Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 2.3e-72 275.4 135 100.0
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 9.5e-42 173.7 145 66.9
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 2.1e-41 172.6 146 65.8
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 4.7e-41 171.4 136 71.3
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 1.2e-39 166.8 160 58.8
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 1.3e-38 163.3 143 62.9
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 2.2e-38 162.5 142 60.6
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 2.9e-38 162.2 156 58.3
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 1.0e-35 153.7 137 59.9
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 1.3e-35 153.3 138 60.1
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 1.3e-35 153.3 148 60.1
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 6.6e-35 151.0 139 61.2
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 1.1e-34 150.2 137 63.5
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.1e-34 150.2 119 63.9
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 1.5e-34 149.8 150 54.7
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 3.3e-34 148.7 137 59.1
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 3.3e-34 148.7 153 52.3
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 4.3e-34 148.3 131 59.5
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 5.6e-34 147.9 137 61.3
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 2.1e-33 146.0 150 59.3
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.1e-33 146.0 141 59.6
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 2.1e-33 146.0 145 57.2
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 2.1e-33 146.0 141 58.2
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 2.8e-33 145.6 142 59.2
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 2.8e-33 145.6 95 77.9
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 2.8e-33 145.6 139 56.8
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 4.7e-33 144.8 150 59.3
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 4.7e-33 144.8 152 55.9
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 4.7e-33 144.8 141 58.2
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 6.2e-33 144.4 152 57.9
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 6.2e-33 144.4 141 60.3
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 6.2e-33 144.4 132 59.8
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 1.1e-32 143.7 142 59.2
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 1.4e-32 143.3 148 57.4
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 1.4e-32 143.3 145 56.6
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 1.8e-32 142.9 166 53.6
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 1.8e-32 142.9 155 53.5
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 1.8e-32 142.9 94 73.4
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 3.1e-32 142.1 151 57.6
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 3.1e-32 142.1 142 58.5
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 3.1e-32 142.1 151 53.0
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 5.2e-32 141.4 153 53.6
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 5.2e-32 141.4 148 56.8
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 8.9e-32 140.6 141 54.6
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 1.2e-31 140.2 137 57.7
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 1.5e-31 139.8 151 53.6
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 2.6e-31 139.0 153 53.6
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 3.4e-31 138.7 148 56.1
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 4.4e-31 138.3 143 55.2
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 5.8e-31 137.9 120 62.5
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 5.8e-31 137.9 113 65.5
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 7.6e-31 137.5 87 77.0
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 7.6e-31 137.5 148 54.1
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 1.3e-30 136.7 105 66.7
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 1.3e-30 136.7 154 53.9
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 3.8e-30 135.2 134 55.2
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 6.4e-30 134.4 147 52.4
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 8.4e-30 134.0 112 62.5
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 8.4e-30 134.0 147 52.4
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 1.1e-29 133.7 136 56.6
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 1.1e-29 133.7 153 51.6
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.1e-29 133.7 102 66.7
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 1.4e-29 133.3 153 51.6
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 1.9e-29 132.9 154 50.6
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 1.9e-29 132.9 153 50.3
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 1.9e-29 132.9 133 54.9
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 2.4e-29 132.5 135 54.1
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 2.4e-29 132.5 133 54.9
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 2.4e-29 132.5 153 50.3
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 3.2e-29 132.1 104 66.3
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 5.4e-29 131.3 147 49.7
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 7.1e-29 131.0 153 50.3
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 7.1e-29 131.0 153 50.3
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 9.3e-29 130.6 141 52.5
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 1.2e-28 130.2 98 70.4
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 2.7e-28 129.0 131 53.4
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 4.6e-28 128.3 142 55.6
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 4.6e-28 128.3 87 72.4
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 1.0e-27 127.1 87 71.3
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 2.3e-27 125.9 92 70.7
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 2.3e-27 125.9 85 71.8
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 3.9e-27 125.2 85 71.8
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 8.7e-27 124.0 97 68.0
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 1.1e-26 123.6 96 67.7
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 1.3e-25 120.2 80 73.8
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 2.1e-25 119.4 90 65.6
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 2.8e-25 119.0 102 61.8
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 4.8e-25 118.2 89 74.2
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 4.8e-25 118.2 82 70.7
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 8.1e-25 117.5 97 63.9
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 1.1e-24 117.1 89 73.0
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 1.4e-24 116.7 104 58.7
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 1.4e-24 116.7 83 68.7
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 1.8e-24 116.3 91 64.8
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 2.4e-24 115.9 102 63.7
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 4.0e-24 115.2 83 73.5
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 5.3e-24 114.8 96 59.4
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 6.9e-24 114.4 94 61.7
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 1.5e-23 113.2 155 47.7
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 1.7e-22 109.8 85 64.7
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 1.7e-22 109.8 101 54.5
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 1.6e-20 103.2 103 55.3
Glyma.20G083900 Glycine max HOM05D007223 ORTHO05D008932 1.3e-17 93.6 137 46.0
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 4.8e-17 91.7 84 53.6
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 6.2e-17 91.3 106 47.2
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 8.4e-14 80.9 61 67.2
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 4.3e-10 68.6 78 43.6
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 5.6e-10 68.2 84 44.0
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 2.1e-09 66.2 74 52.7
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 2.8e-09 65.9 75 52.0
CBR_g19697 Chara braunii HOM05D000117 ORTHO05D008932 6.2e-09 64.7 91 36.3
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 8.2e-09 64.3 82 40.2
AagrBONN_evm.TU.Sc2ySwM_117.1187 Anthoceros agrestis HOM05D007223 ORTHO05D008932 9.0e-08 60.8 78 44.9
Aqoxy7G03081 Aquilegia oxysepala HOM05D007223 ORTHO05D008932 1.2e-07 60.5 47 63.8
Aa31LG2G21740 Aethionema arabicum HOM05D000117 ORTHO05D000070 8.4e-06 54.3 77 39.0


User provided reference genes

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