Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 3.8e-115 418.3 229 100.0
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 9.1e-69 264.2 256 66.8
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 4.2e-66 255.4 261 62.8
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 2.2e-59 233.0 169 80.5
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 1.1e-58 230.7 185 73.5
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.4e-56 223.8 222 63.1
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.8e-56 223.4 232 60.3
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 2.3e-56 223.0 159 78.0
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 5.2e-56 221.9 161 77.6
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 1.5e-55 220.3 216 64.4
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 2.6e-55 219.5 161 78.3
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 2.6e-55 219.5 160 79.4
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 5.7e-55 218.4 160 76.9
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 1.3e-54 217.2 224 61.2
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 2.2e-54 216.5 160 77.5
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 2.8e-54 216.1 168 75.0
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 4.8e-54 215.3 221 60.6
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 4.8e-54 215.3 208 64.4
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 4.8e-54 215.3 196 68.4
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 8.3e-54 214.5 178 74.7
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.4e-53 213.8 222 60.8
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.8e-53 213.4 178 74.2
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 1.8e-53 213.4 178 74.2
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 3.1e-53 212.6 160 75.0
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 4.1e-53 212.2 161 77.6
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 5.4e-53 211.8 159 76.1
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 5.4e-53 211.8 223 61.0
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 9.1e-53 211.1 148 80.4
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.2e-52 210.7 204 65.7
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.6e-52 210.3 191 67.5
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.6e-52 210.3 191 67.5
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 1.6e-52 210.3 191 66.0
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 1.6e-52 210.3 164 75.0
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.6e-52 210.3 178 73.0
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.0e-52 209.9 191 67.5
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 4.5e-52 208.8 159 75.5
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 7.7e-52 208.0 192 66.7
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 7.7e-52 208.0 220 60.9
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 1.0e-51 207.6 232 58.2
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 1.0e-51 207.6 191 68.1
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.3e-51 207.2 225 60.9
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 1.7e-51 206.8 160 77.5
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.7e-51 206.8 222 59.9
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 2.3e-51 206.5 186 67.2
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 2.3e-51 206.5 159 74.2
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 2.9e-51 206.1 163 74.2
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 6.6e-51 204.9 247 57.1
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 1.1e-50 204.1 173 71.1
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.5e-50 203.8 161 75.2
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 2.5e-50 203.0 162 75.9
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 2.5e-50 203.0 166 74.7
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 3.3e-50 202.6 163 71.8
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 5.5e-50 201.8 162 75.3
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 5.5e-50 201.8 199 61.3
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 7.2e-50 201.4 162 74.1
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 7.2e-50 201.4 245 54.3
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 9.5e-50 201.1 192 60.9
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.2e-49 200.7 160 75.0
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.6e-49 200.3 191 65.4
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 2.1e-49 199.9 161 71.4
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 6.1e-49 198.4 161 72.0
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 8.0e-49 198.0 169 68.6
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 6.8e-48 194.9 176 65.3
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 8.9e-48 194.5 170 71.2
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 8.9e-48 194.5 200 59.5
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 1.2e-47 194.1 137 76.6
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 1.5e-47 193.7 205 61.5
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 3.4e-47 192.6 142 76.8
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 7.5e-47 191.4 160 71.2
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 1.3e-46 190.7 224 57.6
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 3.7e-46 189.1 167 65.3
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 3.7e-46 189.1 167 65.3
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 4.9e-46 188.7 167 65.9
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.1e-45 187.6 160 68.8
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 1.8e-45 186.8 164 69.5
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 9.2e-45 184.5 208 55.8
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 1.6e-44 183.7 160 65.6
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.6e-44 183.7 160 68.1
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.6e-44 183.7 209 58.4
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 5.9e-44 181.8 165 65.5
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 1.0e-43 181.0 157 68.8
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 1.0e-43 181.0 138 73.2
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 1.0e-43 181.0 121 79.3
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.3e-43 180.6 166 65.7
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 1.3e-43 180.6 139 72.7
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 1.3e-43 180.6 145 70.3
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 1.7e-43 180.3 195 58.5
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.7e-43 180.3 177 63.3
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 2.3e-43 179.9 189 59.3
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 2.9e-43 179.5 161 65.2
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 2.9e-43 179.5 161 65.2
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 2.9e-43 179.5 161 65.2
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 3.9e-43 179.1 161 67.1
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 5.0e-43 178.7 197 57.9
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 6.6e-43 178.3 121 81.0
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 6.6e-43 178.3 168 64.9
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 8.6e-43 177.9 188 59.0
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 8.6e-43 177.9 161 64.6
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 8.6e-43 177.9 189 58.7
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 8.6e-43 177.9 189 58.7
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.1e-42 177.6 160 67.5
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 3.3e-42 176.0 207 55.1
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 3.3e-42 176.0 165 63.0
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 5.6e-42 175.3 127 74.8
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.6e-41 173.7 179 62.0
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 3.6e-41 172.6 127 74.0
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.0e-40 171.0 136 70.6
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 1.2e-39 167.5 184 56.5
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 3.4e-39 166.0 122 72.1
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 2.4e-37 159.8 189 53.4
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 9.2e-37 157.9 141 63.8
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 6.8e-32 141.7 171 53.2
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 2.6e-31 139.8 121 66.9
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 2.7e-28 129.8 156 52.6
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 3.3e-26 122.9 158 48.1
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 1.3e-22 110.9 96 63.5
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 1.7e-22 110.5 148 52.0
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.9e-21 107.1 135 48.1
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 7.8e-20 101.7 99 65.7
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 8.6e-19 98.2 190 36.8
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 3.4e-15 86.3 135 48.9
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 8.4e-14 81.6 149 40.3


User provided reference genes

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