Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 1.0e-125 453.4 225 100.0
Cc02_g27330 Coffea canephora HOM05D008744 ORTHO05D010647 6.3e-38 161.8 153 53.6
Cc04_g16250 Coffea canephora HOM05D021019 ORTHO05D010647 1.1e-10 71.2 114 37.7
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.5e-10 70.1 140 34.3
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.2e-10 69.7 140 34.3
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 7.2e-10 68.6 123 35.8
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 7.2e-10 68.6 123 35.8
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 9.4e-10 68.2 131 32.1
Solyc03g005110.3 Solanum lycopersicum HOM05D008744 ORTHO05D010647 6.1e-09 65.5 191 35.6
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 6.1e-09 65.5 126 34.1
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 1.0e-08 64.7 126 34.9
CAN.G3720.1 Capsicum annuum HOM05D010354 ORTHO05D015557 1.4e-08 64.3 140 34.3
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.8e-08 63.9 130 33.1
CAN.G128.123 Capsicum annuum HOM05D001907 ORTHO05D015557 1.8e-08 63.9 140 34.3
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 1.8e-08 63.9 121 35.5
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 1.8e-08 63.9 121 35.5
Peaxi162Scf00700g00244 Petunia axillaris HOM05D008744 ORTHO05D010647 2.3e-08 63.5 126 34.9
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 5.2e-08 62.4 126 33.3
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 6.7e-08 62.0 114 32.5
CAN.G128.119 Capsicum annuum HOM05D001907 ORTHO05D015557 8.8e-08 61.6 140 34.3
CAN.G128.124 Capsicum annuum HOM05D001907 ORTHO05D015557 8.8e-08 61.6 140 34.3
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.1e-07 61.2 114 36.0
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 1.1e-07 61.2 108 35.2
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 1.5e-07 60.8 112 30.4
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.5e-07 60.8 128 32.0
Cc07_g20430 Coffea canephora HOM05D021019 ORTHO05D010647 2.6e-07 60.1 102 40.2
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 3.3e-07 59.7 108 35.2
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 3.3e-07 59.7 134 33.6
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 4.4e-07 59.3 128 32.0
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 4.4e-07 59.3 138 30.4
Sopen03g001120 Solanum pennellii HOM05D008744 ORTHO05D010647 9.7e-07 58.2 134 38.1
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 9.7e-07 58.2 150 25.3
QL04p003256 Quercus lobata HOM05D019990 ORTHO05D007789 1.7e-06 57.4 131 32.1
PGSC0003DMG400029323 Solanum tuberosum HOM05D008667 ORTHO05D010850 1.7e-06 57.4 112 32.1
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.7e-06 57.4 150 25.3
Peaxi162Scf00924g00020 Petunia axillaris HOM05D008667 ORTHO05D010850 2.2e-06 57.0 86 36.0
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 2.8e-06 56.6 112 33.9
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 3.7e-06 56.2 128 30.5
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.3e-06 55.5 162 29.6
Peaxi162Scf00191g00112 Petunia axillaris HOM05D008667 ORTHO05D010850 6.3e-06 55.5 117 28.2
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 8.2e-06 55.1 125 28.8
Peaxi162Scf00124g01414 Petunia axillaris HOM05D008667 ORTHO05D010850 8.2e-06 55.1 121 30.6


User provided reference genes

Program Settings