Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 3.7e-85 318.2 158 100.0
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.5e-49 199.1 153 67.3
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.7e-48 195.7 151 64.2
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 8.8e-47 190.7 151 68.2
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 4.4e-46 188.3 146 65.1
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.2e-45 186.0 141 66.0
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.8e-45 185.7 147 64.6
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 3.7e-45 185.3 143 62.9
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 4.8e-45 184.9 147 66.7
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 6.3e-45 184.5 132 69.7
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 6.3e-45 184.5 151 64.2
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.1e-44 183.7 132 72.0
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.4e-44 183.3 151 63.6
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 3.1e-44 182.2 151 62.9
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 5.4e-44 181.4 146 59.6
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 7.0e-44 181.0 151 63.6
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.2e-43 180.3 132 70.5
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.6e-43 179.9 151 61.6
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.0e-43 179.5 145 64.8
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 2.7e-43 179.1 145 64.1
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 3.5e-43 178.7 151 60.9
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 3.5e-43 178.7 143 62.9
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 3.5e-43 178.7 143 62.9
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 4.5e-43 178.3 148 63.5
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.0e-42 177.2 149 59.1
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.3e-42 176.8 132 68.9
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 2.2e-42 176.0 151 60.9
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 3.8e-42 175.3 149 57.7
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 3.8e-42 175.3 143 64.3
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.8e-42 175.3 132 67.4
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 3.8e-42 175.3 152 59.9
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 5.0e-42 174.9 149 59.7
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 6.5e-42 174.5 146 61.0
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 6.5e-42 174.5 141 62.4
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.1e-41 173.7 135 63.7
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.5e-41 173.3 147 62.6
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 3.2e-41 172.2 135 66.7
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 3.2e-41 172.2 147 58.5
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 4.2e-41 171.8 135 60.7
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 4.2e-41 171.8 150 56.7
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 5.5e-41 171.4 149 59.1
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.2e-41 171.0 147 61.9
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 7.2e-41 171.0 135 64.4
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 9.5e-41 170.6 147 61.2
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 9.5e-41 170.6 132 67.4
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.2e-40 170.2 147 61.9
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.2e-40 170.2 132 67.4
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 2.1e-40 169.5 135 60.7
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 2.1e-40 169.5 135 63.7
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.7e-40 169.1 132 66.7
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.6e-40 168.7 179 50.8
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 3.6e-40 168.7 135 63.7
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 3.6e-40 168.7 136 61.8
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 3.6e-40 168.7 131 66.4
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.0e-39 167.2 132 65.9
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.4e-39 166.8 156 53.8
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.3e-39 166.0 149 61.1
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 4.0e-39 165.2 135 63.0
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.2e-39 164.9 147 59.2
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 5.2e-39 164.9 148 56.1
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 6.8e-39 164.5 150 57.3
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 6.8e-39 164.5 135 62.2
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 8.8e-39 164.1 138 63.0
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.2e-38 163.7 132 62.1
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.2e-38 163.7 132 65.9
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 2.0e-38 162.9 135 61.5
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 2.6e-38 162.5 141 56.7
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 4.4e-38 161.8 135 60.7
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 7.5e-38 161.0 132 62.1
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 9.8e-38 160.6 132 62.1
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 1.3e-37 160.2 141 57.4
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.3e-37 160.2 132 64.4
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.2e-37 159.5 155 58.1
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 2.8e-37 159.1 141 55.3
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 3.7e-37 158.7 130 61.5
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 8.3e-37 157.5 132 59.8
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.8e-36 156.4 140 58.6
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.8e-36 156.4 139 58.3
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.4e-36 156.0 137 64.2
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.1e-36 155.6 134 57.5
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.1e-36 155.2 131 60.3
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.4e-36 154.8 147 57.8
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 5.4e-36 154.8 134 57.5
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.2e-35 153.7 133 58.6
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 3.5e-35 152.1 140 57.9
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.9e-34 149.1 135 57.8
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 2.9e-34 149.1 138 56.5
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 9.5e-33 144.1 134 57.5
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.2e-32 143.7 133 57.9
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.6e-32 143.3 134 56.7
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 2.8e-32 142.5 134 56.0
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 3.6e-32 142.1 134 56.7
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 3.6e-32 142.1 134 56.7
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 6.1e-32 141.4 134 56.7
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 6.1e-32 141.4 134 56.7
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 8.0e-32 141.0 134 56.7
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.4e-31 140.2 134 54.5
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.8e-31 139.8 134 57.5
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.8e-31 139.8 134 57.5
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 2.6e-30 136.0 134 56.0
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 5.7e-30 134.8 160 46.9
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 2.0e-27 126.3 143 49.0
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.9e-27 124.8 132 56.1
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 8.6e-26 120.9 78 71.8
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 1.1e-25 120.6 146 46.6
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 2.1e-24 116.3 143 45.5
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.0e-23 114.0 71 71.8
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.8e-23 113.2 151 44.4
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.2e-20 102.4 57 78.9
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 8.1e-16 87.8 91 52.7
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.8e-15 86.7 109 46.8
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 5.2e-15 85.1 157 32.5
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 4.4e-14 82.0 50 68.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 8.3e-13 77.8 120 38.3
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.4e-12 77.0 86 48.8


User provided reference genes

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