Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g30870 Coffea canephora HOM05D009871 ORTHO05D011190 6.6e-78 294.3 184 100.0
Oeu038455.1 Olea europaea HOM05D009871 ORTHO05D011190 7.7e-18 94.7 182 53.8
MSTRG.20459 Avicennia marina HOM05D009871 ORTHO05D011190 1.9e-16 90.1 124 47.6
TAR365G0385 Trochodendron aralioides HOM05D015734 ORTHO05D011190 4.2e-16 89.0 108 46.3
Dinv20288 Davidia involucrata HOM05D009871 ORTHO05D011190 5.1e-14 82.0 100 47.0
Ah.06g192070 Amaranthus hybridus HOM05D009871 ORTHO05D011190 3.3e-13 79.3 115 44.3
Rhsim07G0074400 Rhododendron simsii HOM05D009871 ORTHO05D011190 3.7e-12 75.9 114 43.9
Solyc01g097170.3 Solanum lycopersicum HOM05D009871 ORTHO05D011190 4.8e-12 75.5 123 45.5
Sopen01g040840 Solanum pennellii HOM05D009871 ORTHO05D011190 6.3e-12 75.1 123 45.5
PGSC0003DMG400027513 Solanum tuberosum HOM05D009871 ORTHO05D011190 6.3e-12 75.1 123 45.5
Sc20g0000440 Simmondsia chinensis HOM05D009871 ORTHO05D011190 8.2e-12 74.7 119 42.9
AUR62004897 Chenopodium quinoa HOM05D000007 ORTHO05D015825 2.4e-11 73.2 120 40.0
Lsat_1_v5_gn_8_25121 Lactuca sativa HOM05D009871 ORTHO05D011190 2.4e-11 73.2 133 41.4
Peaxi162Scf00282g00616 Petunia axillaris HOM05D009871 ORTHO05D011190 2.4e-11 73.2 114 43.9
TAR636G1677 Trochodendron aralioides HOM05D015734 ORTHO05D011190 2.4e-11 73.2 111 38.7
ECA238G3423 Erigeron canadensis HOM05D009871 ORTHO05D011190 3.1e-11 72.8 105 45.7
Nitab4.5_0002247g0040 Nicotiana tabacum HOM05D009871 ORTHO05D011190 3.1e-11 72.8 92 51.1
Nitab4.5_0010168g0010 Nicotiana tabacum HOM05D009871 ORTHO05D011190 5.3e-11 72.0 91 46.2
vmacro13814 Vaccinium macrocarpon HOM05D009871 ORTHO05D011190 5.3e-11 72.0 100 48.0
EL10Ac4g09083 Beta vulgaris HOM05D009871 ORTHO05D011190 9.1e-11 71.2 120 39.2
CDE06G2308 Ceratophyllum demersum HOM05D000213 ORTHO05D002410 1.2e-10 70.9 131 36.6
SalBow4G1001 Salvia bowleyana HOM05D009871 ORTHO05D011190 1.2e-10 70.9 110 41.8
SalBow4G1147 Salvia bowleyana HOM05D009871 ORTHO05D011190 1.2e-10 70.9 110 41.8
Aqoxy2G03564 Aquilegia oxysepala HOM05D015734 ORTHO05D011190 4.5e-10 68.9 134 39.6
MBI11_g42323_MAGBIO Magnolia biondii HOM05D015734 ORTHO05D011190 7.7e-10 68.2 109 39.4
Oeu016443.1 Olea europaea HOM05D009871 ORTHO05D011190 1.3e-09 67.4 93 47.3
Aqoxy5G00326 Aquilegia oxysepala HOM05D015734 ORTHO05D011190 2.9e-09 66.2 111 34.2
unitig_899.g15584 Utricularia gibba HOM05D009871 ORTHO05D011190 5.0e-09 65.5 66 56.1
Migut.N01918 Erythranthe guttata HOM05D009871 ORTHO05D011190 8.5e-09 64.7 65 60.0
Migut.N01917 Erythranthe guttata HOM05D009871 ORTHO05D011190 1.1e-08 64.3 123 39.8
MBI04_g43205_MAGBIO Magnolia biondii HOM05D015734 ORTHO05D011190 1.5e-08 63.9 134 32.8
unitig_746.g26847 Utricularia gibba HOM05D009871 ORTHO05D011190 1.9e-08 63.5 63 58.7
MBI04_g43203_MAGBIO Magnolia biondii HOM05D015734 ORTHO05D011190 9.4e-08 61.2 121 32.2
SGA_v2.0_scaffold80G25898 Striga asiatica HOM05D009871 ORTHO05D011190 1.2e-07 60.8 63 58.7
SGA_v2.0_scaffold183G39862 Striga asiatica HOM05D065002 ORTHO05D011190 5.2e-06 55.5 53 60.4
SGA_v2.0_scaffold59G20761 Striga asiatica HOM05D009871 ORTHO05D011190 6.7e-06 55.1 75 49.3


User provided reference genes

Program Settings