Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s1000 Capsella rubella HOM05D000496 ORTHO05D000411 3.1e-113 411.8 201 100.0
Carub.0002s0991 Capsella rubella HOM05D000496 ORTHO05D000411 4.7e-93 344.7 176 94.9
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 3.1e-20 102.8 183 39.3
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 6.9e-20 101.7 69 71.0
Carub.0007s3157 Capsella rubella HOM05D000496 ORTHO05D000411 4.9e-18 95.5 70 65.7
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 1.1e-17 94.4 71 64.8
Carub.0008s0594 Capsella rubella HOM05D000496 ORTHO05D000411 1.4e-17 94.0 70 67.1
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 7.1e-17 91.7 146 40.4
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 8.7e-15 84.7 68 61.8
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 7.3e-14 81.6 70 57.1
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 4.8e-13 79.0 70 60.0
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.8e-13 79.0 82 48.8
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.8e-13 79.0 82 48.8
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 8.1e-13 78.2 58 58.6
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-12 77.4 76 50.0
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-12 77.4 81 45.7
Thhalv10027058m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-12 77.4 69 55.1
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.8e-12 77.0 70 55.7
Thhalv10028246m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.8e-12 77.0 68 57.4
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-12 76.6 69 52.2
Sp1g33610 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.4e-12 76.6 68 55.9
BcaB04g17415 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-12 76.3 68 54.4
Sp4g05320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.3e-12 75.5 69 50.7
Sp4g08700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.0e-12 74.7 113 39.8
Sp5g18290 Schrenkiella parvula HOM05D008211 ORTHO05D000411 9.0e-12 74.7 73 50.7
BcaB06g27750 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-11 74.3 62 59.7
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-11 74.3 76 47.4
Sp3g23630 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.2e-11 74.3 68 51.5
BcaB02g06959 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-11 73.9 68 50.0
BcaB04g17505 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-11 73.9 130 36.2
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.5e-11 73.9 60 55.0
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-11 73.6 69 50.7
Sp7g10700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.0e-11 73.6 71 49.3
Sp4g07540 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.4e-11 72.8 68 54.4
Sp6g09290 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.4e-11 72.8 76 48.7
Thhalv10005542m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.5e-11 72.4 69 52.2
Sp3g28380 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.5e-11 72.4 69 55.1
SpUn0002_0030 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.5e-11 72.4 69 50.7
Sp1g29320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.8e-11 72.0 68 51.5
Sp3g24940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.8e-11 72.0 71 47.9
SpUn0001_0770 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.8e-11 72.0 73 49.3
BcaC05g29488 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-11 71.6 70 54.3
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-11 71.2 87 44.8
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-10 70.5 71 49.3
BcaNung04302 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-10 70.5 152 32.9
Thhalv10000620m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-10 70.5 70 50.0
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-10 70.5 70 50.0
BcaC06g35999 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-10 70.1 65 47.7
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.2e-10 70.1 69 44.9
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-10 69.7 69 50.7
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 2.9e-10 69.7 70 50.0
Sp6g07640 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.9e-10 69.7 47 61.7
Sp7g09900 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.9e-10 69.7 71 47.9
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-10 69.3 69 49.3
Sp3g26540 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.8e-10 69.3 47 61.7
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.8e-10 69.3 68 44.1
Sp5g17960 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.8e-10 69.3 72 45.8
BcaB04g17753 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-10 68.9 70 47.1
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 4.9e-10 68.9 82 43.9
BcaC08g46291 Brassica carinata HOM05D000496 ORTHO05D027247 4.9e-10 68.9 68 47.1
Sp5g18410 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.9e-10 68.9 66 47.0
BcaB03g16361 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-10 68.6 68 47.1
BcaC06g36324 Brassica carinata HOM05D000496 ORTHO05D027247 6.4e-10 68.6 68 48.5
Sp7g03480 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.4e-10 68.6 70 42.9
SpUn0025_0070 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.4e-10 68.6 123 31.7
BcaC04g21212 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-10 68.2 63 52.4
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-10 68.2 62 51.6
BcaB01g01299 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 67.8 68 47.1
BcaB07g31293 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 67.8 47 61.7
Thhalv10012328m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-09 67.8 55 60.0
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-09 67.8 47 61.7
C06p42420 Brassica napus HOM05D000496 ORTHO05D000411 1.4e-09 67.4 70 48.6
