Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.1e-43 178.7 94 100.0
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.4e-36 155.2 94 86.2
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 6.0e-35 150.6 88 86.4
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 7.4e-33 143.7 93 78.5
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 6.2e-32 140.6 93 76.3
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 8.1e-32 140.2 93 78.5
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 5.3e-31 137.5 92 71.7
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.3e-31 137.5 92 71.7
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.3e-31 137.5 92 71.7
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 6.9e-31 137.1 91 73.6
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 9.0e-31 136.7 92 68.5
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 1.2e-30 136.3 92 71.7
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 1.5e-30 136.0 94 79.8
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.0e-30 135.6 95 70.5
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 2.6e-30 135.2 92 71.7
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 4.5e-30 134.4 89 75.3
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 5.8e-30 134.0 94 79.8
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 7.6e-30 133.7 93 69.9
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 7.6e-30 133.7 88 72.7
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.3e-29 132.9 89 74.2
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.2e-29 132.1 92 70.7
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.2e-29 132.1 92 70.7
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 2.2e-29 132.1 89 75.3
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.9e-29 131.7 93 72.0
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 4.9e-29 131.0 95 68.4
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 6.4e-29 130.6 89 71.9
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 8.4e-29 130.2 92 68.5
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 8.4e-29 130.2 92 70.7
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.1e-28 129.8 92 69.6
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 2.5e-28 128.6 92 70.7
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 2.5e-28 128.6 93 66.7
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.5e-28 128.6 92 68.5
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 3.2e-28 128.3 91 69.2
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 4.2e-28 127.9 88 69.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 5.5e-28 127.5 92 66.3
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 9.3e-28 126.7 87 70.1
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 1.2e-27 126.3 92 67.4
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 4.6e-27 124.4 87 71.3
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 4.6e-27 124.4 92 65.2
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 4.6e-27 124.4 91 70.3
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 4.6e-27 124.4 93 66.7
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 6.0e-27 124.0 94 63.8
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 6.0e-27 124.0 94 67.0
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 6.0e-27 124.0 91 68.1
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.3e-26 122.9 86 69.8
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.3e-26 122.9 87 71.3
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 2.3e-26 122.1 94 66.0
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 3.0e-26 121.7 94 66.0
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 3.9e-26 121.3 91 65.9
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.9e-25 119.0 91 63.7
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.9e-25 119.0 91 63.7
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 2.5e-25 118.6 89 64.0
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 3.3e-25 118.2 91 63.7
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 4.3e-25 117.9 92 63.0
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 5.6e-25 117.5 88 64.8
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 7.4e-25 117.1 91 63.7
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 7.4e-25 117.1 87 63.2
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 9.6e-25 116.7 89 61.8
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.3e-24 116.3 88 62.5
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.3e-24 116.3 73 78.1
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 1.3e-24 116.3 77 70.1
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.6e-24 115.9 95 64.2
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 3.7e-24 114.8 88 67.0
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 4.8e-24 114.4 89 60.7
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 8.2e-24 113.6 94 60.6
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 8.2e-24 113.6 72 73.6
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 8.2e-24 113.6 91 62.6
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 8.2e-24 113.6 88 65.9
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 8.2e-24 113.6 88 67.0
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.1e-23 113.2 88 62.5
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 63.7
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 61.5
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.4e-23 112.8 77 68.8
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.5e-22 109.4 88 63.6
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.5e-22 109.4 78 66.7
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 2.6e-22 108.6 71 71.8
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 1.3e-21 106.3 90 63.3
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 2.9e-21 105.1 69 69.6
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 3.2e-20 101.7 108 50.0
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 7.1e-20 100.5 94 54.3
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 7.1e-20 100.5 65 73.8
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 6.0e-19 97.4 50 86.0
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.0e-18 96.7 74 59.5
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 2.0e-14 82.4 79 45.6
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 3.8e-13 78.2 50 72.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 8.5e-13 77.0 78 52.6
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 8.5e-13 77.0 49 73.5
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 8.5e-13 77.0 55 63.6
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 2.5e-12 75.5 51 68.6
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.1e-09 66.6 93 43.0
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 2.0e-09 65.9 41 68.3
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 4.1e-07 58.2 46 60.9


User provided reference genes

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