Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 2.5e-51 205.3 114 100.0
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.5e-43 178.7 130 83.1
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 6.6e-20 100.9 133 47.4
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 1.4e-17 93.2 132 47.0
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 2.4e-17 92.4 131 48.9
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 5.3e-17 91.3 130 44.6
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 9.0e-17 90.5 130 47.7
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 2.0e-16 89.4 132 47.0
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 1.3e-15 86.7 133 48.9
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 1.7e-15 86.3 132 38.6
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.2e-15 85.9 132 53.8
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 2.2e-15 85.9 132 47.0
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 2.2e-15 85.9 131 47.3
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 3.8e-15 85.1 132 48.5
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 4.9e-15 84.7 132 41.7
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 6.4e-15 84.3 132 40.9
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 8.4e-15 84.0 122 43.4
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 1.1e-14 83.6 135 48.1
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 1.1e-14 83.6 80 58.8
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 1.4e-14 83.2 128 45.3
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 1.4e-14 83.2 133 44.4
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 1.9e-14 82.8 132 47.7
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 4.2e-14 81.6 132 44.7
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 4.2e-14 81.6 79 60.8
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 5.4e-14 81.3 130 40.8
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 5.4e-14 81.3 133 44.4
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 5.4e-14 81.3 131 39.7
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 5.4e-14 81.3 81 61.7
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 2.1e-13 79.3 134 47.0
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 2.7e-13 79.0 81 59.3
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 2.7e-13 79.0 132 44.7
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 3.5e-13 78.6 131 42.0
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 3.5e-13 78.6 131 38.9
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 7.9e-13 77.4 132 46.2
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 7.9e-13 77.4 133 40.6
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 7.9e-13 77.4 133 45.9
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 7.9e-13 77.4 131 41.2
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 7.9e-13 77.4 133 42.9
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 1.0e-12 77.0 80 53.8
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 2.3e-12 75.9 132 43.2
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 2.3e-12 75.9 133 41.4
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 3.0e-12 75.5 131 44.3
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 3.0e-12 75.5 80 53.8
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 3.9e-12 75.1 132 39.4
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 6.7e-12 74.3 132 44.7
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 6.7e-12 74.3 132 42.4
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 8.7e-12 73.9 134 47.8
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 1.1e-11 73.6 80 50.0
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 1.5e-11 73.2 133 46.6
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 1.5e-11 73.2 131 44.3
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 1.9e-11 72.8 133 39.8
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 3.3e-11 72.0 132 40.2
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 3.3e-11 72.0 131 41.2
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 3.3e-11 72.0 80 47.5
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 5.6e-11 71.2 133 39.1
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 9.6e-11 70.5 131 43.5
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 1.3e-10 70.1 77 51.9
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 1.3e-10 70.1 132 43.2
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 1.6e-10 69.7 78 47.4
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 1.6e-10 69.7 84 58.3
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 1.6e-10 69.7 132 40.9
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 2.1e-10 69.3 132 43.9
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 2.8e-10 68.9 130 37.7
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 2.8e-10 68.9 133 42.1
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 6.2e-10 67.8 128 46.1
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 8.1e-10 67.4 80 58.8
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 1.1e-09 67.0 131 35.9
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 1.1e-09 67.0 79 46.8
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 1.4e-09 66.6 133 37.6
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 1.8e-09 66.2 128 44.5
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 1.8e-09 66.2 131 42.7
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 1.8e-09 66.2 131 43.5
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 1.8e-09 66.2 133 39.8
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 1.8e-09 66.2 134 42.5
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 2.4e-09 65.9 133 40.6
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 2.4e-09 65.9 132 37.1
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 2.4e-09 65.9 129 41.1
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 3.1e-09 65.5 130 36.2
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 3.1e-09 65.5 130 36.2
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 3.1e-09 65.5 129 33.3
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 4.0e-09 65.1 132 44.7
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 4.0e-09 65.1 132 34.8
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 4.0e-09 65.1 133 35.3
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.3e-09 64.7 130 36.2
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.3e-09 64.7 130 36.2
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 6.9e-09 64.3 131 42.0
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 6.9e-09 64.3 132 40.9
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 9.0e-09 63.9 137 36.5
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 1.2e-08 63.5 131 37.4
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 1.5e-08 63.2 130 32.3
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 2.0e-08 62.8 74 59.5
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 2.0e-08 62.8 101 37.6
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 3.4e-08 62.0 130 35.4
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 3.4e-08 62.0 126 34.9
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 3.4e-08 62.0 130 33.1
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 5.8e-08 61.2 130 36.9
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 5.8e-08 61.2 109 40.4
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 7.6e-08 60.8 129 31.8
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 1.3e-07 60.1 126 33.3
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 1.3e-07 60.1 129 31.8
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 2.2e-07 59.3 139 39.6
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 3.8e-07 58.5 142 38.7
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 4.9e-07 58.2 78 38.5
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 6.4e-07 57.8 130 33.1
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 6.4e-07 57.8 130 33.1
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 1.1e-06 57.0 139 38.8


User provided reference genes

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