Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 0.0e+00 1369.0 694 100.0
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 7.6e-252 874.0 679 69.5
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 2.1e-249 865.9 657 70.9
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.1e-249 865.9 669 70.0
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 3.3e-223 778.9 662 63.4
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 4.0e-208 728.8 681 60.5
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.4e-205 720.3 691 59.0
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 4.2e-202 708.8 594 64.3
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 1.0e-200 704.1 668 58.1
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 4.5e-196 688.7 686 57.0
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 2.1e-164 583.6 715 48.8
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 9.6e-130 468.4 518 51.4
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 2.4e-128 463.8 519 51.3
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 5.3e-128 462.6 519 51.1
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 2.6e-127 460.3 702 41.5
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 5.5e-117 426.0 688 41.3
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 1.4e-112 411.4 691 40.1
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 7.7e-111 405.6 701 38.5
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 7.2e-109 399.1 712 39.0
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 1.1e-106 391.7 693 36.8
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 3.3e-106 390.2 710 37.7
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 4.1e-104 383.3 711 37.3
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.4e-103 380.2 713 36.0
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 5.9e-103 379.4 715 36.1
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 7.7e-103 379.0 709 35.8
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.9e-101 374.4 653 39.1
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 9.4e-101 372.1 688 37.2
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 6.1e-100 369.4 670 36.3
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 2.3e-99 367.5 701 37.2
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 5.2e-99 366.3 665 37.9
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.1e-98 365.2 693 36.2
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 1.1e-98 365.2 701 37.1
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.6e-98 364.0 702 36.3
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 3.3e-98 363.6 702 36.2
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 5.7e-98 362.8 696 36.4
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 3.7e-97 360.1 677 36.3
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.8e-97 359.8 693 36.2
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 6.3e-97 359.4 702 36.0
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 8.2e-97 359.0 700 36.4
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 2.4e-96 357.5 705 36.2
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 9.1e-96 355.5 681 36.9
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 4.5e-95 353.2 696 37.2
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 1.3e-94 351.7 703 35.6
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.9e-93 347.8 705 36.0
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 4.2e-93 346.7 697 35.7
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 1.6e-92 344.7 545 41.5
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.6e-87 328.2 665 35.8
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.1e-85 322.0 711 34.3
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 4.4e-82 310.1 693 33.5
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 5.7e-82 309.7 668 34.6
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 9.8e-82 308.9 560 37.7
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 4.8e-81 306.6 708 32.9
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.2e-79 302.0 699 31.9
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 5.0e-78 296.6 690 32.0
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 2.5e-77 294.3 550 36.5
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 4.0e-75 287.0 695 31.9
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 5.2e-75 286.6 692 32.2
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 5.2e-75 286.6 726 31.3
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 3.4e-74 283.9 691 32.1
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 3.4e-74 283.9 695 31.9
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 7.8e-71 272.7 719 30.6
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.5e-69 268.5 669 32.7
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 3.3e-69 267.3 702 31.9
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 3.6e-68 263.8 641 32.4
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 1.0e-67 262.3 463 37.4
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 2.2e-65 254.6 695 32.1
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 3.2e-64 250.8 672 32.1
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 4.6e-63 246.9 686 29.7
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.0e-62 245.7 664 30.1
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 8.6e-62 242.7 677 30.7
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.6e-60 238.4 708 29.9
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 2.1e-60 238.0 686 31.5
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 1.4e-59 235.3 675 31.1
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 1.8e-59 235.0 725 30.1
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 1.5e-58 231.9 664 30.7
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 4.4e-58 230.3 670 31.0
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 7.5e-58 229.6 675 30.8
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 4.9e-57 226.9 675 31.7
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 8.3e-57 226.1 734 29.0
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.1e-56 225.7 480 34.8
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 1.2e-55 222.2 534 31.8
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.1e-55 221.5 595 30.9
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 4.6e-55 220.3 501 32.7
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 6.0e-55 219.9 676 29.7
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 6.0e-55 219.9 676 29.7
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 6.0e-55 219.9 234 52.1
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 3.0e-54 217.6 621 30.1
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 3.9e-54 217.2 591 31.1
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 3.3e-53 214.2 689 29.2
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 1.4e-51 208.8 631 29.8
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 5.4e-48 196.8 677 27.5
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 2.7e-47 194.5 288 44.1
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 6.0e-47 193.4 604 31.0
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 9.9e-42 176.0 635 27.4
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 1.3e-41 175.6 152 63.2
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 1.3e-41 175.6 703 27.5
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 2.9e-41 174.5 679 27.5
TPR.G18438 Trifolium pratense HOM05D006728 ORTHO05D007911 4.2e-40 170.6 141 64.5
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 9.2e-40 169.5 670 27.8
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 1.9e-37 161.8 156 58.3
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 1.6e-36 158.7 694 28.2
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 3.8e-33 147.5 390 31.3
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 7.1e-32 143.3 529 28.2
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.3e-25 122.5 650 22.2
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 3.9e-22 110.9 626 24.1
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 2.1e-20 105.1 576 26.9
arahy.Tifrunner.gnm1.ann1.Z8YKXQ Arachis hypogaea HOM05D006728 ORTHO05D007911 3.1e-19 101.3 154 41.6
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 9.9e-18 96.3 613 22.8
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 2.5e-16 91.7 148 41.9
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 7.9e-15 86.7 195 30.8
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 2.8e-12 78.2 76 47.4
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 8.2e-12 76.6 642 21.8
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 2.6e-10 71.6 77 41.6
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 1.8e-06 58.9 77 35.1


User provided reference genes

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