Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 2.5e-245 851.7 425 100.0
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 2.2e-217 758.8 430 89.5
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 8.0e-212 740.3 429 87.2
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 2.9e-201 705.3 429 83.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 6.4e-201 704.1 433 82.7
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.4e-200 703.0 430 82.1
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.9e-197 692.6 428 80.4
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 5.2e-195 684.5 434 78.3
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 4.1e-192 674.9 430 77.4
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.3e-190 669.8 429 76.0
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 1.1e-189 666.8 428 78.0
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 2.5e-189 665.6 429 79.3
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 3.3e-189 665.2 428 74.3
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 4.3e-189 664.8 428 78.3
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 9.6e-189 663.7 433 78.1
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 1.2e-188 663.3 429 76.9
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 4.0e-187 658.3 428 76.6
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 5.2e-187 657.9 428 77.1
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 7.6e-186 654.1 428 76.6
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 2.2e-185 652.5 428 75.9
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.2e-185 652.5 428 77.3
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 2.9e-185 652.1 428 77.1
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 4.9e-185 651.4 433 76.0
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 8.4e-185 650.6 424 75.9
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 8.4e-185 650.6 428 76.9
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.1e-184 650.2 431 74.9
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.4e-184 649.8 429 75.5
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 1.4e-184 649.8 426 73.5
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 1.9e-184 649.4 431 72.4
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 5.4e-184 647.9 429 72.7
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 7.1e-184 647.5 429 76.9
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.1e-184 647.5 428 72.7
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 1.2e-183 646.7 453 74.0
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.1e-183 646.0 428 76.4
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.0e-182 643.7 428 74.8
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.3e-182 643.3 429 76.7
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 8.7e-182 640.6 430 75.8
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.8e-179 632.9 429 72.0
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 6.4e-177 624.4 431 73.5
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 6.4e-177 624.4 429 71.3
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 1.9e-176 622.9 430 72.8
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 4.2e-176 621.7 426 70.7
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 1.2e-175 620.2 435 71.7
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 1.6e-175 619.8 433 72.3
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 2.7e-175 619.0 433 72.1
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.0e-174 617.1 430 71.6
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 6.7e-174 614.4 429 73.4
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 6.7e-174 614.4 433 70.7
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.1e-173 613.6 434 71.0
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.9e-173 612.8 429 73.0
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 5.6e-173 611.3 424 70.8
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 9.6e-173 610.5 428 72.2
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.6e-172 609.8 429 72.5
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 5.3e-171 604.7 429 71.1
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 2.2e-169 599.4 435 70.8
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 4.9e-169 598.2 419 75.9
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 6.4e-169 597.8 430 67.7
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.0e-166 590.5 406 74.6
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.0e-166 590.5 430 67.2
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 6.7e-166 587.8 430 70.0
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 4.3e-165 585.1 448 64.5
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 6.2e-164 581.3 432 67.6
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 3.2e-160 568.9 429 65.5
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 4.2e-160 568.5 433 68.4
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 3.0e-158 562.4 431 66.4
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 8.7e-158 560.8 438 64.2
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 1.5e-157 560.1 352 77.8
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 3.3e-157 558.9 425 64.2
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 1.8e-155 553.1 425 63.8
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.4e-155 552.7 421 68.6
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 9.0e-155 550.8 428 61.2
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.2e-154 550.4 426 61.3
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 2.0e-154 549.7 426 61.5
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 2.0e-154 549.7 430 63.5
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 7.6e-154 547.7 426 61.5
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.0e-153 547.4 425 61.6
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 1.7e-153 546.6 426 63.6
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 3.8e-153 545.4 426 62.0
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 6.5e-153 544.7 410 62.4
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 2.1e-151 539.7 426 61.5
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 2.7e-151 539.3 396 68.7
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.7e-151 539.3 329 78.1
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 1.8e-150 536.6 409 68.7
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.1e-149 533.9 414 61.8
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 3.7e-148 528.9 433 64.7
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 6.3e-148 528.1 426 59.9
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 6.3e-148 528.1 425 59.5
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 3.2e-144 515.8 411 67.2
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 7.2e-144 514.6 412 62.9
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 1.0e-142 510.8 434 60.4
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 5.1e-142 508.4 413 63.7
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 1.1e-141 507.3 461 59.0
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 9.7e-141 504.2 429 57.1
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.4e-139 499.6 408 63.7
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 2.6e-138 496.1 394 61.2
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 1.4e-136 490.3 429 64.6
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 3.9e-134 482.3 413 58.8
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 8.8e-134 481.1 426 59.9
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 5.7e-133 478.4 403 61.3
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 7.7e-130 468.0 264 87.9
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 3.3e-125 452.6 329 68.1
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 1.6e-106 390.6 305 67.2
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 3.8e-105 386.0 414 51.2
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 5.6e-96 355.5 424 45.0
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 6.0e-90 335.5 218 69.7
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 7.3e-88 328.6 399 47.4
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 7.5e-85 318.5 322 54.3
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 7.1e-83 312.0 424 42.7
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 7.1e-83 312.0 425 43.3
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.1e-81 305.8 305 50.5
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.2e-69 268.1 201 65.2
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.9e-54 215.7 167 61.1
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 9.0e-54 215.3 135 71.1
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 1.2e-53 214.9 128 76.6
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 5.1e-49 199.5 158 67.1
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 7.4e-48 195.7 223 44.4
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 2.8e-39 167.2 108 73.1
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 2.9e-36 157.1 133 62.4
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.2e-35 152.5 133 60.9
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 2.1e-34 151.0 127 65.4
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 6.3e-31 139.4 82 84.1
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 4.5e-29 133.3 134 54.5
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 1.0e-28 132.1 92 76.1
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.4e-14 84.3 91 54.9
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 3.1e-14 84.0 53 66.0
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 9.4e-11 72.4 54 59.3


User provided reference genes

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