.9
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 2.2e-217 759.6 752 57.6
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 4.8e-217 758.4 718 60.2
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 3.4e-215 752.3 725 57.8
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 4.5e-215 751.9 724 59.3
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.4e-213 746.9 715 60.6
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 5.5e-213 745.0 725 57.2
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.5e-210 736.9 721 59.2
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.3e-210 735.7 726 56.1
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 9.7e-210 734.2 734 58.7
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 4.8e-209 731.9 723 56.6
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 6.3e-209 731.5 723 56.7
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.3e-209 731.5 587 66.3
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 6.9e-208 728.0 723 56.3
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 4.5e-207 725.3 724 56.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 3.8e-206 722.2 723 57.4
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 4.7e-204 715.3 747 54.5
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 6.7e-203 711.4 722 55.7
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 4.8e-201 705.3 578 68.3
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 7.7e-199 698.0 548 69.0
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 8.5e-198 694.5 752 54.8
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 3.3e-194 682.6 725 56.1
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 2.4e-192 676.4 721 55.3
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 6.5e-190 668.3 623 60.5
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 1.1e-189 667.5 531 65.2
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 1.7e-185 653.7 714 53.9
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.7e-185 652.5 618 59.4
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 3.7e-169 599.4 598 59.5
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 4.1e-160 569.3 590 55.3
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 2.4e-152 543.5 513 59.8
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 4.0e-147 526.2 460 64.8
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 8.7e-126 455.3 798 38.7
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 3.1e-123 446.8 779 39.2
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 6.9e-107 392.5 717 36.3
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 7.7e-98 362.5 304 63.2
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 4.2e-96 356.7 280 66.4
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 4.8e-84 316.6 438 45.0
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 7.2e-80 302.8 302 59.6
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.1e-71 274.6 431 42.0
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 5.5e-64 250.0 369 45.3
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.9e-56 224.9 182 64.8
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 9.5e-56 222.6 191 61.8
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.3e-49 201.4 279 47.0
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 2.6e-45 188.0 161 70.8
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 2.7e-42 177.9 135 76.3
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 2.7e-42 177.9 141 66.7
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.0e-41 176.0 153 58.8
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 2.5e-40 171.4 97 88.7
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.4e-38 165.6 134 71.6
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.5e-32 145.6 134 61.2
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 3.3e-32 144.4 107 72.9
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 5.6e-24 117.1 145 49.0
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 2.2e-20 105.1 111 51.4
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 7.4e-08 63.5 110 39.1
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 3.7e-07 61.2 139 33.8
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 1.8e-06 58.9 119 37.0


User provided reference genes

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