Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014040 Carpinus fangiana HOM05D025300 ORTHO05D005639 1.8e-75 287.0 316 100.0
Haze_22743 Corylus avellana HOM05D025300 ORTHO05D005639 7.1e-56 221.9 333 75.1
Cfa014041 Carpinus fangiana HOM05D025300 ORTHO05D005639 5.7e-45 185.7 294 64.3
Cfa014042 Carpinus fangiana HOM05D025300 ORTHO05D005639 5.4e-19 99.4 72 76.4
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 2.1e-15 87.4 258 43.0
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.7e-15 86.3 257 41.2
QL02p013717 Quercus lobata HOM05D008201 ORTHO05D005639 7.0e-11 72.4 324 57.1
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 4.5e-10 69.7 249 38.2
CiPaw.07G140900 Carya illinoinensis HOM05D008201 ORTHO05D005639 8.6e-09 65.5 69 59.4
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 1.1e-08 65.1 67 59.7
Gohir.A05G181000 Gossypium hirsutum HOM05D008201 ORTHO05D005639 1.5e-08 64.7 65 55.4
Gorai.009G189500 Gossypium raimondii HOM05D008201 ORTHO05D005639 3.3e-08 63.5 65 55.4
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 7.2e-08 62.4 46 63.0
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 7.2e-08 62.4 254 37.4
Thecc.08G055500 Theobroma cacao HOM05D008201 ORTHO05D005639 1.2e-07 61.6 67 58.2
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 1.6e-07 61.2 49 61.2
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 3.6e-07 60.1 228 49.6
FAN20G0338 Fragaria x ananassa HOM05D008201 ORTHO05D005639 4.7e-07 59.7 69 49.3
Sed0012310 Sechium edule HOM05D024756 ORTHO05D005639 6.1e-07 59.3 50 66.0
TWI36G0214 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 6.1e-07 59.3 63 58.7
Duzib093G2238 Durio zibethinus HOM05D008201 ORTHO05D005639 8.0e-07 58.9 47 59.6
Hma1.2p1_1100F.1_g257080 Hydrangea macrophylla HOM05D008201 ORTHO05D005639 8.0e-07 58.9 68 52.9
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 8.0e-07 58.9 223 44.4
FAN15G2778 Fragaria x ananassa HOM05D008201 ORTHO05D005639 1.0e-06 58.5 86 44.2
FAN27G2977 Fragaria x ananassa HOM05D008201 ORTHO05D005639 1.0e-06 58.5 67 50.7
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 1.0e-06 58.5 74 51.4
Nn6g31832 Nelumbo nucifera HOM05D008201 ORTHO05D005639 1.4e-06 58.2 63 52.4
Prupe.1G356400 Prunus persica HOM05D008201 ORTHO05D005639 1.8e-06 57.8 226 44.2
TWI12G0216 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 1.8e-06 57.8 37 81.1
vmacro04391 Vaccinium macrocarpon HOM05D008201 ORTHO05D005639 2.3e-06 57.4 49 65.3
COL.COLO4_21609 Corchorus olitorius HOM05D008201 ORTHO05D005639 4.0e-06 56.6 65 53.8
Duzib041G0568 Durio zibethinus HOM05D008201 ORTHO05D005639 4.0e-06 56.6 57 57.9
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 4.0e-06 56.6 49 59.2
Duzib116G0781 Durio zibethinus HOM05D008201 ORTHO05D005639 5.2e-06 56.2 42 64.3
HanXRQChr08g0216051 Helianthus annuus HOM05D008201 ORTHO05D005639 5.2e-06 56.2 111 61.3
TAR381G0904 Trochodendron aralioides HOM05D008201 ORTHO05D005639 6.8e-06 55.8 68 54.4


User provided reference genes

Program Settings