Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026897 Carpinus fangiana HOM05D001842 ORTHO05D125724 0.0e+00 2021.1 1425 100.0
Haze_27037 Corylus avellana HOM05D001939 ORTHO05D002051 7.0e-10 71.2 87 37.9
Nitab4.5_0001467g0060 Nicotiana tabacum HOM05D001842 ORTHO05D001849 2.0e-09 69.7 129 30.2
Solyc02g082540.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 2.7e-09 69.3 129 29.5
Sopen02g027220 Solanum pennellii HOM05D001842 ORTHO05D001849 2.7e-09 69.3 129 29.5
CBR_g4194 Chara braunii HOM05D001842 ORTHO05D001849 1.0e-08 67.4 125 34.4
Cfa027101 Carpinus fangiana HOM05D001842 ORTHO05D002051 1.7e-08 66.6 288 27.4
BcaB03g14302 Brassica carinata HOM05D001842 ORTHO05D001849 3.9e-08 65.5 128 32.0
CSS0027675 Camellia sinensis var. sinensis HOM05D001939 ORTHO05D002051 3.9e-08 65.5 81 37.0
Prupe.8G179600 Prunus persica HOM05D001842 ORTHO05D001849 5.0e-08 65.1 118 33.1
COL.COLO4_22557 Corchorus olitorius HOM05D001842 ORTHO05D001849 8.6e-08 64.3 146 30.8
ECA100G0010 Erigeron canadensis HOM05D001939 ORTHO05D002051 8.6e-08 64.3 82 35.4
MD11G1210300 Malus domestica HOM05D001939 ORTHO05D002051 8.6e-08 64.3 139 28.1
A07p15500 Brassica napus HOM05D001842 ORTHO05D001849 1.1e-07 63.9 128 32.0
BraA07t29291Z Brassica rapa HOM05D001842 ORTHO05D001849 1.1e-07 63.9 128 32.0
Solyc02g038812.1 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.1e-07 63.9 112 32.1
MD06G1007400 Malus domestica HOM05D001842 ORTHO05D001849 1.9e-07 63.2 143 29.4
Manes.03G136906 Manihot esculenta HOM05D001939 ORTHO05D002051 1.9e-07 63.2 108 32.4
Nitab4.5_0000467g0080 Nicotiana tabacum HOM05D001842 ORTHO05D001849 1.9e-07 63.2 176 26.1
RcHm_v2.0_Chr5g0041321 Rosa chinensis HOM05D001939 ORTHO05D002051 1.9e-07 63.2 82 35.4
A06p16700 Brassica napus HOM05D001842 ORTHO05D001849 2.5e-07 62.8 132 31.1
BraA06t24785Z Brassica rapa HOM05D001842 ORTHO05D001849 2.5e-07 62.8 132 31.1
Peaxi162Scf00580g00016 Petunia axillaris HOM05D001842 ORTHO05D001849 2.5e-07 62.8 171 29.2
BcaC06g34833 Brassica carinata HOM05D001842 ORTHO05D001849 3.3e-07 62.4 128 31.2
C05p19300 Brassica napus HOM05D001842 ORTHO05D001849 3.3e-07 62.4 132 31.1
C07p22830 Brassica napus HOM05D001842 ORTHO05D001849 3.3e-07 62.4 128 31.2
BolC5t30637H Brassica oleracea HOM05D001842 ORTHO05D001849 3.3e-07 62.4 132 31.1
BolC7t42821H Brassica oleracea HOM05D001842 ORTHO05D001849 3.3e-07 62.4 128 31.2
Ciclev10024733m.g Citrus clementina HOM05D001842 ORTHO05D001849 3.3e-07 62.4 209 27.3
Sp1g18460 Schrenkiella parvula HOM05D001842 ORTHO05D001849 3.3e-07 62.4 128 31.2
CAN.G1238.17 Capsicum annuum HOM05D001842 ORTHO05D001849 5.6e-07 61.6 114 27.2
FvH4_2g16750 Fragaria vesca HOM05D001842 ORTHO05D001849 5.6e-07 61.6 139 33.1
FAN24G0597 Fragaria x ananassa HOM05D001842 ORTHO05D001849 5.6e-07 61.6 139 33.1
Manes.15G066500 Manihot esculenta HOM05D001939 ORTHO05D002051 5.6e-07 61.6 129 31.8
Prupe.4G222700 Prunus persica HOM05D001939 ORTHO05D002051 5.6e-07 61.6 117 28.2
Thecc.01G004600 Theobroma cacao HOM05D001842 ORTHO05D001849 5.6e-07 61.6 115 32.2
