Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.1e-237 824.3 416 100.0
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.6e-226 786.6 426 94.6
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.0e-224 781.2 399 98.5
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-223 779.2 399 98.0
CSS0046859 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.9e-222 775.0 416 95.4
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.1e-216 755.0 425 91.8
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-215 752.7 398 96.2
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.9e-213 745.7 426 89.7
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.3e-210 734.6 399 94.0
CSS0001042 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-86 323.2 180 84.4
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.0e-51 205.7 417 33.8
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.6e-50 204.5 418 33.0
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-50 203.8 418 33.0
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-50 203.8 418 32.8
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.5e-50 203.4 418 33.5
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.9e-50 202.6 418 33.5
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.9e-50 202.6 418 33.5
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-49 201.1 426 32.9
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.2e-49 200.7 417 33.3
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.9e-49 200.3 410 33.4
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.5e-49 198.7 425 32.2
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.9e-48 197.6 417 32.6
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-48 196.1 425 31.8
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.8e-46 191.0 417 32.1
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.8e-46 188.7 337 34.4
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.8e-46 188.7 337 34.4
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.8e-46 188.7 337 34.4
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.8e-46 188.7 337 34.4
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-45 188.0 337 34.4
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-45 188.0 337 34.4
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-45 186.8 337 34.4
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 5.5e-40 169.5 356 33.1
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 5.0e-33 146.4 355 29.0
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.8e-30 137.9 402 27.4
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.8e-30 137.9 402 27.4
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.4e-29 133.7 407 28.5
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.4e-29 133.3 454 28.2
CSS0008852 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.3e-28 131.7 321 29.9
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.3e-28 131.7 412 28.2
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.7e-28 130.2 453 27.8
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.7e-28 130.2 396 26.0
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 1.8e-27 127.9 181 36.5
CSS0000781 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 5.9e-26 122.9 329 28.6
CSS0050301 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.3e-25 120.9 330 28.2
TWI59G0944 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 6.6e-25 119.4 402 27.4
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-24 118.6 393 26.7
CSS0009580 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.5e-24 117.5 329 28.0
CSS0012098 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 9.5e-24 115.5 329 27.7
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 9.5e-24 115.5 375 28.8
CSS0050518 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.7e-23 113.2 246 30.5
CSS0039395 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.2e-23 112.8 323 29.1
CSS0030886 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 8.0e-23 112.5 262 28.2
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.0e-22 110.2 442 27.6
CSS0030799 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.8e-22 109.4 444 25.9
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.5e-21 108.2 397 25.2
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.4e-21 107.1 305 26.6
CSS0038166 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.3e-20 105.1 258 26.7
vmacro00756 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 2.9e-20 104.0 384 25.3
CSS0018852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.9e-20 103.2 266 27.8
CSS0029864 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.9e-20 103.2 402 25.6
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 1.9e-19 101.3 187 33.2
CSS0032852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.1e-19 100.1 432 25.5
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-18 98.6 398 27.1
CSS0040996 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.0e-18 97.8 312 24.7
CSS0043631 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.0e-18 97.8 329 24.6
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.7e-18 97.4 205 32.2
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.6e-18 96.7 384 25.3
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.0e-18 96.3 205 31.7
CSS0037995 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 7.8e-18 95.9 327 27.2
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-17 95.5 157 34.4
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-17 95.1 251 25.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-17 95.1 251 25.9
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-17 95.1 251 25.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-17 94.7 157 35.0
vmacro19839 Vaccinium macrocarpon HOM05D008484 ORTHO05D007523 3.0e-17 94.0 228 29.4
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.9e-16 91.3 333 25.2
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 3.3e-16 90.5 412 24.0
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-16 90.1 351 26.2
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.5e-16 89.0 420 22.4
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 9.5e-16 89.0 413 23.7
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-15 88.2 352 27.3
CSS0010228 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.8e-15 87.4 341 24.0
CSS0034164 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.8e-15 87.4 306 26.5
TWI38G0209 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.6e-15 87.0 169 36.7
CSS0020586 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.7e-15 86.7 387 23.0
