Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0466 Ceratophyllum demersum HOM05D003177 ORTHO05D003481 1.4e-169 599.7 346 100.0
Nn1g03661 Nelumbo nucifera HOM05D003177 ORTHO05D003481 2.5e-62 243.4 341 42.2
TAR629G1976 Trochodendron aralioides HOM05D003177 ORTHO05D003481 4.6e-56 222.6 338 42.0
Dinv22304 Davidia involucrata HOM05D003177 ORTHO05D003481 1.0e-55 221.5 353 41.6
ATR0794G044 Amborella trichopoda HOM05D003177 ORTHO05D003481 3.9e-55 219.5 219 55.3
Gohir.A01G074600 Gossypium hirsutum HOM05D003177 ORTHO05D003481 5.6e-54 215.7 351 38.2
Gohir.D01G061200 Gossypium hirsutum HOM05D003177 ORTHO05D003481 9.6e-54 214.9 350 38.9
QL08p013313 Quercus lobata HOM05D003177 ORTHO05D003481 1.2e-53 214.5 205 51.7
Gorai.002G082600 Gossypium raimondii HOM05D003177 ORTHO05D003481 4.0e-52 209.5 350 38.0
Haze_09611 Corylus avellana HOM05D003177 ORTHO05D003481 5.8e-51 205.7 347 38.3
Duzib213G0670 Durio zibethinus HOM05D003177 ORTHO05D003481 5.8e-51 205.7 220 48.6
Cfa020414 Carpinus fangiana HOM05D003177 ORTHO05D003481 9.9e-51 204.9 208 51.4
TWI39G1173 Tripterygium wilfordii HOM05D003177 ORTHO05D003481 1.7e-50 204.1 343 37.9
Duzib268G0600 Durio zibethinus HOM05D003177 ORTHO05D003481 1.4e-49 201.1 346 37.3
Prupe.4G202300 Prunus persica HOM05D003177 ORTHO05D003481 1.6e-48 197.6 223 48.0
Actinidia10706 Actinidia chinensis HOM05D003177 ORTHO05D003481 4.6e-48 196.1 328 41.5
vmacro11767 Vaccinium macrocarpon HOM05D003177 ORTHO05D003481 1.0e-47 194.9 212 50.0
Sc19g0005960 Simmondsia chinensis HOM05D003177 ORTHO05D003481 1.3e-47 194.5 184 52.2
Aqoxy4G02069 Aquilegia oxysepala HOM05D003177 ORTHO05D003481 1.7e-47 194.1 205 48.8
Thecc.07G052500 Theobroma cacao HOM05D003177 ORTHO05D003481 1.7e-47 194.1 208 50.5
ClCG05G014770 Citrullus lanatus HOM05D003177 ORTHO05D003481 2.3e-47 193.7 206 50.0
MSTRG.14415 Avicennia marina HOM05D003177 ORTHO05D003481 5.1e-47 192.6 180 52.8
Sopen07g032250 Solanum pennellii HOM05D003177 ORTHO05D003481 5.1e-47 192.6 205 50.7
Solyc07g064110.3 Solanum lycopersicum HOM05D003177 ORTHO05D003481 1.5e-46 191.0 205 50.2
Eucgr.F03427 Eucalyptus grandis HOM05D003177 ORTHO05D003481 4.3e-46 189.5 224 47.3
Peaxi162Scf01086g00156 Petunia axillaris HOM05D003177 ORTHO05D003481 4.3e-46 189.5 177 53.7
CANSAT11G2707 Cannabis sativa HOM05D003177 ORTHO05D003481 1.3e-45 188.0 307 37.1
Duzib213G0184 Durio zibethinus HOM05D003177 ORTHO05D003481 1.6e-45 187.6 208 47.1
Potri.011G133100 Populus trichocarpa HOM05D003177 ORTHO05D003481 2.8e-45 186.8 192 46.4
CsaV3_3G022860 Cucumis sativus L. HOM05D003177 ORTHO05D003481 1.1e-44 184.9 207 48.8
CsaV3_UNG228980 Cucumis sativus L. HOM05D003177 ORTHO05D003481 1.1e-44 184.9 207 48.8
