Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 1.9e-270 935.3 465 100.0
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 4.7e-197 691.4 464 71.8
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 7.5e-195 684.1 466 70.8
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 4.2e-190 668.3 465 70.3
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 5.2e-188 661.4 465 70.3
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 3.4e-187 658.7 465 67.3
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 5.7e-187 657.9 465 68.6
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 7.5e-187 657.5 466 69.5
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 8.3e-186 654.1 461 67.5
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 2.4e-185 652.5 451 71.0
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 4.1e-185 651.7 455 69.2
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 7.0e-185 651.0 469 68.2
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.6e-184 648.3 450 67.8
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 2.3e-183 646.0 463 66.5
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.9e-183 645.6 450 67.6
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 3.3e-182 642.1 463 67.2
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 3.6e-181 638.6 461 66.6
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 4.7e-181 638.3 466 66.5
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 1.4e-180 636.7 464 66.6
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 3.1e-180 635.6 465 65.4
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 8.9e-180 634.0 516 62.2
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.6e-179 632.5 452 66.2
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 9.8e-179 630.6 463 65.0
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 1.4e-177 626.7 453 67.5
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 4.1e-177 625.2 535 60.0
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 9.2e-177 624.0 460 64.1
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 3.5e-176 622.1 462 63.9
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 4.6e-176 621.7 456 65.8
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 7.8e-176 620.9 440 68.4
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 3.0e-175 619.0 459 65.1
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 3.3e-174 615.5 459 64.7
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 5.6e-174 614.8 457 64.8
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.6e-173 613.2 424 70.8
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 2.1e-173 612.8 450 65.6
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 2.1e-173 612.8 471 63.7
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 2.8e-173 612.5 460 64.8
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 1.4e-172 610.1 457 63.9
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 4.0e-172 608.6 464 63.8
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 6.8e-172 607.8 445 66.5
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 8.9e-172 607.4 463 63.5
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 4.4e-171 605.1 469 62.7
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 5.8e-171 604.7 454 64.3
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 5.8e-171 604.7 459 64.5
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 7.5e-171 604.4 459 63.8
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 9.8e-171 604.0 457 63.2
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 9.8e-171 604.0 457 63.2
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 4.9e-170 601.7 447 65.3
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.4e-170 601.3 457 63.5
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 7.1e-169 597.8 464 63.1
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 5.1e-167 591.7 451 65.0
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 5.1e-167 591.7 450 62.4
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.5e-166 590.1 451 64.5
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.9e-166 589.7 459 63.4
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 5.6e-166 588.2 463 61.1
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 1.6e-165 586.6 561 55.1
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.3e-162 577.0 457 60.4
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 1.3e-162 577.0 455 60.7
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 2.9e-162 575.9 457 59.5
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 3.7e-162 575.5 464 61.0
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 4.9e-162 575.1 449 62.1
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 7.1e-161 571.2 457 59.7
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 2.1e-160 569.7 460 61.5
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 3.3e-158 562.4 437 66.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.3e-158 562.0 458 59.4
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.3e-158 562.0 458 59.4
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 5.6e-158 561.6 429 63.2
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 1.2e-157 560.5 458 59.2
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 1.6e-157 560.1 462 57.8
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 2.1e-157 559.7 458 59.2
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 1.1e-156 557.4 458 59.0
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 4.0e-156 555.4 458 59.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 8.9e-156 554.3 458 58.7
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 8.9e-156 554.3 433 61.9
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 4.4e-155 552.0 458 58.5
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 4.9e-154 548.5 458 58.7
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.4e-154 548.1 397 65.7
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 1.1e-153 547.4 458 57.0
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 1.1e-153 547.4 458 56.8
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 2.4e-153 546.2 458 57.0
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 2.4e-153 546.2 458 57.0
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 9.3e-153 544.3 459 57.1
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 4.6e-152 542.0 384 69.8
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 5.1e-151 538.5 458 56.6
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 1.9e-150 536.6 450 55.3
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 3.1e-148 529.3 393 64.4
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 5.3e-148 528.5 468 54.5
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 3.8e-146 522.3 396 65.2
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.9e-145 520.0 390 63.6
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 1.9e-142 510.0 471 56.3
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 1.9e-137 493.4 393 60.1
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 2.1e-136 490.0 468 52.6
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 4.8e-133 478.8 310 74.2
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 3.9e-127 459.1 334 67.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.1e-126 457.6 457 52.1
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 5.1e-119 432.2 474 50.6
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 8.7e-119 431.4 310 68.4
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 2.2e-109 400.2 396 49.7
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 4.1e-108 396.0 306 63.7
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 5.0e-90 335.9 313 54.0
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 8.8e-87 325.1 264 62.1
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 8.8e-87 325.1 264 62.1
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 4.4e-78 296.2 462 37.2
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 8.3e-69 265.4 207 66.7
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 2.4e-68 263.8 215 62.8
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 7.8e-67 258.8 184 71.2
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 7.5e-62 242.3 367 38.1
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.3e-32 145.2 114 61.4
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 4.2e-28 130.2 94 66.0
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.3e-21 108.6 72 72.2
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 8.4e-21 105.9 72 70.8
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.9e-17 94.7 80 58.8


User provided reference genes

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