Carub.0001s2021 Capsella rubella HOM05D001842 ORTHO05D001849 7.3e-07 61.2 127 30.7
Thhalv10006674m.g Eutrema salsugineum HOM05D001842 ORTHO05D001849 7.3e-07 61.2 128 31.2
Medtr1g018480 Medicago truncatula HOM05D001842 ORTHO05D001849 7.3e-07 61.2 138 33.3
Actinidia22891 Actinidia chinensis HOM05D001842 ORTHO05D001849 9.5e-07 60.8 97 32.0
Zm00001eb225790 Zea mays HOM05D001939 ORTHO05D002051 9.5e-07 60.8 112 30.4
Cfa025724 Carpinus fangiana HOM05D001842 ORTHO05D002051 1.2e-06 60.5 113 33.6
Psat5g176000 Pisum sativum HOM05D001939 ORTHO05D002051 1.2e-06 60.5 82 31.7
Sopen02g012560 Solanum pennellii HOM05D001842 ORTHO05D001849 1.2e-06 60.5 181 27.1
Thecc.07G029100 Theobroma cacao HOM05D001939 ORTHO05D002051 1.2e-06 60.5 82 31.7
Gohir.D01G070400 Gossypium hirsutum HOM05D001939 ORTHO05D002051 1.6e-06 60.1 82 32.9
Gorai.002G093200 Gossypium raimondii HOM05D001939 ORTHO05D002051 1.6e-06 60.1 82 32.9
Hund06365 Selenicereus undatus HOM05D001842 ORTHO05D001849 1.6e-06 60.1 102 34.3
MD03G1194000 Malus domestica HOM05D001939 ORTHO05D002051 2.1e-06 59.7 139 27.3
Sc02g0009180 Simmondsia chinensis HOM05D001842 ORTHO05D001849 2.1e-06 59.7 129 32.6
MSTRG.3637 Avicennia marina HOM05D001842 ORTHO05D001849 2.8e-06 59.3 146 29.5
ClCG01G009930 Citrullus lanatus HOM05D001939 ORTHO05D002051 2.8e-06 59.3 82 31.7
Sabra05G0084600 Salix brachista HOM05D001842 ORTHO05D001849 2.8e-06 59.3 137 29.9
Gohir.A01G084000 Gossypium hirsutum HOM05D001939 ORTHO05D002051 3.6e-06 58.9 82 32.9
PSO541G1162 Papaver somniferum HOM05D001842 ORTHO05D001849 3.6e-06 58.9 121 32.2
PSO675G7298 Papaver somniferum HOM05D001842 ORTHO05D001849 3.6e-06 58.9 121 32.2
PGR031G3577 Punica granatum HOM05D001939 ORTHO05D002051 3.6e-06 58.9 130 26.9
PGR093G0003 Punica granatum HOM05D001939 ORTHO05D002051 3.6e-06 58.9 130 26.9
AL1G33750 Arabidopsis lyrata HOM05D001842 ORTHO05D001849 4.7e-06 58.5 131 29.8
Cc07_g11940 Coffea canephora HOM05D001842 ORTHO05D001849 4.7e-06 58.5 96 35.4
Gorai.001G199400 Gossypium raimondii HOM05D001842 ORTHO05D001849 4.7e-06 58.5 335 26.3
Lj2C501G4 Lonicera japonica HOM05D001842 ORTHO05D001849 4.7e-06 58.5 107 31.8
Actinidia35368 Actinidia chinensis HOM05D001939 ORTHO05D002051 6.2e-06 58.2 108 31.5
arahy.Tifrunner.gnm1.ann1.1FV09I Arachis hypogaea HOM05D001842 ORTHO05D001849 6.2e-06 58.2 130 28.5
arahy.Tifrunner.gnm1.ann1.649J27 Arachis hypogaea HOM05D001842 ORTHO05D001849 6.2e-06 58.2 130 28.5
MSTRG.15602 Avicennia marina HOM05D001842 ORTHO05D001849 6.2e-06 58.2 284 21.8
CsaV3_1G045850 Cucumis sativus L. HOM05D001939 ORTHO05D002051 6.2e-06 58.2 82 31.7
RcHm_v2.0_Chr6g0280871 Rosa chinensis HOM05D001842 ORTHO05D001849 6.2e-06 58.2 146 29.5
BcaB03g12856 Brassica carinata HOM05D001842 ORTHO05D001849 8.1e-06 57.8 124 30.6
FAN18G3820 Fragaria x ananassa HOM05D001842 ORTHO05D001849 8.1e-06 57.8 111 32.4
Potri.005G102200 Populus trichocarpa HOM05D001842 ORTHO05D001849 8.1e-06 57.8 137 28.5


User provided reference genes

Program Settings