Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0740 Capsella rubella HOM05D040730 ORTHO05D019747 8.1e-69 263.5 119 100.0
Carub.0002s0978 Capsella rubella HOM05D029864 ORTHO05D031471 6.7e-31 137.5 72 81.9
BcaC06g35658 Brassica carinata HOM05D010891 ORTHO05D014503 5.5e-17 91.3 115 42.6
BcaC01g03557 Brassica carinata HOM05D013010 ORTHO05D018622 3.9e-15 85.1 87 47.1
BcaC05g27536 Brassica carinata HOM05D013010 ORTHO05D018622 6.7e-15 84.3 87 47.1
AL2G24450 Arabidopsis lyrata HOM05D024632 ORTHO05D031429 2.2e-13 79.3 73 43.8
Sp7g10650 Schrenkiella parvula HOM05D010153 ORTHO05D012295 2.8e-13 79.0 107 34.6
AT2G15180 Arabidopsis thaliana HOM05D028022 ORTHO05D031453 1.4e-12 76.6 110 33.6
AT4G07350 Arabidopsis thaliana HOM05D040730 ORTHO05D019747 1.4e-12 76.6 77 46.8
AT1G40129 Arabidopsis thaliana HOM05D040730 ORTHO05D019747 3.4e-11 72.0 71 43.7
BolC1t02316H Brassica oleracea HOM05D010891 ORTHO05D014503 5.0e-10 68.2 116 33.6
BolC1t04446H Brassica oleracea HOM05D010891 ORTHO05D014503 5.0e-10 68.2 116 32.8
SpUn0675_0010 Schrenkiella parvula HOM05D010775 ORTHO05D017595 4.7e-08 61.6 99 34.3
BcaC09g49810 Brassica carinata HOM05D065456 ORTHO05D019747 6.1e-08 61.2 62 45.2
C01p32740 Brassica napus HOM05D065456 ORTHO05D019747 6.1e-08 61.2 62 45.2
Sp3g24010 Schrenkiella parvula HOM05D010153 ORTHO05D012295 1.8e-07 59.7 75 38.7
TWI12G0374 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.8e-07 59.7 68 32.4
TWI74G1083 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.8e-07 59.7 68 32.4
THA.LOC104808429 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 2.3e-07 59.3 67 35.8
BcaB05g23068 Brassica carinata HOM05D010891 ORTHO05D019747 3.0e-07 58.9 67 35.8
BNapus_Darmor_BZH_scaffold_51p00050 Brassica napus HOM05D008465 ORTHO05D010905 3.0e-07 58.9 62 40.3
THA.LOC104801735 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 3.0e-07 58.9 80 33.8
MBI06_g28844_MAGBIO Magnolia biondii HOM05D012572 ORTHO05D011737 6.7e-07 57.8 81 32.1
C07p11190 Brassica napus HOM05D013010 ORTHO05D018622 8.8e-07 57.4 77 29.9
THA.LOC104823223 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 1.1e-06 57.0 80 32.5
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 1.5e-06 56.6 81 29.6
THA.LOC104801896 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 2.6e-06 55.8 77 33.8
THA.LOC104807148 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 2.6e-06 55.8 77 33.8
THA.LOC104808468 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 2.6e-06 55.8 77 33.8
TWI36G1097 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.3e-06 55.5 68 32.4
THA.LOC104803155 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 5.7e-06 54.7 77 33.8
THA.LOC104806099 Tarenaya hassleriana HOM05D010409 ORTHO05D000563 5.7e-06 54.7 77 33.8


User provided reference genes

Program Settings