DCAR_008676 Daucus carota HOM05D003177 ORTHO05D003481 1.4e-44 184.5 177 50.8
MELO3C018128.2 Cucumis melo HOM05D003177 ORTHO05D003481 2.4e-44 183.7 337 38.0
Oeu007628.1 Olea europaea HOM05D003177 ORTHO05D003481 2.4e-44 183.7 218 45.4
Lalb_Chr19g0134751 Lupinus albus HOM05D003177 ORTHO05D003481 3.1e-44 183.3 172 54.7
VMungo1127G0088 Vigna mungo HOM05D003177 ORTHO05D003481 3.1e-44 183.3 175 50.3
Ciclev10008319m.g Citrus clementina HOM05D003177 ORTHO05D003481 5.3e-44 182.6 206 46.6
MD03G1211600 Malus domestica HOM05D003177 ORTHO05D003481 6.9e-44 182.2 202 48.0
Sed0011296 Sechium edule HOM05D003177 ORTHO05D003481 9.0e-44 181.8 206 46.6
Ciclev10008519m.g Citrus clementina HOM05D003177 ORTHO05D003481 1.2e-43 181.4 206 46.6
Hma1.2p1_1546F.1_g289980 Hydrangea macrophylla HOM05D003177 ORTHO05D003481 2.0e-43 180.6 211 46.9
Lj3g0022760 Lotus japonicus HOM05D003177 ORTHO05D003481 2.0e-43 180.6 175 49.7
CAN.G337.89 Capsicum annuum HOM05D003177 ORTHO05D003481 2.6e-43 180.3 172 50.6
Ca_18849_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 3.4e-43 179.9 175 47.4
Glyma.06G268800 Glycine max HOM05D003177 ORTHO05D003481 3.4e-43 179.9 204 45.1
Lj3g0020379 Lotus japonicus HOM05D003177 ORTHO05D003481 3.4e-43 179.9 186 47.3
Lalb_Chr14g0366151 Lupinus albus HOM05D003177 ORTHO05D003481 4.5e-43 179.5 175 49.7
Cc05_g13250 Coffea canephora HOM05D003177 ORTHO05D003481 5.8e-43 179.1 206 47.1
SHI50408 Sapria himalayana HOM05D003177 ORTHO05D003481 5.8e-43 179.1 197 45.7
COL.COLO4_09572 Corchorus olitorius HOM05D003177 ORTHO05D003481 7.6e-43 178.7 192 47.4
Ca_01752_v3 Cicer arietinum L. HOM05D003177 ORTHO05D003481 1.3e-42 177.9 178 47.8
arahy.Tifrunner.gnm1.ann1.2TAV4H Arachis hypogaea HOM05D003177 ORTHO05D003481 1.7e-42 177.6 190 46.8
Medtr2g082940 Medicago truncatula HOM05D003177 ORTHO05D003481 1.7e-42 177.6 178 47.2
arahy.Tifrunner.gnm1.ann1.LL10MS Arachis hypogaea HOM05D003177 ORTHO05D003481 2.2e-42 177.2 190 46.8
CAN.G337.147 Capsicum annuum HOM05D003177 ORTHO05D003481 2.2e-42 177.2 172 50.0
RcHm_v2.0_Chr4g0410111 Rosa chinensis HOM05D003177 ORTHO05D003481 2.9e-42 176.8 208 45.2
arahy.Tifrunner.gnm1.ann1.JSI4TH Arachis hypogaea HOM05D003177 ORTHO05D003481 4.9e-42 176.0 211 43.1
Migut.H01856 Erythranthe guttata HOM05D003177 ORTHO05D003481 4.9e-42 176.0 180 46.1
Potri.001G417400 Populus trichocarpa HOM05D003177 ORTHO05D003481 4.9e-42 176.0 181 46.4
RcHm_v2.0_Chr5g0037541 Rosa chinensis HOM05D003177 ORTHO05D003481 4.9e-42 176.0 208 45.2
Phvul.003G295700 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 6.4e-42 175.6 157 52.9
arahy.Tifrunner.gnm1.ann1.P62B18 Arachis hypogaea HOM05D003177 ORTHO05D003481 1.1e-41 174.9 205 43.4
arahy.Tifrunner.gnm1.ann1.W18Y25 Arachis hypogaea HOM05D003177 ORTHO05D003481 1.1e-41 174.9 205 43.9
