Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.3e-283 977.6 471 100.0
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.1e-273 946.0 473 97.3
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 4.9e-218 761.1 474 77.6
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 3.4e-211 738.4 474 77.8
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.4e-211 738.0 473 76.1
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.7e-207 726.1 473 75.3
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 4.3e-206 721.5 469 75.7
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 9.9e-195 683.7 483 73.1
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.1e-181 639.4 474 69.6
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.4e-178 627.5 460 67.0
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-177 627.1 460 66.7
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 6.0e-176 621.3 478 67.4
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.3e-173 613.6 477 66.5
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 6.9e-172 607.8 467 65.1
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.9e-169 599.7 481 64.0
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 9.3e-169 597.4 471 62.4
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 6.0e-168 594.7 465 66.0
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.3e-167 593.6 473 63.2
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 8.7e-167 590.9 470 63.0
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 4.3e-166 588.6 476 62.4
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 4.1e-164 582.0 471 60.9
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.5e-163 580.1 471 60.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.9e-162 575.9 459 62.1
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.9e-161 573.2 470 61.3
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.4e-159 567.0 474 60.3
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 2.8e-157 559.3 469 60.8
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.5e-155 553.5 479 59.9
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 1.3e-154 550.4 473 60.5
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 1.7e-154 550.1 464 58.6
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 8.5e-154 547.7 464 60.1
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 8.5e-154 547.7 468 60.7
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.9e-153 546.6 463 59.4
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.9e-153 546.6 465 59.4
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.2e-153 545.4 463 59.8
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 7.2e-153 544.7 464 58.2
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.4e-153 544.3 463 59.2
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 2.7e-152 542.7 463 59.8
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.4e-151 540.4 479 59.3
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.3e-151 539.7 463 59.0
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 8.8e-151 537.7 456 59.6
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.0e-150 536.6 463 58.7
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 2.0e-150 536.6 462 59.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.6e-150 536.2 464 58.4
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 2.2e-149 533.1 464 58.8
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.4e-148 530.4 457 58.9
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.4e-148 529.6 450 58.4
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 7.0e-148 528.1 458 57.6
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 4.5e-147 525.4 462 58.7
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 3.8e-146 522.3 464 57.5
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 4.2e-145 518.8 464 58.2
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 5.5e-145 518.5 464 57.8
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 8.0e-144 514.6 470 56.6
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 8.0e-144 514.6 487 56.9
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 2.3e-143 513.1 480 57.3
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.0e-142 510.0 467 57.0
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 3.3e-142 509.2 474 56.3
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 3.3e-142 509.2 474 55.3
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.1e-140 504.2 460 57.6
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 4.1e-140 502.3 459 56.6
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 5.3e-140 501.9 475 56.4
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 7.0e-140 501.5 475 56.4
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 9.1e-140 501.1 475 56.8
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.2e-139 500.7 482 55.6
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 2.6e-139 499.6 459 57.1
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.9e-138 496.1 469 55.4
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 8.5e-138 494.6 480 55.6
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.5e-137 491.9 482 55.8
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 5.2e-135 485.3 431 58.9
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.3e-133 480.7 447 55.3
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 3.7e-133 479.2 480 53.5
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.2e-131 474.2 484 52.1
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 4.2e-129 465.7 456 52.4
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 1.2e-126 457.6 473 52.4
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.0e-126 456.8 483 51.8
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.4e-126 455.7 324 70.4
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.7e-122 443.7 453 51.2
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 7.2e-121 438.3 465 49.0
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 5.2e-119 432.2 424 54.2
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.2e-119 432.2 468 50.9
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 4.1e-116 422.5 499 47.9
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.7e-114 417.2 457 49.5
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 3.3e-113 412.9 454 49.8
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 3.3e-113 412.9 456 49.8
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 6.4e-109 398.7 453 46.4
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 7.0e-108 395.2 457 47.5
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 6.0e-107 392.1 473 46.3
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.9e-105 387.1 453 47.9
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 2.5e-105 386.7 460 47.0
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 2.5e-105 386.7 460 47.0
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 1.6e-104 384.0 456 46.7
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.8e-104 383.3 458 47.6
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 3.4e-102 376.3 456 46.3
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 9.8e-102 374.8 460 46.5
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 2.9e-101 373.2 459 46.8
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 8.3e-101 371.7 460 46.1
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 2.4e-100 370.2 456 46.5
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 2.1e-99 367.1 324 61.7
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 7.5e-94 348.6 366 49.7
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.1e-92 344.7 282 63.1
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 5.1e-90 335.9 459 44.0
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.5e-86 324.3 326 56.4
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.3e-77 294.7 293 51.9
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 2.4e-76 290.4 491 34.2
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.5e-62 244.6 255 52.5
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.2e-59 235.0 349 41.5
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 3.5e-59 233.4 393 37.2
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.0e-58 231.9 528 32.2
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 4.8e-56 223.0 240 52.1
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.7e-46 189.1 150 61.3
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 7.2e-44 182.6 371 32.9
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.3e-34 151.0 194 45.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 3.7e-32 143.7 135 52.6
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 6.3e-32 142.9 558 23.8
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 7.0e-31 139.4 121 57.0
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.2e-30 138.7 101 63.4
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.4e-28 129.0 102 59.8
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.0e-26 125.6 87 73.6
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.0e-25 121.3 91 63.7
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 3.3e-25 120.6 84 73.8
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 1.4e-23 115.2 106 50.0
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.2e-22 112.1 167 37.1
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.0e-18 97.4 80 58.8
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.0e-18 97.1 251 31.9
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 3.7e-16 90.5 93 46.2
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 9.1e-15 85.9 141 41.8


User provided reference genes

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