Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 0.0e+00 1269.2 647 100.0
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 5.0e-290 1000.7 661 79.7
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 7.8e-275 950.3 630 79.0
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 3.0e-266 921.8 633 77.9
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 6.6e-250 867.5 665 72.8
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.4e-247 859.8 643 71.4
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 8.4e-245 850.5 643 70.9
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 2.1e-232 809.3 632 69.5
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 2.8e-232 808.9 645 68.8
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.0e-205 720.7 656 61.9
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 1.7e-205 719.9 681 62.0
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 1.4e-204 716.8 681 61.8
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 2.3e-202 709.5 671 60.2
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 6.6e-157 558.5 603 55.2
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 9.5e-156 554.7 617 54.3
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.9e-143 513.8 651 47.6
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 1.8e-138 497.3 617 48.0
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.5e-132 477.6 672 46.4
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 3.4e-129 466.5 669 46.0
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 6.4e-128 462.2 672 44.3
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 4.2e-127 459.5 671 44.7
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 3.7e-123 446.4 624 45.8
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 6.2e-123 445.7 686 43.6
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 5.3e-122 442.6 632 46.0
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.7e-120 437.6 574 47.7
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 1.4e-119 434.5 630 45.2
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.2e-119 433.3 602 46.2
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 5.7e-116 422.5 615 45.2
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 9.6e-116 421.8 666 44.3
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 1.4e-114 417.9 644 43.0
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 1.8e-114 417.5 625 43.8
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 6.9e-114 415.6 609 45.5
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.8e-113 412.5 592 45.8
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-111 408.3 610 44.6
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 7.1e-111 405.6 573 44.9
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.6e-110 402.9 639 43.2
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.0e-109 401.7 573 44.7
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.3e-109 401.4 682 42.4
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 6.7e-109 399.1 573 44.5
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.1e-108 398.3 530 45.3
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.3e-108 396.4 628 43.5
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.7e-108 396.0 639 43.3
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 2.2e-107 394.0 649 43.5
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 1.4e-106 391.3 543 45.7
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 9.0e-106 388.7 578 44.6
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 1.5e-105 387.9 666 40.5
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 2.6e-105 387.1 663 40.3
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.0e-104 385.2 627 42.3
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.0e-104 385.2 639 42.9
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 9.4e-103 378.6 653 42.7
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.2e-102 378.3 583 44.4
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 4.6e-102 376.3 636 41.8
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.2e-99 367.5 642 41.6
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 1.5e-97 361.3 607 42.7
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 8.5e-96 355.5 647 40.0
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.6e-94 351.3 611 39.4
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 4.7e-94 349.7 628 40.0
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 1.5e-92 344.7 651 41.6
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.6e-89 334.0 633 38.5
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.7e-88 331.3 620 39.7
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 2.7e-86 323.9 673 37.4
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 2.6e-84 317.4 649 35.7
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.7e-83 314.7 688 36.3
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.2e-83 314.3 629 37.8
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.2e-83 314.3 736 35.7
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.9e-81 306.2 442 44.1
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 7.7e-81 305.8 608 38.0
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 3.8e-80 303.5 617 37.0
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 8.5e-80 302.4 522 40.4
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.1e-79 302.0 434 43.3
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 3.2e-79 300.4 635 35.7
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 4.2e-79 300.1 550 38.7
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 5.5e-79 299.7 527 38.1
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 4.4e-76 290.0 585 36.8
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 6.3e-75 286.2 623 36.1
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.5e-73 280.0 438 39.3
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 8.0e-70 269.2 584 35.6
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.0e-69 268.9 697 34.4
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.2e-68 265.4 594 37.4
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 6.3e-67 259.6 612 35.8
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 3.5e-65 253.8 633 33.6
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 1.0e-64 252.3 566 35.0
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.1e-63 248.8 585 35.0
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.9e-63 248.1 589 36.3
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 6.8e-61 239.6 572 35.3
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.0e-60 238.0 545 34.7
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 2.2e-59 234.6 596 34.2
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 4.9e-59 233.4 534 36.0
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 6.3e-59 233.0 589 33.4
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 1.8e-58 231.5 572 35.3
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 4.1e-58 230.3 534 35.4
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 5.9e-57 226.5 555 38.2
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 7.8e-57 226.1 561 34.8
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 1.0e-56 225.7 548 36.7
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 2.9e-56 224.2 531 35.0
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 3.9e-56 223.8 538 35.3
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 5.0e-56 223.4 403 39.7
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 3.3e-55 220.7 534 34.8
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 4.3e-55 220.3 534 35.2
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 9.5e-55 219.2 539 34.5
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 6.1e-54 216.5 533 34.3
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 1.4e-53 215.3 533 34.3
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 8.9e-53 212.6 533 34.3
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 2.2e-51 208.0 497 36.0
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 3.2e-50 204.1 556 35.1
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.0e-48 197.6 655 32.4
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 1.6e-46 191.8 666 31.1
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 8.1e-46 189.5 621 31.1
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 3.4e-44 184.1 703 28.0
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 3.7e-43 180.6 703 27.5
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 3.0e-40 171.0 653 30.6
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.9e-35 153.7 218 40.8
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 4.1e-34 150.6 246 38.6
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 3.9e-32 144.1 129 67.4
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 1.9e-26 125.2 561 26.7
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 2.1e-25 121.7 424 29.2
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.0e-20 105.1 326 28.8
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 7.6e-20 103.2 283 32.2
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 4.9e-19 100.5 195 40.0
Psat6g214080 Pisum sativum HOM05D001701 ORTHO05D007490 2.6e-12 78.2 71 60.6
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 7.6e-12 76.6 81 50.6
Psat5g050320 Pisum sativum HOM05D004672 ORTHO05D005732 2.9e-11 74.7 129 45.7
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 4.8e-06 57.4 274 24.5


User provided reference genes

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