Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 2.6e-308 1061.2 533 100.0
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 4.5e-228 794.7 536 78.7
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 5.7e-215 751.1 554 73.3
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 2.3e-179 632.9 434 78.8
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.7e-174 616.7 531 66.1
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.5e-170 602.8 536 64.9
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.0e-167 593.2 540 62.8
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 2.2e-166 589.7 550 62.0
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 3.5e-164 582.4 548 61.1
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 6.2e-161 571.6 547 61.8
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 4.0e-160 568.9 568 59.0
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 3.4e-159 565.8 518 63.5
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 1.9e-157 560.1 526 62.5
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 2.7e-132 476.5 519 54.5
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 6.1e-132 475.3 562 52.0
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 4.8e-129 465.7 514 54.7
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.8e-128 463.8 548 53.8
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.5e-127 460.7 545 53.8
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 2.5e-125 453.4 553 53.0
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 4.2e-125 452.6 512 52.9
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 7.9e-124 448.4 578 51.2
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.1e-122 444.5 586 48.0
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 2.0e-122 443.7 460 56.7
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 1.7e-121 440.7 508 53.9
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 2.2e-121 440.3 554 51.1
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 3.7e-121 439.5 537 51.0
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.4e-120 437.6 522 52.7
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 1.4e-120 437.6 475 54.1
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.4e-120 436.8 534 52.2
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 2.4e-120 436.8 550 50.7
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.1e-120 436.4 557 50.3
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 5.3e-120 435.6 476 54.2
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.0e-118 431.4 539 51.0
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.8e-118 429.5 578 49.8
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.4e-117 427.6 599 47.6
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.4e-117 427.6 476 54.2
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 5.5e-117 425.6 479 52.8
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 9.4e-117 424.9 561 49.0
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 6.1e-116 422.2 576 49.1
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.8e-115 420.6 462 53.7
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 1.5e-114 417.5 554 48.4
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 2.0e-114 417.2 551 47.7
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 2.0e-114 417.2 516 49.6
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 2.6e-114 416.8 515 48.9
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 2.6e-114 416.8 578 47.8
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 4.4e-114 416.0 439 55.4
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 2.8e-113 413.3 379 59.6
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 6.3e-113 412.1 529 48.4
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.8e-112 410.6 543 47.7
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 2.4e-112 410.2 469 52.5
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 5.3e-112 409.1 501 50.5
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.2e-111 407.9 422 56.6
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 1.5e-111 407.5 507 50.7
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.5e-111 407.5 467 51.8
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 2.0e-111 407.1 452 52.9
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 2.6e-111 406.8 502 51.8
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 7.7e-111 405.2 568 46.8
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.0e-110 402.5 395 55.7
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 8.5e-110 401.7 525 49.1
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.1e-109 401.4 663 41.9
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 5.5e-109 399.1 453 53.0
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 1.0e-107 394.8 515 48.5
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 6.7e-107 392.1 511 47.9
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 5.7e-106 389.0 571 46.1
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 9.7e-106 388.3 439 52.6
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 2.2e-105 387.1 522 47.7
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 2.8e-105 386.7 522 48.1
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 6.3e-105 385.6 503 47.5
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 6.3e-105 385.6 511 46.4
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 2.4e-104 383.6 527 48.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.6e-103 380.2 470 48.9
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 5.9e-103 379.0 521 48.0
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 6.5e-102 375.6 552 44.4
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.5e-101 374.4 519 48.0
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.5e-101 374.4 519 48.0
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 5.5e-101 372.5 460 49.1
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.8e-99 367.5 442 49.1
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.4e-98 363.2 464 48.7
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 4.4e-98 362.8 422 50.7
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 4.8e-97 359.4 467 48.6
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.8e-96 357.5 485 47.2
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 7.0e-96 355.5 419 49.9
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 9.1e-96 355.1 428 49.1
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 1.2e-95 354.8 350 55.7
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 2.7e-95 353.6 481 44.9
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.0e-94 351.7 381 50.9
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 1.0e-94 351.7 411 49.1
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 3.8e-94 349.7 432 49.8
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 3.8e-94 349.7 580 40.7
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 6.5e-94 349.0 437 47.6
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 8.5e-94 348.6 481 46.2
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.1e-93 348.2 355 53.5
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.5e-93 347.8 430 49.3
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.2e-93 346.7 489 46.4
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 3.6e-92 343.2 493 45.0
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 1.0e-91 341.7 429 48.5
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 1.0e-91 341.7 429 48.5
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.8e-91 340.9 407 47.9
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 4.0e-91 339.7 510 43.7
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 4.0e-91 339.7 403 49.6
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.5e-90 337.8 493 44.8
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 5.7e-90 335.9 413 47.9
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 7.5e-90 335.5 483 47.4
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 3.7e-89 333.2 448 46.7
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.4e-88 331.3 458 47.6
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 1.8e-88 330.9 440 47.7
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 2.4e-88 330.5 453 46.8
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 9.1e-88 328.6 452 46.7
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.2e-87 328.2 451 46.8
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.2e-87 328.2 451 46.8
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 2.0e-87 327.4 492 46.7
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.8e-86 323.2 366 51.4
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 2.5e-85 320.5 361 47.9
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 5.5e-85 319.3 411 48.4
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 5.5e-85 319.3 519 43.0
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 4.7e-84 316.2 446 45.3
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.8e-83 314.3 403 44.2
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.0e-83 313.2 349 51.9
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 9.8e-82 308.5 389 45.8
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 6.3e-81 305.8 339 53.7
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.1e-80 305.1 391 43.7
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 5.4e-80 302.8 425 46.4
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.2e-79 301.6 441 44.2
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.5e-77 294.7 440 42.3
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.1e-76 290.8 323 52.6
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.2e-72 276.9 241 66.0
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.2e-71 275.0 278 56.1
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 8.6e-70 268.9 559 38.8
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.6e-68 264.6 274 54.4
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 6.2e-68 262.7 281 49.8
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.5e-66 258.1 274 56.9
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 7.1e-64 249.2 330 43.0
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 4.6e-63 246.5 272 51.5
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 6.0e-63 246.1 237 59.1
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.0e-62 243.8 273 50.9
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.1e-56 225.3 247 55.1
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 6.2e-52 209.5 289 46.0
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 8.9e-51 205.7 183 57.9
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 9.3e-40 169.1 395 33.9
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 3.6e-36 157.1 184 48.9
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 9.0e-35 152.5 431 31.3
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.2e-33 147.9 247 45.7
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.9e-32 144.8 473 30.7
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.4e-27 128.6 412 29.1
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 7.6e-26 122.9 200 36.0
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 6.0e-23 113.2 217 35.0
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.6e-20 105.1 183 45.4
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 8.4e-17 92.8 193 36.8
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.3e-13 80.9 159 39.6
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.7e-07 61.2 38 73.7
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 3.6e-07 60.8 98 36.7
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 1.4e-06 58.9 83 43.4


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