Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015114 Carpinus fangiana HOM05D000074 ORTHO05D126239 4.8e-45 184.1 91 100.0
Cfa005858 Carpinus fangiana HOM05D000074 ORTHO05D000696 1.7e-10 69.3 33 90.9
Haze_04992 Corylus avellana HOM05D000074 ORTHO05D000696 1.7e-10 69.3 33 90.9
Medtr7g109200 Medicago truncatula HOM05D000074 ORTHO05D000696 2.5e-09 65.5 33 81.8
Psat3g021080 Pisum sativum HOM05D000074 ORTHO05D000696 4.2e-09 64.7 33 81.8
TPR.G9610 Trifolium pratense HOM05D000074 ORTHO05D000696 4.2e-09 64.7 33 81.8
arahy.Tifrunner.gnm1.ann1.T08SBC Arachis hypogaea HOM05D000074 ORTHO05D000696 7.2e-09 63.9 33 81.8
CiPaw.08G092400 Carya illinoinensis HOM05D000074 ORTHO05D000696 7.2e-09 63.9 35 77.1
Glyma.03G217500 Glycine max HOM05D000074 ORTHO05D000696 7.2e-09 63.9 33 81.8
COL.COLO4_23286 Corchorus olitorius HOM05D000074 ORTHO05D000696 9.4e-09 63.5 33 81.8
Duzib138G0334 Durio zibethinus HOM05D000074 ORTHO05D000696 9.4e-09 63.5 33 81.8
Thecc.01G307900 Theobroma cacao HOM05D000074 ORTHO05D000696 9.4e-09 63.5 33 81.8
Atru.chr5.1070 Acer truncatum HOM05D000074 ORTHO05D000696 1.2e-08 63.2 33 78.8
Potri.002G200300 Populus trichocarpa HOM05D000074 ORTHO05D000696 1.2e-08 63.2 33 78.8
arahy.Tifrunner.gnm1.ann1.LNBI6T Arachis hypogaea HOM05D000074 ORTHO05D000696 1.6e-08 62.8 33 78.8
Phvul.001G211000 Phaseolus vulgaris HOM05D000074 ORTHO05D000696 1.6e-08 62.8 33 78.8
Ca_09195_v3 Cicer arietinum L. HOM05D000074 ORTHO05D000696 2.7e-08 62.0 33 78.8
Glyma.19G214100 Glycine max HOM05D000074 ORTHO05D000696 4.7e-08 61.2 31 83.9
Gohir.A12G128000 Gossypium hirsutum HOM05D000074 ORTHO05D000696 4.7e-08 61.2 33 78.8
Gohir.D12G131700 Gossypium hirsutum HOM05D000074 ORTHO05D000696 4.7e-08 61.2 33 78.8
Gorai.008G142900 Gossypium raimondii HOM05D000074 ORTHO05D000696 4.7e-08 61.2 33 78.8
Cpa.g.sc151.45 Carica papaya HOM05D000074 ORTHO05D000696 6.1e-08 60.8 33 75.8
Lalb_Chr04g0259901 Lupinus albus HOM05D000074 ORTHO05D000696 6.1e-08 60.8 33 72.7
QL12p028739 Quercus lobata HOM05D000074 ORTHO05D000696 6.1e-08 60.8 33 75.8
VMungo1383G0378 Vigna mungo HOM05D000074 ORTHO05D000696 6.1e-08 60.8 33 75.8
Duzib211G0306 Durio zibethinus HOM05D000074 ORTHO05D000696 7.9e-08 60.5 33 75.8
TWI75G1329 Tripterygium wilfordii HOM05D000074 ORTHO05D000696 7.9e-08 60.5 33 75.8
Sabra14G0093000 Salix brachista HOM05D000074 ORTHO05D000696 1.0e-07 60.1 33 72.7
Lj1g0000017 Lotus japonicus HOM05D000074 ORTHO05D000696 1.4e-07 59.7 33 75.8