EL10Ac4g07970 Beta vulgaris HOM05D003177 ORTHO05D003481 1.1e-41 174.9 215 45.1
Sed0011648 Sechium edule HOM05D003177 ORTHO05D003481 1.1e-41 174.9 334 37.1
TPR.G36746 Trifolium pratense HOM05D003177 ORTHO05D003481 1.9e-41 174.1 178 47.2
Glyma.12G214200 Glycine max HOM05D003177 ORTHO05D003481 2.4e-41 173.7 186 47.8
arahy.Tifrunner.gnm1.ann1.7VJC80 Arachis hypogaea HOM05D003177 ORTHO05D003481 3.2e-41 173.3 205 43.4
Lsat_1_v5_gn_5_5721 Lactuca sativa HOM05D003177 ORTHO05D003481 3.2e-41 173.3 185 43.8
Cpa.g.sc97.66 Carica papaya HOM05D003177 ORTHO05D003481 5.4e-41 172.6 210 45.2
arahy.Tifrunner.gnm1.ann1.Y3PJTZ Arachis hypogaea HOM05D003177 ORTHO05D003481 7.1e-41 172.2 205 42.9
Psat7g161600 Pisum sativum HOM05D003177 ORTHO05D003481 7.1e-41 172.2 175 46.9
arahy.Tifrunner.gnm1.ann1.2UU78P Arachis hypogaea HOM05D003177 ORTHO05D003481 1.6e-40 171.0 193 44.6
arahy.Tifrunner.gnm1.ann1.LTHE3G Arachis hypogaea HOM05D003177 ORTHO05D003481 1.6e-40 171.0 205 42.4
Os02g0132600 Oryza sativa ssp. japonica HOM05D003177 ORTHO05D003481 2.1e-40 170.6 226 40.7
TPR.G25924 Trifolium pratense HOM05D003177 ORTHO05D003481 2.1e-40 170.6 175 47.4
Psat5g251840 Pisum sativum HOM05D003177 ORTHO05D003481 2.7e-40 170.2 175 45.7
HanXRQChr05g0159201 Helianthus annuus HOM05D003177 ORTHO05D003481 7.9e-40 168.7 166 51.2
VMungo1080G1398 Vigna mungo HOM05D003177 ORTHO05D003481 1.0e-39 168.3 192 45.8
Sabra16G0283700 Salix brachista HOM05D003177 ORTHO05D003481 1.8e-39 167.5 181 44.8
AUR62020553 Chenopodium quinoa HOM05D003177 ORTHO05D003481 5.1e-39 166.0 192 42.7
PGR031G3084 Punica granatum HOM05D003177 ORTHO05D003481 1.1e-38 164.9 205 41.5
SGA_v2.0_scaffold9G05037 Striga asiatica HOM05D003177 ORTHO05D003481 5.6e-38 162.5 178 44.9
PSO675G6436 Papaver somniferum HOM05D003177 ORTHO05D003481 9.6e-38 161.8 168 45.2
PSO541G2106 Papaver somniferum HOM05D003177 ORTHO05D003481 1.3e-37 161.4 168 45.2
AUR62015646 Chenopodium quinoa HOM05D003177 ORTHO05D003481 1.6e-37 161.0 189 42.3
Ah.06g183030 Amaranthus hybridus HOM05D003177 ORTHO05D003481 2.1e-37 160.6 207 42.5
Zm00001eb231370 Zea mays HOM05D003177 ORTHO05D003481 6.2e-37 159.1 177 43.5
THA.LOC104813041 Tarenaya hassleriana HOM05D003177 ORTHO05D003481 8.1e-37 158.7 178 42.1
Nitab4.5_0000397g0040 Nicotiana tabacum HOM05D003177 ORTHO05D003481 1.8e-36 157.5 136 55.1
FAN21G2694 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.1e-36 156.8 165 47.9
FAN21G3709 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.1e-36 156.8 165 47.9
Nitab4.5_0009192g0010 Nicotiana tabacum HOM05D003177 ORTHO05D003481 4.0e-36 156.4 135 55.6
Sp6g04150 Schrenkiella parvula HOM05D003177 ORTHO05D003481 1.2e-35 154.8 209 41.1
