Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.7e-87 326.2 201 100.0
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.9e-86 322.8 201 99.0
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.3e-42 177.2 209 57.9
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 1.9e-41 173.3 210 54.8
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 3.5e-40 169.1 162 66.0
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 4.6e-40 168.7 178 60.1
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 6.0e-40 168.3 212 55.2
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 1.3e-39 167.2 196 56.1
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 3.0e-39 166.0 172 58.1
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 3.9e-39 165.6 172 59.3
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 8.6e-39 164.5 164 61.6
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 3.6e-37 159.1 202 62.9
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 6.2e-37 158.3 187 56.7
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 3.1e-36 156.0 196 52.6
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 6.8e-36 154.8 163 58.9
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 2.0e-35 153.3 113 71.7
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 3.4e-35 152.5 208 51.4
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 5.8e-35 151.8 103 75.7
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 7.5e-35 151.4 181 55.8
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.5e-35 151.4 181 56.9
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 7.5e-35 151.4 162 57.4
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 9.9e-35 151.0 158 61.4
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 9.9e-35 151.0 189 54.0
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 9.9e-35 151.0 154 61.0
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 2.9e-34 149.4 132 62.9
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.9e-33 146.7 200 49.5
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 1.9e-33 146.7 148 60.1
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.9e-33 146.7 207 49.3
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 2.4e-33 146.4 108 73.1
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 3.2e-33 146.0 129 65.1
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 5.4e-33 145.2 204 49.0
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 7.1e-33 144.8 154 61.0
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 1.2e-32 144.1 172 54.7
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.2e-32 144.1 207 48.3
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 2.7e-32 142.9 96 80.2
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 3.5e-32 142.5 108 70.4
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 4.6e-32 142.1 134 64.2
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 6.0e-32 141.7 122 66.4
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 1.0e-31 141.0 148 60.8
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 1.7e-31 140.2 166 51.8
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 1.7e-31 140.2 202 50.0
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.7e-31 140.2 136 62.5
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 2.3e-31 139.8 162 53.1
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 3.0e-31 139.4 158 55.1
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 8.6e-31 137.9 128 64.1
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 8.6e-31 137.9 157 54.8
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 1.1e-30 137.5 196 48.5
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 4.3e-30 135.6 106 71.7
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 4.3e-30 135.6 106 71.7
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 4.3e-30 135.6 143 62.9
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 4.3e-30 135.6 118 66.1
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 7.3e-30 134.8 85 83.5
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 9.5e-30 134.4 143 62.9
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 9.5e-30 134.4 164 56.7
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 1.2e-29 134.0 136 64.7
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 1.6e-29 133.7 165 56.4
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 2.1e-29 133.3 168 54.2
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 2.1e-29 133.3 155 55.5
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 2.1e-29 133.3 195 53.3
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 2.1e-29 133.3 109 69.7
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 2.8e-29 132.9 206 45.6
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.6e-29 132.5 194 53.1
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.6e-29 132.5 143 62.9
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 3.6e-29 132.5 161 57.1
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 6.2e-29 131.7 87 78.2
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 8.1e-29 131.3 198 47.5
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.1e-28 131.0 141 58.2
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 1.4e-28 130.6 198 47.5
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 3.1e-28 129.4 115 63.5
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 5.2e-28 128.6 146 58.9
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 6.8e-28 128.3 88 78.4
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.5e-27 127.1 202 56.4
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 1.5e-27 127.1 152 53.3
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 2.0e-27 126.7 153 54.9
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 2.0e-27 126.7 90 75.6
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 4.4e-27 125.6 144 58.3
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 5.8e-27 125.2 85 80.0
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 1.9e-25 120.2 87 74.7
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 3.2e-25 119.4 147 53.1
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 4.2e-25 119.0 112 64.3
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.2e-25 119.0 134 59.0
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 1.2e-24 117.5 148 52.7
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.6e-24 117.1 151 52.3
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 2.1e-24 116.7 141 51.1
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 3.5e-24 115.9 94 64.9
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 3.5e-24 115.9 144 53.5
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 6.0e-24 115.2 144 53.5
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 6.0e-24 115.2 144 53.5
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 6.0e-24 115.2 86 69.8
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 1.3e-23 114.0 149 52.3
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 1.3e-23 114.0 99 64.6
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 1.3e-23 114.0 143 48.3
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 3.0e-23 112.8 146 52.7
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 3.9e-23 112.5 129 55.0
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 8.7e-23 111.3 86 72.1
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.5e-22 110.5 133 52.6
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 3.3e-22 109.4 156 50.6
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 5.6e-22 108.6 158 47.5
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 5.6e-22 108.6 123 65.0
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 7.3e-22 108.2 136 51.5
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 1.2e-21 107.5 119 59.7
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.6e-21 107.1 144 51.4
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 3.6e-21 105.9 97 61.9
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 3.6e-21 105.9 150 49.3
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 1.1e-20 104.4 101 57.4
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 1.4e-20 104.0 74 71.6
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 2.4e-20 103.2 150 50.7
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 2.6e-19 99.8 150 48.7
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 9.9e-19 97.8 100 54.0
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 1.7e-18 97.1 94 56.4
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 8.4e-18 94.7 81 64.2
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 1.1e-17 94.4 115 53.0
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 1.4e-17 94.0 128 52.3
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 7.1e-17 91.7 82 62.2
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 7.1e-17 91.7 75 65.3
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 9.3e-17 91.3 97 53.6
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 1.2e-16 90.9 98 57.1
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 7.8e-16 88.2 122 50.8
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 3.0e-15 86.3 156 45.5
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.1e-14 84.3 89 53.9
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 5.3e-12 75.5 86 55.8
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 3.4e-11 72.8 105 52.4
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.4e-11 72.8 105 52.4
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 4.5e-11 72.4 113 44.2
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.5e-11 72.4 103 53.4
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.5e-11 72.4 103 53.4
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 2.1e-08 63.5 115 41.7
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 1.3e-07 60.8 154 35.1


User provided reference genes

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