Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 5.2e-60 234.2 118 100.0
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 3.9e-23 111.7 107 62.6
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 2.1e-13 79.3 104 48.1
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 8.1e-13 77.4 107 45.8
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 2.4e-12 75.9 105 47.6
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 3.1e-12 75.5 122 42.6
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 4.0e-12 75.1 105 45.7
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 5.3e-12 74.7 105 45.7
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 1.2e-11 73.6 101 45.5
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 1.2e-11 73.6 105 43.8
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 1.5e-11 73.2 105 45.7
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 2.6e-11 72.4 105 44.8
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 2.6e-11 72.4 99 46.5
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 4.5e-11 71.6 99 45.5
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 5.8e-11 71.2 105 46.7
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 5.8e-11 71.2 105 44.8
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 5.8e-11 71.2 103 45.6
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 7.6e-11 70.9 105 45.7
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 9.9e-11 70.5 105 42.9
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 9.9e-11 70.5 97 46.4
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 9.9e-11 70.5 97 42.3
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 1.3e-10 70.1 103 43.7
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 1.3e-10 70.1 103 43.7
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 1.7e-10 69.7 99 43.4
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 1.7e-10 69.7 105 44.8
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 1.7e-10 69.7 105 45.7
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 2.2e-10 69.3 105 44.8
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 2.2e-10 69.3 105 40.0
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 2.9e-10 68.9 105 44.8
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 2.9e-10 68.9 105 44.8
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 2.9e-10 68.9 103 41.7
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.9e-10 68.9 103 41.7
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.9e-10 68.9 103 41.7
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 2.9e-10 68.9 105 43.8
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 2.9e-10 68.9 105 44.8
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 3.8e-10 68.6 105 41.0
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 3.8e-10 68.6 105 41.9
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.8e-10 68.6 105 43.8
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.8e-10 68.6 105 43.8
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 3.8e-10 68.6 105 43.8
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 4.9e-10 68.2 105 43.8
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 4.9e-10 68.2 105 41.0
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 6.4e-10 67.8 105 41.0
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 6.4e-10 67.8 105 43.8
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 6.4e-10 67.8 105 43.8
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 6.4e-10 67.8 105 42.9
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 6.4e-10 67.8 99 45.5
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 6.4e-10 67.8 105 43.8
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 6.4e-10 67.8 103 41.7
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 8.4e-10 67.4 105 43.8
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 8.4e-10 67.4 105 41.0
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 8.4e-10 67.4 105 39.0
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 8.4e-10 67.4 105 41.0
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 8.4e-10 67.4 141 36.9
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 8.4e-10 67.4 120 38.3
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 1.1e-09 67.0 97 43.3
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 1.4e-09 66.6 105 41.0
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.4e-09 66.6 103 42.7
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 1.4e-09 66.6 103 40.8
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 1.9e-09 66.2 105 42.9
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 1.9e-09 66.2 105 40.0
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 2.4e-09 65.9 105 41.9
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 2.4e-09 65.9 105 41.0
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 2.4e-09 65.9 105 40.0
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 2.4e-09 65.9 105 40.0
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 2.4e-09 65.9 105 40.0
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 3.2e-09 65.5 105 41.0
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 3.2e-09 65.5 105 40.0
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 3.2e-09 65.5 105 41.9
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 3.2e-09 65.5 99 44.4
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 3.2e-09 65.5 105 41.9
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 4.2e-09 65.1 106 41.5
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 4.2e-09 65.1 105 40.0
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 4.2e-09 65.1 105 40.0
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 4.2e-09 65.1 105 40.0
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 4.2e-09 65.1 105 41.0
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 5.5e-09 64.7 105 41.0
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 9.3e-09 63.9 105 40.0
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.2e-08 63.5 38 78.9
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 1.2e-08 63.5 105 40.0
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 1.2e-08 63.5 95 42.1
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 1.2e-08 63.5 108 41.7
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 1.2e-08 63.5 99 42.4
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 1.2e-08 63.5 103 39.8
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 1.6e-08 63.2 95 45.3
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.6e-08 63.2 48 66.7
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.1e-08 62.8 38 76.3
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.7e-08 62.4 38 78.9
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 2.7e-08 62.4 106 40.6
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 2.7e-08 62.4 110 39.1
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 3.5e-08 62.0 95 42.1
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 4.6e-08 61.6 38 73.7
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 4.6e-08 61.6 38 76.3
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 4.6e-08 61.6 38 76.3
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 6.0e-08 61.2 105 38.1
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 6.0e-08 61.2 38 73.7
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 6.0e-08 61.2 38 76.3
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 6.0e-08 61.2 107 36.4
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 1.0e-07 60.5 105 40.0
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 1.0e-07 60.5 105 38.1
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 1.0e-07 60.5 105 40.0
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 1.0e-07 60.5 105 40.0
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.3e-07 60.1 38 71.1
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 1.3e-07 60.1 38 73.7
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 1.3e-07 60.1 101 39.6
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 1.8e-07 59.7 105 39.0
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 1.8e-07 59.7 103 38.8
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 2.3e-07 59.3 38 76.3
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 3.0e-07 58.9 99 39.4
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 5.1e-07 58.2 38 71.1
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 1.1e-06 57.0 38 73.7
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 1.9e-06 56.2 38 73.7
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 1.9e-06 56.2 38 71.1
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 4.3e-06 55.1 97 40.2
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 5.6e-06 54.7 105 38.1
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 7.4e-06 54.3 33 78.8
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 7.4e-06 54.3 103 33.0


User provided reference genes

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