FvH4_3g21820 Fragaria vesca HOM05D003177 ORTHO05D003481 1.5e-35 154.5 159 49.1
FAN11G2546 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.5e-35 154.5 159 49.1
FAN06G1056 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.6e-35 153.7 180 45.6
Carub.0006s3271 Capsella rubella HOM05D003177 ORTHO05D003481 4.5e-35 152.9 183 43.7
Lj4g0006066 Lotus japonicus HOM05D003177 ORTHO05D003481 4.5e-35 152.9 155 49.0
FAN25G3665 Fragaria x ananassa HOM05D003177 ORTHO05D003481 7.6e-35 152.1 158 48.1
FAN10G2257 Fragaria x ananassa HOM05D003177 ORTHO05D003481 9.9e-35 151.8 180 44.4
Manes.03G122901 Manihot esculenta HOM05D003177 ORTHO05D003481 1.3e-34 151.4 142 48.6
Thhalv10028431m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 1.7e-34 151.0 209 40.2
FvH4_7g08040 Fragaria vesca HOM05D003177 ORTHO05D003481 2.9e-34 150.2 180 44.4
FAN01G1176 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.8e-34 149.8 180 44.4
FAN03G0141 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.9e-34 149.4 180 43.9
CARHR252740 Cardamine hirsuta HOM05D003177 ORTHO05D003481 6.4e-34 149.1 209 41.1
ECA246G0280 Erigeron canadensis HOM05D003177 ORTHO05D003481 6.4e-34 149.1 160 41.2
BolC9t56146H Brassica oleracea HOM05D003177 ORTHO05D003481 2.5e-33 147.1 209 41.1
HPP92_004136 Vanilla planifolia HOM05D003177 ORTHO05D003481 7.1e-33 145.6 210 41.9
BraA09t38176Z Brassica rapa HOM05D003177 ORTHO05D003481 2.7e-32 143.7 209 40.2
BcaC04g21326 Brassica carinata HOM05D003177 ORTHO05D003481 3.5e-32 143.3 209 40.2
C09p33110 Brassica napus HOM05D003177 ORTHO05D003481 3.5e-32 143.3 209 40.2
BolC1t01542H Brassica oleracea HOM05D003177 ORTHO05D003481 4.6e-32 142.9 213 40.4
BcaB01g01838 Brassica carinata HOM05D003177 ORTHO05D003481 7.9e-32 142.1 210 40.0
A09p26090 Brassica napus HOM05D003177 ORTHO05D003481 1.0e-31 141.7 209 40.2
AT4G04790 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 1.8e-31 141.0 176 42.6
BcaC09g51192 Brassica carinata HOM05D003177 ORTHO05D003481 3.9e-31 139.8 209 40.2
C01p15880 Brassica napus HOM05D003177 ORTHO05D003481 3.9e-31 139.8 209 40.2
AL6G48280 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 5.1e-31 139.4 209 39.2
BcaNung02254 Brassica carinata HOM05D003177 ORTHO05D003481 8.7e-31 138.7 180 42.2
BraA01t01262Z Brassica rapa HOM05D003177 ORTHO05D003481 1.1e-30 138.3 211 38.4
Medtr4g081220 Medicago truncatula HOM05D003177 ORTHO05D003481 1.1e-30 138.3 199 39.7
A01p13180 Brassica napus HOM05D003177 ORTHO05D003481 2.5e-30 137.1 181 40.9
PSO478G2228 Papaver somniferum HOM05D003177 ORTHO05D003481 1.8e-28 131.0 149 43.0
AL7G32020 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 3.1e-28 130.2 208 37.5