Potri.014G125100 Populus trichocarpa HOM05D000074 ORTHO05D000696 1.4e-07 59.7 33 72.7
CANSAT25G3203 Cannabis sativa HOM05D000074 ORTHO05D000696 1.8e-07 59.3 33 69.7
THA.LOC104801292 Tarenaya hassleriana HOM05D000074 ORTHO05D000696 1.8e-07 59.3 34 67.6
Aa31LG5G1850 Aethionema arabicum HOM05D000074 ORTHO05D000696 2.3e-07 58.9 34 67.6
THA.LOC104825951 Tarenaya hassleriana HOM05D000074 ORTHO05D000696 2.3e-07 58.9 34 67.6
Ciclev10018574m.g Citrus clementina HOM05D000074 ORTHO05D000696 3.9e-07 58.2 33 75.8
PSO170G1690 Papaver somniferum HOM05D000074 ORTHO05D000696 3.9e-07 58.2 45 60.0
ClCG10G011170 Citrullus lanatus HOM05D000074 ORTHO05D000696 5.1e-07 57.8 33 69.7
Manes.05G000900 Manihot esculenta HOM05D000074 ORTHO05D000696 5.1e-07 57.8 33 66.7
Psat0s3354g0080 Pisum sativum HOM05D000518 ORTHO05D000737 5.1e-07 57.8 33 75.8
Psat4g081200 Pisum sativum HOM05D003492 ORTHO05D000696 5.1e-07 57.8 33 75.8
MELO3C017935.2 Cucumis melo HOM05D000074 ORTHO05D000696 1.1e-06 56.6 33 66.7
CsaV3_4G001030 Cucumis sativus L. HOM05D000074 ORTHO05D000696 1.1e-06 56.6 33 66.7
Sed0001267 Sechium edule HOM05D000074 ORTHO05D000696 2.0e-06 55.8 33 66.7
Oeu048315.1 Olea europaea HOM05D000074 ORTHO05D000696 2.6e-06 55.5 47 55.3
Lj1A21T73 Lonicera japonica HOM05D000074 ORTHO05D000696 3.3e-06 55.1 47 55.3
Aqoxy2G02844 Aquilegia oxysepala HOM05D000074 ORTHO05D000696 4.4e-06 54.7 43 60.5
AL1G12110 Arabidopsis lyrata HOM05D000074 ORTHO05D000696 5.7e-06 54.3 35 65.7
ECA247G1170 Erigeron canadensis HOM05D000074 ORTHO05D000696 5.7e-06 54.3 47 55.3
BcaNung06749 Brassica carinata HOM05D000074 ORTHO05D000696 9.7e-06 53.5 35 65.7
A10p01430 Brassica napus HOM05D000074 ORTHO05D000696 9.7e-06 53.5 35 65.7
C05p01400 Brassica napus HOM05D000074 ORTHO05D000696 9.7e-06 53.5 35 65.7
BolC5t28922H Brassica oleracea HOM05D000074 ORTHO05D000696 9.7e-06 53.5 35 65.7
BraA10t42418Z Brassica rapa HOM05D000074 ORTHO05D000696 9.7e-06 53.5 35 65.7
CARHR002030 Cardamine hirsuta HOM05D000074 ORTHO05D000696 9.7e-06 53.5 35 65.7
Thhalv10006597m.g Eutrema salsugineum HOM05D000074 ORTHO05D000696 9.7e-06 53.5 33 63.6
Sp1g01710 Schrenkiella parvula HOM05D000074 ORTHO05D000696 9.7e-06 53.5 33 63.6
Hund05459 Selenicereus undatus HOM05D000074 ORTHO05D000696 9.7e-06 53.5 46 58.7
Zm00001eb410030 Zea mays HOM05D000074 ORTHO05D000696 9.7e-06 53.5 32 68.8


User provided reference genes

Program Settings