Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g18050 Coffea canephora HOM05D005623 ORTHO05D007130 2.7e-73 278.5 135 100.0
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 2.2e-46 189.1 97 92.8
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 7.8e-44 180.6 97 86.6
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 1.7e-43 179.5 97 84.5
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 2.3e-43 179.1 97 85.6
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 2.3e-43 179.1 97 85.6
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 3.0e-43 178.7 97 84.5
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 3.0e-43 178.7 97 84.5
CsaV3_UNG058470 Cucumis sativus L. HOM05D005623 ORTHO05D007130 3.0e-43 178.7 97 84.5
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 3.9e-43 178.3 93 89.2
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 8.6e-43 177.2 97 83.5
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 1.1e-42 176.8 97 84.5
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 1.1e-42 176.8 93 88.2
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 1.5e-42 176.4 93 87.1
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 1.5e-42 176.4 97 84.5
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 3.3e-42 175.3 97 83.5
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 5.6e-42 174.5 97 80.4
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 5.6e-42 174.5 97 83.5
Lj4A313G21 Lonicera japonica HOM05D005623 ORTHO05D007130 7.3e-42 174.1 96 84.4
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 7.3e-42 174.1 97 82.5
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 9.5e-42 173.7 97 83.5
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 1.2e-41 173.3 97 82.5
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 1.2e-41 173.3 97 80.4
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 1.6e-41 172.9 97 81.4
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 1.6e-41 172.9 128 68.0
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 2.8e-41 172.2 97 82.5
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 2.8e-41 172.2 93 83.9
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 2.8e-41 172.2 93 86.0
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 3.6e-41 171.8 97 81.4
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 3.6e-41 171.8 93 84.9
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 3.6e-41 171.8 97 79.4
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 3.6e-41 171.8 93 86.0
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.7e-41 171.4 97 81.4
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 4.7e-41 171.4 93 84.9
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 4.7e-41 171.4 97 78.4
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 4.7e-41 171.4 97 81.4
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 6.2e-41 171.0 97 79.4
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 6.2e-41 171.0 93 83.9
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 6.2e-41 171.0 93 83.9
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 6.2e-41 171.0 97 80.4
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 8.1e-41 170.6 97 80.4
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 8.1e-41 170.6 97 81.4
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 8.1e-41 170.6 97 81.4
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 8.1e-41 170.6 97 81.4
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 8.1e-41 170.6 97 81.4
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 1.1e-40 170.2 97 81.4
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 1.4e-40 169.9 93 83.9
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 1.8e-40 169.5 93 81.7
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 1.8e-40 169.5 93 82.8
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 1.8e-40 169.5 92 83.7
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 1.8e-40 169.5 93 83.9
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 1.8e-40 169.5 93 83.9
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 1.8e-40 169.5 93 83.9
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 2.3e-40 169.1 97 78.4
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 2.3e-40 169.1 95 80.0
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 2.3e-40 169.1 93 80.6
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 2.3e-40 169.1 91 85.7
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 3.1e-40 168.7 93 82.8
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 4.0e-40 168.3 93 82.8
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 4.0e-40 168.3 93 81.7
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 4.0e-40 168.3 93 81.7
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 4.0e-40 168.3 91 83.5
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 5.2e-40 167.9 97 79.4
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 8.9e-40 167.2 93 81.7
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 1.5e-39 166.4 95 78.9
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 1.5e-39 166.4 97 78.4
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 1.5e-39 166.4 93 81.7
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 2.0e-39 166.0 93 81.7
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 2.0e-39 166.0 93 81.7
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 2.0e-39 166.0 93 81.7
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 2.0e-39 166.0 93 81.7
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 4.4e-39 164.9 93 80.6
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 4.4e-39 164.9 93 80.6
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 4.4e-39 164.9 93 80.6
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 4.4e-39 164.9 97 77.3
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 4.4e-39 164.9 93 80.6
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 5.8e-39 164.5 93 79.6
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 5.8e-39 164.5 93 79.6
ClCG03G015820 Citrullus lanatus HOM05D005623 ORTHO05D007130 9.9e-39 163.7 126 65.9
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 9.9e-39 163.7 93 80.6
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 1.3e-38 163.3 97 73.2
Cpa.g.sc78.66 Carica papaya HOM05D005623 ORTHO05D007130 1.7e-38 162.9 93 79.6
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 6.4e-38 161.0 93 76.3
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 1.9e-37 159.5 97 76.3
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 1.9e-37 159.5 95 75.8
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 5.4e-37 157.9 93 78.5
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 5.4e-37 157.9 93 76.3
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 1.2e-36 156.8 93 74.2
Nn1g05571 Nelumbo nucifera HOM05D005623 ORTHO05D007130 6.0e-36 154.5 95 73.7
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 3.9e-35 151.8 97 70.1
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 1.5e-31 139.8 91 70.3
Sabra06G0118200 Salix brachista HOM05D005623 ORTHO05D007130 1.5e-31 139.8 76 82.9
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 5.8e-31 137.9 76 84.2
MD02G1074000 Malus domestica HOM05D005623 ORTHO05D007130 9.9e-31 137.1 77 81.8
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 2.2e-30 136.0 91 67.0
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 8.4e-30 134.0 90 64.4
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 5.4e-29 131.3 107 57.9
Oeu000326.2 Olea europaea HOM05D005623 ORTHO05D007130 3.3e-26 122.1 63 84.1
Psat7g019640 Pisum sativum HOM05D005623 ORTHO05D007130 1.2e-23 113.6 62 77.4
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 1.5e-23 113.2 97 63.9
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 6.4e-22 107.8 104 49.0
PRCOL_00000211 Prasinoderma coloniale HOM05D005623 ORTHO05D007130 7.6e-15 84.3 88 48.9
PSO210G4788 Papaver somniferum HOM05D005623 ORTHO05D007130 4.9e-14 81.6 78 52.6
SEGI_18957 Sequoiadendron giganteum HOM05D005623 ORTHO05D007130 2.4e-13 79.3 49 67.3
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 3.3e-10 68.9 69 52.2
Psat7g019600 Pisum sativum HOM05D005623 ORTHO05D007130 6.2e-09 64.7 60 55.0
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 4.0e-08 62.0 69 47.8
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 5.3e-08 61.6 110 37.3


User provided reference genes

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