Sp7g20030 Schrenkiella parvula HOM05D003177 ORTHO05D003481 5.3e-28 129.4 185 37.8
Glyma.U031231 Glycine max HOM05D003177 ORTHO05D003481 1.2e-27 128.3 129 48.8
Phvul.011G140050 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 2.6e-27 127.1 175 40.0
Thhalv10024397m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 4.5e-27 126.3 185 38.4
Aa31LG9G9680 Aethionema arabicum HOM05D003177 ORTHO05D003481 1.0e-26 125.2 200 33.0
SEGI_03301 Sequoiadendron giganteum HOM05D003177 ORTHO05D003481 2.2e-26 124.0 175 35.4
AT4G21880 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 6.5e-26 122.5 187 39.0
Medtr4g081210 Medicago truncatula HOM05D003177 ORTHO05D003481 1.9e-25 120.9 163 41.1
Carub.0007s1949 Capsella rubella HOM05D003177 ORTHO05D003481 2.7e-24 117.1 208 35.6
CARHR228640 Cardamine hirsuta HOM05D003177 ORTHO05D003481 1.0e-23 115.2 197 36.5
FvH4_3g43180 Fragaria vesca HOM05D003177 ORTHO05D003481 6.9e-20 102.4 104 45.2
FAN21G1934 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.6e-19 100.5 104 45.2
CiPaw.11G183800 Carya illinoinensis HOM05D003177 ORTHO05D003481 3.4e-19 100.1 91 52.7
FvH4_3g43110 Fragaria vesca HOM05D003177 ORTHO05D003481 7.7e-19 99.0 102 45.1
Medtr7g007510 Medicago truncatula HOM05D003177 ORTHO05D003481 1.3e-18 98.2 180 35.0
Phvul.005G091800 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 1.9e-17 94.4 120 40.8
BcaC09g51195 Brassica carinata HOM05D003177 ORTHO05D003481 7.2e-17 92.4 107 40.2
FAN16G1316 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.1e-16 90.9 154 35.1
AL1G67350 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 4.8e-13 79.7 104 38.5
AL1G67370 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 5.3e-12 76.3 164 31.7
FAN11G0113 Fragaria x ananassa HOM05D003177 ORTHO05D003481 9.1e-12 75.5 94 41.5
unitig_749.g13972 Utricularia gibba HOM05D003177 ORTHO05D003481 9.1e-12 75.5 85 44.7
FvH4_3g42340 Fragaria vesca HOM05D003177 ORTHO05D003481 1.5e-11 74.7 94 41.5
FvH4_3g42560 Fragaria vesca HOM05D003177 ORTHO05D003481 5.9e-11 72.8 94 40.4
FvH4_3g41772 Fragaria vesca HOM05D003177 ORTHO05D003481 1.3e-10 71.6 101 37.6
CARHR228590 Cardamine hirsuta HOM05D003177 ORTHO05D003481 2.9e-10 70.5 85 36.5
FAN28G1104 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.9e-09 67.8 94 39.4
FAN11G2904 Fragaria x ananassa HOM05D003177 ORTHO05D003481 7.2e-09 65.9 94 38.3
unitig_26.g9968 Utricularia gibba HOM05D003177 ORTHO05D003481 1.6e-08 64.7 71 43.7
Medtr7g025580 Medicago truncatula HOM05D003177 ORTHO05D003481 2.3e-07 60.8 127 32.3
Medtr7g025530 Medicago truncatula HOM05D003177 ORTHO05D003481 3.0e-07 60.5 72 40.3
GSVIVG01014607001 Vitis vinifera HOM05D003177 ORTHO05D003481 9.7e-06 55.5 47 51.1


User provided reference genes

Program Settings