Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.7e-96 355.9 173 100.0
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.1e-66 256.9 156 80.8
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 5.1e-64 248.1 160 76.2
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.9e-63 246.1 158 75.9
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 2.5e-63 245.7 150 78.0
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 5.6e-63 244.6 157 76.4
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.8e-62 242.3 150 76.7
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 3.7e-62 241.9 153 77.1
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 4.8e-62 241.5 146 77.4
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 8.1e-62 240.7 154 76.6
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 4.0e-61 238.4 148 74.3
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 5.3e-61 238.0 136 80.1
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 5.3e-61 238.0 155 74.2
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 5.3e-61 238.0 156 75.0
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.2e-60 236.9 138 77.5
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.5e-60 236.5 152 73.7
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.5e-60 236.5 149 73.8
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 2.6e-60 235.7 148 73.6
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 3.4e-60 235.3 148 73.6
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 3.4e-60 235.3 150 74.7
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 3.4e-60 235.3 156 72.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 4.5e-60 235.0 151 74.2
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 4.5e-60 235.0 148 74.3
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 4.5e-60 235.0 150 74.7
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 5.8e-60 234.6 151 72.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 5.8e-60 234.6 154 72.1
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 7.6e-60 234.2 148 73.0
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 7.6e-60 234.2 148 73.0
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 7.6e-60 234.2 163 69.3
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 7.6e-60 234.2 148 74.3
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 1.0e-59 233.8 158 71.5
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.0e-59 233.8 148 73.0
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 1.0e-59 233.8 148 73.0
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.7e-59 233.0 157 73.2
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.7e-59 233.0 151 72.8
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 2.2e-59 232.6 152 72.4
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 2.2e-59 232.6 155 71.6
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 2.2e-59 232.6 156 71.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 2.2e-59 232.6 151 72.8
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.9e-59 232.3 152 72.4
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.8e-59 231.9 138 76.1
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.8e-59 231.9 151 72.8
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 3.8e-59 231.9 150 74.0
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 6.5e-59 231.1 156 71.8
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 8.4e-59 230.7 138 74.6
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 8.4e-59 230.7 136 77.2
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.9e-58 229.6 154 73.4
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.9e-58 229.6 136 77.2
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.9e-58 229.6 157 70.7
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 2.5e-58 229.2 155 72.3
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 3.2e-58 228.8 147 70.7
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.2e-58 228.8 151 72.8
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 3.2e-58 228.8 146 73.3
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 7.1e-58 227.6 149 70.5
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 7.1e-58 227.6 134 78.4
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 9.3e-58 227.3 154 72.1
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.2e-57 226.9 138 73.9
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 1.2e-57 226.9 152 71.7
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.2e-57 226.9 152 71.7
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 1.6e-57 226.5 156 69.9
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.1e-57 226.1 155 71.0
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 2.7e-57 225.7 154 71.4
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.7e-57 225.7 152 71.1
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 3.5e-57 225.3 144 72.2
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 4.6e-57 224.9 156 69.9
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 7.9e-57 224.2 151 72.2
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.0e-56 223.8 161 65.2
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.0e-56 223.8 153 69.9
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.0e-56 223.8 137 76.6
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.0e-56 223.8 136 76.5
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 1.0e-56 223.8 156 69.2
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.0e-56 223.8 156 69.2
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.3e-56 223.4 140 73.6
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.8e-56 223.0 138 76.8
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 8.7e-56 220.7 138 73.9
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.5e-55 219.9 160 66.9
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 1.9e-55 219.5 139 74.8
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.3e-55 218.8 177 62.7
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.3e-55 218.8 138 72.5
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 4.3e-55 218.4 184 62.5
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 7.4e-55 217.6 139 72.7
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.3e-54 216.9 144 70.1
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.3e-54 216.9 144 70.1
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 1.1e-53 213.8 140 68.6
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 3.1e-53 212.2 127 78.0
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.1e-53 212.2 184 60.3
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.1e-53 212.2 136 69.9
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 5.3e-53 211.5 144 68.8
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 2.9e-51 205.7 166 61.4
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.2e-49 200.3 116 80.2
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 5.1e-48 194.9 221 48.9
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 4.3e-47 191.8 207 49.3
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 7.4e-47 191.0 116 75.9
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 3.7e-46 188.7 116 74.1
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 4.8e-46 188.3 116 73.3
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 4.8e-46 188.3 116 75.9
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 6.3e-46 188.0 116 75.9
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.2e-44 183.7 124 69.4
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 5.9e-44 181.4 116 71.6
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 6.5e-43 177.9 107 77.6
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.1e-42 177.2 106 77.4
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 2.3e-40 169.5 106 72.6
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 6.3e-38 161.4 97 73.2
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.8e-37 159.8 99 73.7
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 4.1e-37 158.7 126 61.9
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.6e-36 156.0 139 54.0
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 5.9e-36 154.8 154 50.0
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.3e-35 153.7 136 55.9
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 8.5e-35 151.0 94 76.6
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 8.2e-30 134.4 147 46.3
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.2e-28 130.6 73 86.3
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 4.5e-28 128.6 95 66.3
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.2e-27 126.3 91 65.9
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 8.8e-24 114.4 81 61.7
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 5.2e-16 88.6 104 46.2
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 2.0e-12 76.6 47 66.0
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 3.8e-11 72.4 41 80.5
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 3.2e-10 69.3 41 75.6
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 3.2e-10 69.3 41 75.6
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 3.2e-10 69.3 41 75.6
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.2e-10 69.3 42 71.4
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 3.2e-10 69.3 158 28.5
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 5.5e-10 68.6 41 75.6


User provided reference genes

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