BraA04t16615Z Brassica rapa HOM05D000496 ORTHO05D000411 1.4e-09 67.4 69 46.4
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-09 67.0 70 50.0
BcaB03g15279 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-09 66.6 68 47.1
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-09 66.6 70 51.4
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-09 66.6 71 46.5
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 3.2e-09 66.2 63 50.8
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-09 65.9 69 52.2
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-09 65.9 70 48.6
BcaC02g09783 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-09 65.9 69 46.4
BcaC06g35904 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-09 65.9 64 50.0
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-09 65.9 71 43.7
BcaC09g49300 Brassica carinata HOM05D000496 ORTHO05D023877 4.2e-09 65.9 69 44.9
C01p40400 Brassica napus HOM05D000496 ORTHO05D023877 4.2e-09 65.9 69 44.9
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 4.2e-09 65.9 70 48.6
Sp6g11020 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.2e-09 65.9 46 58.7
SpUn0257_0010 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.2e-09 65.9 66 45.5
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-09 65.5 69 52.2
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-09 65.5 71 46.5
Sp1g31040 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.4e-09 65.5 68 47.1
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.4e-09 65.5 68 45.6
Sp7g07460 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.4e-09 65.5 68 44.1
BcaB01g02818 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-09 65.1 82 40.2
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-09 65.1 70 48.6
BcaC03g16657 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-09 65.1 70 50.0
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-09 65.1 68 48.5
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 7.1e-09 65.1 70 48.6
Thhalv10005429m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 7.1e-09 65.1 46 60.9
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 9.3e-09 64.7 71 45.1
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-08 63.9 70 45.7
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 1.6e-08 63.9 69 46.4
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-08 63.5 46 54.3
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-08 63.5 87 41.4
Thhalv10002274m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.1e-08 63.5 65 46.2
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-08 63.2 47 57.4
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-08 63.2 72 45.8
BolC1t03568H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-08 63.2 72 45.8
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-08 63.2 70 45.7
BcaB05g24503 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-08 62.8 68 44.1
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-08 62.8 70 47.1
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-08 62.8 46 58.7
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-08 62.8 70 45.7
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-08 62.8 70 45.7
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 3.5e-08 62.8 47 55.3
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-08 62.4 79 45.6
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-08 62.4 70 50.0
Sp5g17180 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.6e-08 62.4 46 58.7
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-08 62.0 47 55.3
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-08 62.0 47 55.3
BcaC04g21193 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-08 62.0 65 44.6
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-08 61.6 43 58.1
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-07 60.8 91 36.3
BolC8t47690H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-07 60.8 72 44.4
Thhalv10003397m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.3e-07 60.8 46 60.9
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-07 60.5 47 53.2
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-07 60.5 70 41.4
Sp6g10600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.8e-07 60.5 61 39.3
BcaC06g35793 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-07 60.1 68 42.6
BcaC08g43609 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-07 60.1 64 48.4
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 2.3e-07 60.1 70 40.0
BolC7t41547H Brassica oleracea HOM05D000496 ORTHO05D000411 2.3e-07 60.1 68 42.6
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-07 60.1 46 54.3
BolC1t03278H Brassica oleracea HOM05D000496 ORTHO05D000411 3.0e-07 59.7 64 45.3
BolC5t32675H Brassica oleracea HOM05D000496 ORTHO05D000411 3.0e-07 59.7 69 44.9
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 59.3 46 54.3
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 59.3 69 43.5
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-07 58.9 70 44.3
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 57.4 65 41.5
BcaC04g19439 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 57.0 148 31.8
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 57.0 47 53.2
Sp6g09170 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.9e-06 57.0 48 50.0
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 56.6 82 35.4
Sp6g12660 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.3e-06 56.2 39 64.1
Thhalv10001142m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.3e-06 55.8 40 57.5
Sp7g10820 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.3e-06 55.8 68 42.6
C03p82040 Brassica napus HOM05D000496 ORTHO05D000411 5.6e-06 55.5 39 61.5


User provided reference genes

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