Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21499_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 5.6e-121 437.6 212 100.0
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.1e-49 200.7 101 96.0
Ca_28143_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.5e-49 199.5 101 95.0
Ca_12270_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 4.3e-49 198.7 101 93.1
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.4e-47 193.0 101 93.1
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.3e-45 187.2 101 90.1
TPR.G17618 Trifolium pratense HOM05D004511 ORTHO05D005348 1.7e-45 186.8 101 88.1
Psat3g154520 Pisum sativum HOM05D004511 ORTHO05D005348 6.5e-45 184.9 101 88.1
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 8.5e-45 184.5 101 89.1
Ca_07386_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 6.1e-43 178.3 91 95.6
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 6.3e-40 168.3 101 85.1
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 3.1e-39 166.0 101 81.2
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 7.0e-39 164.9 103 80.6
Haze_11476 Corylus avellana HOM05D004511 ORTHO05D005348 7.0e-39 164.9 101 82.2
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 2.0e-38 163.3 142 60.6
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 2.0e-38 163.3 142 60.6
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 7.7e-38 161.4 101 77.2
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 7.7e-38 161.4 101 79.2
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 7.7e-38 161.4 101 79.2
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 1.3e-37 160.6 101 78.2
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 1.3e-37 160.6 101 80.2
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 1.7e-37 160.2 104 76.9
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 1.7e-37 160.2 101 79.2
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.2e-37 159.8 143 60.8
CSS0049524 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.2e-37 159.8 143 60.8
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 2.2e-37 159.8 99 81.8
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 2.2e-37 159.8 101 79.2
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 2.9e-37 159.5 112 72.3
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 3.8e-37 159.1 104 76.0
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 5.0e-37 158.7 100 79.0
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 5.0e-37 158.7 142 62.7
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 6.5e-37 158.3 101 77.2
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 8.5e-37 157.9 91 84.6
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 8.5e-37 157.9 104 76.0
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 8.5e-37 157.9 104 76.0
Lj6g0008121 Lotus japonicus HOM05D004511 ORTHO05D005348 8.5e-37 157.9 96 83.3
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 8.5e-37 157.9 92 81.5
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 8.5e-37 157.9 101 81.2
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 8.5e-37 157.9 101 75.2
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 8.5e-37 157.9 100 79.0
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 8.5e-37 157.9 112 71.4
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.1e-36 157.5 112 71.4
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.1e-36 157.5 112 71.4
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 1.1e-36 157.5 112 71.4
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 1.9e-36 156.8 91 83.5
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 1.9e-36 156.8 96 79.2
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.9e-36 156.8 142 59.2
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 3.2e-36 156.0 99 77.8
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.2e-36 156.0 142 59.2
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.2e-36 156.0 99 77.8
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 4.2e-36 155.6 104 75.0
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 4.2e-36 155.6 99 77.8
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 4.2e-36 155.6 143 61.5
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 4.2e-36 155.6 143 61.5
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 4.2e-36 155.6 143 61.5
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 4.2e-36 155.6 143 61.5
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 4.2e-36 155.6 143 61.5
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 4.2e-36 155.6 92 80.4
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 4.2e-36 155.6 99 77.8
VMungo0720G0394 Vigna mungo HOM05D004511 ORTHO05D005348 4.2e-36 155.6 101 79.2
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 7.2e-36 154.8 101 74.3
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 7.2e-36 154.8 91 80.2
Cpa.g.sc59.13 Carica papaya HOM05D004511 ORTHO05D005348 9.4e-36 154.5 91 82.4
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 9.4e-36 154.5 101 73.3
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 1.6e-35 153.7 91 80.2
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 1.6e-35 153.7 98 76.5
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 1.6e-35 153.7 101 74.3
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 2.1e-35 153.3 96 79.2
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 2.1e-35 153.3 96 76.0
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 2.1e-35 153.3 91 82.4
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 2.7e-35 152.9 91 80.2
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 3.6e-35 152.5 143 60.8
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 4.7e-35 152.1 96 78.1
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 4.7e-35 152.1 91 79.1
Glyma.20G073400 Glycine max HOM05D004511 ORTHO05D005348 4.7e-35 152.1 101 79.2
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 6.1e-35 151.8 98 73.5
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 1.0e-34 151.0 101 73.3
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.0e-34 151.0 101 72.3
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 1.0e-34 151.0 91 78.0
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 1.0e-34 151.0 91 78.0
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 2.3e-34 149.8 104 70.2
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 2.3e-34 149.8 91 79.1
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 2.3e-34 149.8 91 76.9
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 3.0e-34 149.4 101 70.3
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 3.0e-34 149.4 91 80.2
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 3.0e-34 149.4 91 76.9
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 4.0e-34 149.1 95 75.8
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 6.7e-34 148.3 101 68.3
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 6.7e-34 148.3 101 68.3
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 8.8e-34 147.9 102 70.6
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 8.8e-34 147.9 91 76.9
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 1.5e-33 147.1 91 76.9
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.0e-33 146.7 187 46.5
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 2.6e-33 146.4 91 78.0
SEGI_15545 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.6e-33 146.4 186 46.8
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 3.3e-33 146.0 108 67.6
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 3.3e-33 146.0 91 72.5
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 7.5e-33 144.8 92 75.0
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 7.5e-33 144.8 92 75.0
SHI00807 Sapria himalayana HOM05D004511 ORTHO05D005348 9.7e-33 144.4 90 75.6
CDE08G0287 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 2.0e-30 136.7 92 67.4
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 2.0e-30 136.7 105 61.9
CDE02G3055 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 2.7e-30 136.3 92 67.4
unitig_747.g21672 Utricularia gibba HOM05D004511 ORTHO05D005348 2.2e-29 133.3 81 80.2
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 1.1e-23 114.4 142 43.7
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 1.6e-22 110.5 91 57.1
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 2.0e-22 110.2 92 57.6
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 2.2e-21 106.7 86 59.3
CBR_g22305 Chara braunii HOM05D000019 ORTHO05D000048 5.2e-18 95.5 102 48.0
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 5.7e-17 92.0 94 58.5
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 7.0e-15 85.1 94 47.9
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 7.0e-15 85.1 94 46.8
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 3.5e-14 82.8 96 44.8
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 2.3e-13 80.1 105 45.7
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 2.9e-13 79.7 105 36.2
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 8.6e-13 78.2 94 44.7
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 5.6e-12 75.5 94 44.7
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 1.2e-11 74.3 94 43.6
Psat4g091920 Pisum sativum HOM05D004511 ORTHO05D005348 8.9e-10 68.2 44 79.5
Cre06.g250850 Chlamydomonas reinhardtii HOM05D004511 ORTHO05D005348 9.8e-09 64.7 78 46.2
Sopen09g033860 Solanum pennellii HOM05D004511 ORTHO05D005348 1.7e-08 63.9 94 39.4
CSS0022858 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.9e-08 63.2 31 83.9
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 3.7e-08 62.8 29 89.7
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 8.3e-08 61.6 29 89.7
Atru.chr4.2015 Acer truncatum HOM05D004511 ORTHO05D005348 1.8e-07 60.5 37 67.6
Ca_04703_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.2e-07 59.7 33 81.8
VMungo0720G0419 Vigna mungo HOM05D004511 ORTHO05D005348 3.2e-07 59.7 33 75.8
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 4.1e-07 59.3 29 82.8
Solyc09g090890.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 1.6e-06 57.4 35 71.4
CDE08G1197 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 2.7e-06 56.6 86 39.5


User provided reference genes

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