Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1738 Capsella rubella HOM05D008242 ORTHO05D010974 1.3e-125 453.0 218 100.0
AT5G56910 Arabidopsis thaliana HOM05D008242 ORTHO05D010974 6.2e-83 311.2 218 67.4
AL8G32770 Arabidopsis lyrata HOM05D008242 ORTHO05D010974 5.1e-61 238.4 223 55.2
AT5G56920 Arabidopsis thaliana HOM05D008242 ORTHO05D010974 3.8e-56 222.2 223 51.6
Carub.0008s1737 Capsella rubella HOM05D008242 ORTHO05D010974 6.4e-56 221.5 208 55.8
BolC3t13973H Brassica oleracea HOM05D008242 ORTHO05D010974 4.2e-55 218.8 222 53.6
BcaB01g04430 Brassica carinata HOM05D008242 ORTHO05D010974 1.6e-54 216.9 214 53.7
BcaB01g04431 Brassica carinata HOM05D008242 ORTHO05D010974 7.9e-54 214.5 207 53.6
BcaB01g04429 Brassica carinata HOM05D008242 ORTHO05D010974 2.5e-52 209.5 214 51.4
BolC3t13968H Brassica oleracea HOM05D008242 ORTHO05D010974 2.4e-50 203.0 216 50.5
Thhalv10015718m.g Eutrema salsugineum HOM05D008242 ORTHO05D010974 1.3e-48 197.2 218 47.2
Thhalv10014562m.g Eutrema salsugineum HOM05D008242 ORTHO05D010974 5.1e-45 185.3 227 46.7
AL8G32880 Arabidopsis lyrata HOM05D008242 ORTHO05D010974 2.3e-37 159.8 207 41.1
Aa31LG3G11790 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.1e-36 157.5 221 43.0
AL8G32860 Arabidopsis lyrata HOM05D008242 ORTHO05D010974 1.5e-36 157.1 207 41.1
Aa31LG3G11810 Aethionema arabicum HOM05D008242 ORTHO05D010974 8.2e-35 151.4 209 42.1
Aa31LG3G12810 Aethionema arabicum HOM05D008242 ORTHO05D010974 9.1e-34 147.9 188 44.7
Aa31LG3G12820 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.2e-33 147.5 209 43.5
Aa31sc2648G10 Aethionema arabicum HOM05D008242 ORTHO05D010974 3.4e-33 146.0 182 45.6
Aa31LG3G12560 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.0e-32 144.4 210 38.6
Aa31LG3G13810 Aethionema arabicum HOM05D008242 ORTHO05D010974 2.5e-31 139.8 218 39.0
Aa31LG3G12680 Aethionema arabicum HOM05D008242 ORTHO05D010974 7.2e-31 138.3 206 39.3
Thhalv10016041m.g Eutrema salsugineum HOM05D008242 ORTHO05D010974 6.1e-30 135.2 173 40.5
Aa31LG3G12650 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.4e-29 134.0 195 37.9
Aa31LG3G12600 Aethionema arabicum HOM05D008242 ORTHO05D010974 3.0e-29 132.9 196 38.8
Aa31LG3G12590 Aethionema arabicum HOM05D008242 ORTHO05D010974 4.4e-28 129.0 214 37.4
Carub.0008s1747 Capsella rubella HOM05D008242 ORTHO05D010974 1.3e-27 127.5 175 41.1
Aa31LG3G12830 Aethionema arabicum HOM05D008242 ORTHO05D010974 5.3e-26 122.1 208 36.1
Aa31LG3G11800 Aethionema arabicum HOM05D008242 ORTHO05D010974 3.4e-25 119.4 175 41.7
Aa31LG3G12640 Aethionema arabicum HOM05D008242 ORTHO05D010974 7.7e-25 118.2 165 39.4
Aa31LG1G19280 Aethionema arabicum HOM05D008242 ORTHO05D010974 8.5e-24 114.8 192 35.4
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 2.3e-21 106.7 226 36.7
BcaC01g06457 Brassica carinata HOM05D008242 ORTHO05D010974 2.6e-20 103.2 186 34.4
BcaNung05245 Brassica carinata HOM05D008242 ORTHO05D010974 2.6e-20 103.2 186 34.4
C03p15240 Brassica napus HOM05D008242 ORTHO05D010974 2.6e-20 103.2 186 34.4
THA.LOC104820431 Tarenaya hassleriana HOM05D008242 ORTHO05D010974 1.1e-18 97.8 174 31.6
AL7G39700 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 1.4e-18 97.4 146 35.6
BcaB01g04426 Brassica carinata HOM05D008242 ORTHO05D010974 1.4e-18 97.4 219 35.2
AL7G39710 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 7.7e-17 91.7 169 32.5
BcaC01g06450 Brassica carinata HOM05D008242 ORTHO05D010974 3.8e-16 89.4 78 56.4
THA.LOC104822258 Tarenaya hassleriana HOM05D008242 ORTHO05D012602 1.1e-15 87.8 149 33.6
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 1.0e-13 81.3 142 33.8
THA.LOC104822259 Tarenaya hassleriana HOM05D008242 ORTHO05D012602 1.8e-13 80.5 149 31.5
AT5G56990 Arabidopsis thaliana HOM05D008242 ORTHO05D010974 3.0e-13 79.7 98 40.8
BolC3t13965H Brassica oleracea HOM05D008242 ORTHO05D010974 8.8e-13 78.2 114 39.5
AT4G15710 Arabidopsis thaliana HOM05D008242 ORTHO05D012602 6.3e-11 72.0 123 32.5
Carub.0007s2681 Capsella rubella HOM05D008242 ORTHO05D012602 8.2e-11 71.6 134 32.8
CARHR270730 Cardamine hirsuta HOM05D008242 ORTHO05D010974 1.0e-08 64.7 76 42.1
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 2.9e-08 63.2 156 27.6
THA.LOC104809075 Tarenaya hassleriana HOM05D008242 ORTHO05D012602 3.2e-07 59.7 77 39.0
AT4G15715 Arabidopsis thaliana HOM05D008242 ORTHO05D012602 9.4e-07 58.2 105 31.4


User provided reference genes

Program Settings