Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g11180 Coffea canephora HOM05D007726 ORTHO05D008819 2.1e-28 128.3 62 100.0
Cc10_g11210 Coffea canephora HOM05D007726 ORTHO05D008819 3.1e-19 97.8 56 80.4
Dinv41784 Davidia involucrata HOM05D007726 ORTHO05D008819 3.0e-14 81.3 56 67.9
Atru.chr13.2339 Acer truncatum HOM05D007726 ORTHO05D008819 5.0e-14 80.5 56 62.5
Lj7A388T90 Lonicera japonica HOM05D007726 ORTHO05D008819 5.0e-14 80.5 56 67.9
Dinv24637 Davidia involucrata HOM05D007726 ORTHO05D008819 1.5e-13 79.0 56 64.3
Lj7C388T5 Lonicera japonica HOM05D007726 ORTHO05D008819 1.5e-13 79.0 56 62.5
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 4.3e-13 77.4 56 62.5
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 1.2e-12 75.9 56 60.7
CiPaw.08G003800 Carya illinoinensis HOM05D007726 ORTHO05D008819 2.1e-12 75.1 56 64.3
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 2.1e-12 75.1 56 60.7
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 3.6e-12 74.3 56 60.7
Prupe.1G556700 Prunus persica HOM05D007726 ORTHO05D008819 3.6e-12 74.3 56 58.9
Ciclev10020327m.g Citrus clementina HOM05D007726 ORTHO05D008819 4.7e-12 73.9 56 58.9
QL02p023649 Quercus lobata HOM05D007726 ORTHO05D008819 4.7e-12 73.9 56 58.9
CANSAT25G2565 Cannabis sativa HOM05D007726 ORTHO05D008819 6.2e-12 73.6 56 58.9
Cpa.g.sc30.96 Carica papaya HOM05D007726 ORTHO05D008819 6.2e-12 73.6 56 55.4
CiPaw.07G234400 Carya illinoinensis HOM05D007726 ORTHO05D008819 6.2e-12 73.6 56 64.3
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 8.1e-12 73.2 56 57.1
RcHm_v2.0_Chr7g0231221 Rosa chinensis HOM05D007726 ORTHO05D008819 1.1e-11 72.8 56 60.7
FvH4_5g31300 Fragaria vesca HOM05D007726 ORTHO05D008819 1.4e-11 72.4 56 60.7
FAN18G2255 Fragaria x ananassa HOM05D007726 ORTHO05D008819 1.4e-11 72.4 56 60.7
Ciclev10020371m.g Citrus clementina HOM05D007726 ORTHO05D008819 2.3e-11 71.6 56 58.9
MSTRG.25451 Avicennia marina HOM05D007726 ORTHO05D008819 4.0e-11 70.9 56 53.6
ClCG09G010150 Citrullus lanatus HOM05D007726 ORTHO05D008819 4.0e-11 70.9 56 53.6
Lsat_1_v5_gn_4_28421 Lactuca sativa HOM05D007726 ORTHO05D008819 5.2e-11 70.5 56 57.1
Actinidia34726 Actinidia chinensis HOM05D007726 ORTHO05D008819 6.8e-11 70.1 56 57.1
MELO3C024088.2 Cucumis melo HOM05D007726 ORTHO05D008819 6.8e-11 70.1 56 55.4
CsaV3_7G024580 Cucumis sativus L. HOM05D007726 ORTHO05D008819 6.8e-11 70.1 56 55.4
RcHm_v2.0_Chr7g0225531 Rosa chinensis HOM05D007726 ORTHO05D008819 8.9e-11 69.7 57 59.6
Sed0014390 Sechium edule HOM05D007726 ORTHO05D008819 8.9e-11 69.7 56 57.1
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.5e-10 68.9 56 51.8
FvH4_5g30670 Fragaria vesca HOM05D007726 ORTHO05D008819 2.0e-10 68.6 57 59.6
FAN08G0648 Fragaria x ananassa HOM05D007726 ORTHO05D008819 2.0e-10 68.6 57 59.6
FAN18G4305 Fragaria x ananassa HOM05D007726 ORTHO05D008819 2.0e-10 68.6 57 59.6
Eucgr.F02895 Eucalyptus grandis HOM05D007726 ORTHO05D008819 2.6e-10 68.2 56 55.4
FAN13G1334 Fragaria x ananassa HOM05D007726 ORTHO05D008819 4.4e-10 67.4 57 57.9
HanXRQChr17g0565271 Helianthus annuus HOM05D007726 ORTHO05D008819 7.5e-10 66.6 56 50.0
Potri.013G104100 Populus trichocarpa HOM05D007726 ORTHO05D008819 7.5e-10 66.6 56 55.4
SGA_v2.0_scaffold118G32546 Striga asiatica HOM05D007726 ORTHO05D008819 7.5e-10 66.6 59 52.5
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 1.3e-09 65.9 56 53.6
Sabra13G0090000 Salix brachista HOM05D007726 ORTHO05D008819 1.7e-09 65.5 56 55.4
Hund16767 Selenicereus undatus HOM05D007726 ORTHO05D008819 1.7e-09 65.5 56 50.0
RcHm_v2.0_Chr7g0218801 Rosa chinensis HOM05D007726 ORTHO05D008819 2.2e-09 65.1 57 56.1
ECA234G1595 Erigeron canadensis HOM05D007726 ORTHO05D008819 3.7e-09 64.3 56 50.0
TWI14G0263 Tripterygium wilfordii HOM05D007726 ORTHO05D008819 3.7e-09 64.3 55 54.5
RcHm_v2.0_Chr7g0226391 Rosa chinensis HOM05D007726 ORTHO05D008819 1.4e-08 62.4 57 52.6
Sc23g0001620 Simmondsia chinensis HOM05D007726 ORTHO05D008819 2.3e-06 55.1 55 40.0


User provided reference genes

Program Settings