Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-164 582.4 273 100.0
Ca_28370_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-103 379.8 300 64.0
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.6e-82 308.1 168 88.7
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 6.4e-61 238.4 250 54.0
Ca_03568_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-58 229.6 179 67.6
Ca_31096_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.1e-56 221.5 104 97.1
Ca_05231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-55 220.7 104 96.2
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-55 219.9 104 96.2
Ca_22478_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.2e-55 218.8 104 95.2
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-54 217.6 103 95.1
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 1.5e-54 217.2 106 93.4
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.7e-53 212.6 108 89.8
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.4e-53 211.8 104 93.3
Ca_31217_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-52 211.1 104 92.3
Ca_16771_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.7e-51 206.5 104 88.5
Ca_10806_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.0e-51 205.3 99 93.9
Ca_00657_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-47 192.6 185 58.9
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.8e-38 162.2 304 37.8
Ca_20984_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.4e-37 158.7 78 89.7
Ca_10492_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.2e-36 156.0 75 93.3
Ca_07256_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 6.0e-35 152.1 75 92.0
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.7e-34 148.3 274 33.6
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-32 143.3 277 34.7
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-31 139.4 295 32.5
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.9e-31 138.7 290 35.2
Ca_05534_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-30 136.7 64 95.3
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-30 136.7 293 34.8
Ca_24276_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.4e-30 136.3 72 80.6
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.6e-30 135.2 300 32.7
Ca_12256_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.9e-30 134.8 64 90.6
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-29 133.3 308 33.1
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.8e-29 132.9 278 33.5
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.9e-29 132.5 315 32.1
Ca_03929_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.4e-28 129.0 66 90.9
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.4e-28 129.0 212 37.3
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.2e-27 127.9 299 31.8
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-27 127.5 180 41.7
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.9e-26 122.9 276 34.8
Ca_01588_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-25 120.9 177 41.2
Ca_15168_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-25 120.9 73 71.2
Ca_13742_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.6e-25 119.0 176 37.5
Ca_02100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-24 116.7 170 41.2
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-23 114.0 219 33.8
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-22 111.3 310 29.4
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-21 105.5 170 35.9
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-21 105.5 103 48.5
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-20 103.2 104 47.1
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.2e-20 102.8 104 47.1
Ca_05232_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 7.1e-20 102.1 52 88.5
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 9.3e-20 101.7 222 33.3
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.4e-17 92.0 290 30.7
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.4e-17 92.0 104 41.3
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.6e-17 91.7 309 24.9
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 1.6e-16 90.9 108 40.7
Ca_03687_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.2e-16 89.0 103 40.8
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.2e-16 88.6 86 50.0
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-15 86.7 105 41.0
Ca_20173_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-14 84.0 260 29.6
Ca_25324_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.5e-14 82.8 276 26.4
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-13 81.6 100 41.0
Ca_19142_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-13 80.1 189 29.1
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 80.1 332 27.4
Ca_23376_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.4e-13 78.6 193 28.5
Ca_19837_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-12 77.4 65 56.9
Ca_14648_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-12 76.6 163 28.8
Ca_14807_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-12 76.6 44 72.7
Ca_18100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-12 76.6 169 34.3
Ca_02550_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.2e-12 76.3 192 29.7
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 2.1e-11 73.9 286 26.2
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-11 73.9 170 32.4
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.6e-11 72.8 78 47.4
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 6.1e-11 72.4 294 24.8
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.9e-11 72.0 104 36.5
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-10 71.2 294 24.8
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.8e-10 70.9 301 25.9
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-10 70.9 109 36.7
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.3e-10 70.5 104 37.5
Ca_30958_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-10 70.1 67 47.8
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-10 70.1 259 27.4
Ca_04883_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.9e-10 69.7 38 86.8
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.9e-10 69.7 104 40.4
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.9e-10 69.7 129 34.9
Ca_04284_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.1e-10 69.3 193 29.0
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.1e-10 69.3 129 38.0
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.1e-10 69.3 104 35.6
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 5.1e-10 69.3 285 24.9
Ca_14586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.7e-10 68.9 286 25.5
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.9 302 25.2
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.7e-10 68.6 103 39.8
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-09 68.2 294 24.8
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-09 68.2 131 38.9
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-09 67.4 128 39.1
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 4.3e-09 66.2 108 34.3
Ca_07670_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.7e-09 65.1 65 52.3
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.7e-09 65.1 92 43.5
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.3e-08 64.7 128 35.2
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-08 63.2 325 24.0
Ca_01382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.8e-08 62.8 102 38.2
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-08 62.8 244 26.2
Ca_03231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.3e-08 62.4 65 49.2
Ca_14009_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.3e-08 62.4 65 49.2
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 6.3e-08 62.4 206 23.8
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.2e-08 62.0 74 40.5
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-07 61.6 95 41.1
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 1.4e-07 61.2 63 46.0
Ca_11857_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-07 60.8 63 47.6
Ca_22382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-07 60.8 127 32.3
Ca_06652_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.1e-07 59.7 65 47.7
Ca_14010_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.1e-07 59.7 65 47.7
Ca_07112_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.3e-07 59.3 65 49.2
Ca_18938_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.3e-07 59.3 63 47.6
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-07 59.3 229 27.5
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-07 59.3 233 27.0
Ca_14516_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.9e-07 58.9 79 40.5
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.9e-07 58.9 76 40.8
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 9.0e-07 58.5 289 23.5
Ca_07479_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-06 57.8 65 44.6
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.5e-06 57.8 117 29.9
Ca_08864_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-06 57.4 65 44.6
Ca_03093_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.6e-06 57.0 65 44.6
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-06 57.0 193 28.5
Ca_05310_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-06 56.6 96 33.3
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-06 56.6 128 36.7
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-06 56.6 118 28.0
Ca_07725_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.5e-06 56.2 241 27.4
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 4.5e-06 56.2 334 22.5
Ca_14601_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.9e-06 55.8 64 42.2
Ca_16224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.9e-06 55.8 65 44.6
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 5.9e-06 55.8 109 28.4
Ca_01641_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.7e-06 55.5 66 42.4


User provided reference genes

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