CSS0043583 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 6.2e-15 86.3 164 29.9
vmacro17715 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 8.1e-15 85.9 190 30.5
vmacro23365 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.8e-14 84.7 190 30.0
CSS0028075 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112595 2.3e-14 84.3 317 24.9
CSS0021465 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.2e-14 83.2 320 24.1
CSS0022760 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.2e-14 83.2 349 23.2
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 8.9e-14 82.4 305 24.3
CSS0030913 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110203 1.2e-13 82.0 292 25.7
CSS0018760 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.0e-13 81.3 198 31.8
CSS0030923 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.0e-13 81.3 167 29.3
CSS0045699 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.0e-13 81.3 167 29.3
CSS0030123 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.6e-13 80.9 346 22.3
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 2.6e-13 80.9 384 23.4
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 3.4e-13 80.5 125 34.4
CSS0011419 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.9e-13 79.0 159 32.1
CSS0024354 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 9.9e-13 79.0 339 23.6
CSS0036762 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.9e-13 79.0 294 25.9
CSS0008783 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.9e-12 76.6 316 23.1
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 4.9e-12 76.6 314 22.6
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.3e-12 75.9 448 22.5
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 8.3e-12 75.9 450 22.7
FvH4_3g25201 Fragaria vesca HOM05D003258 ORTHO05D010059 1.4e-11 75.1 341 24.6
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.1e-11 72.8 100 35.0
FvH4_4g04830 Fragaria vesca HOM05D003258 ORTHO05D010103 1.6e-10 71.6 336 24.1
Rhsim01G0161300 Rhododendron simsii HOM05D027677 ORTHO05D339865 1.6e-10 71.6 62 45.2
Rhsim09G0061900 Rhododendron simsii HOM05D027677 ORTHO05D338825 1.6e-10 71.6 74 37.8
RhsimUnG0192900 Rhododendron simsii HOM05D017774 ORTHO05D013099 2.1e-10 71.2 74 43.2
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 3.5e-10 70.5 336 24.1
Dinv04550 Davidia involucrata HOM05D000065 ORTHO05D000162 1.3e-09 68.6 220 28.2
CSS0040832 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109556 3.0e-09 67.4 308 22.1
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 5.1e-09 66.6 364 22.8
TWI38G2357 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 8.6e-09 65.9 100 41.0
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-08 65.5 307 21.5
RcHm_v2.0_Chr1g0358931 Rosa chinensis HOM05D003258 ORTHO05D010059 1.1e-08 65.5 144 30.6
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-08 65.5 182 23.6
CSS0009122 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109114 1.5e-08 65.1 274 25.9
Rhsim09G0062700 Rhododendron simsii HOM05D027677 ORTHO05D338544 1.5e-08 65.1 58 41.4
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-08 64.7 415 20.7
Rhsim02G0150000 Rhododendron simsii HOM05D017774 ORTHO05D013099 1.9e-08 64.7 135 29.6
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-08 64.7 324 23.5
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-08 64.7 324 23.5
CSS0050368 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112446 3.3e-08 63.9 314 24.2
CSS0028748 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110352 4.3e-08 63.5 232 24.6
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.3e-08 63.5 159 27.7
CSS0025792 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109058 9.5e-08 62.4 434 23.5
CSS0001885 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-07 62.0 115 32.2
CSS0027797 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-07 62.0 115 32.2
CSS0028780 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-07 62.0 115 32.2
CSS0004606 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-07 61.6 115 32.2
CSS0033748 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-07 61.6 115 32.2
CSS0003389 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-07 60.5 98 38.8
CSS0006796 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-07 60.5 94 37.2
CSS0034588 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-07 60.5 120 35.8
FAN04G3025 Fragaria x ananassa HOM05D003258 ORTHO05D010059 3.6e-07 60.5 164 28.0
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.6e-07 60.5 127 29.9
CSS0006459 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.7e-07 60.1 82 37.8
CSS0044012 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D108943 4.7e-07 60.1 220 25.0
RhsimUnG0042600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-07 60.1 461 21.3
CSS0032142 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.2e-07 59.7 98 38.8
FvH4_7g04380 Fragaria vesca HOM05D003258 ORTHO05D010059 6.2e-07 59.7 197 25.4
CSS0020556 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-06 58.9 94 36.2
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-06 58.9 143 28.0
CSS0047379 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-06 58.5 94 38.3
FvH4_7g04250 Fragaria vesca HOM05D003258 ORTHO05D010059 1.8e-06 58.2 241 24.9
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-06 58.2 121 25.6
FvH4_3g24490 Fragaria vesca HOM05D003258 ORTHO05D010059 2.4e-06 57.8 197 24.9
FvH4_3g33780 Fragaria vesca HOM05D003258 ORTHO05D010059 2.4e-06 57.8 197 24.9
CSS0047074 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.1e-06 57.4 117 33.3
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 3.1e-06 57.4 410 22.9
CSS0045406 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D111373 4.0e-06 57.0 222 24.3
FvH4_4g09870 Fragaria vesca HOM05D003258 ORTHO05D010059 4.0e-06 57.0 197 24.9
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 4.0e-06 57.0 263 26.6
CSS0013888 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.2e-06 56.6 115 31.3
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 263 26.6
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.2e-06 56.6 121 25.6
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.2e-06 56.6 121 25.6
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 263 26.6
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 263 26.6
CSS0007091 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109861 6.8e-06 56.2 220 24.1
CSS0032655 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112617 6.8e-06 56.2 172 26.7
FvH4_6g36690 Fragaria vesca HOM05D003258 ORTHO05D010059 6.8e-06 56.2 197 24.4


User provided reference genes

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