Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0671 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 1.7e-221 772.3 383 100.0
CDE10G0952 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 6.8e-202 707.2 362 95.3
Aqoxy1G00525 Aquilegia oxysepala HOM05D003687 ORTHO05D004571 4.4e-177 624.8 357 82.4
MSTRG.3621 Avicennia marina HOM05D003687 ORTHO05D004571 9.9e-177 623.6 356 84.0
CSS0042676 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 1.3e-176 623.2 361 81.7
THA.LOC104807434 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 2.2e-176 622.5 357 82.1
MBI05_g40602_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 4.9e-176 621.3 357 82.4
BcaB07g31719 Brassica carinata HOM05D003687 ORTHO05D004571 1.4e-175 619.8 355 81.7
Oeu028610.1 Olea europaea HOM05D003687 ORTHO05D004571 1.9e-175 619.4 359 82.2
PSO339G2900 Papaver somniferum HOM05D003687 ORTHO05D004571 1.9e-175 619.4 352 82.7
Lsat_1_v5_gn_8_23040 Lactuca sativa HOM05D003687 ORTHO05D004571 2.4e-175 619.0 357 81.0
PSO063G5755 Papaver somniferum HOM05D003687 ORTHO05D004571 2.4e-175 619.0 357 81.5
Thhalv10025259m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 3.2e-175 618.6 357 81.0
Sp3g30960 Schrenkiella parvula HOM05D003687 ORTHO05D004571 3.2e-175 618.6 352 82.7
C09p13480 Brassica napus HOM05D003687 ORTHO05D004571 7.1e-175 617.5 361 80.1
PGR119G1501 Punica granatum HOM05D003687 ORTHO05D004571 7.1e-175 617.5 357 82.4
Carub.0003s3171 Capsella rubella HOM05D003687 ORTHO05D004571 1.2e-174 616.7 357 81.5
Nitab4.5_0000702g0080 Nicotiana tabacum HOM05D003687 ORTHO05D004571 1.2e-174 616.7 361 81.2
Cc07_g11670 Coffea canephora HOM05D003687 ORTHO05D004571 1.6e-174 616.3 355 83.1
Lj4P233T12 Lonicera japonica HOM05D003687 ORTHO05D004571 2.1e-174 615.9 360 79.7
BolC9t54238H Brassica oleracea HOM05D003687 ORTHO05D004571 2.7e-174 615.5 361 79.8
Thhalv10023021m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 2.7e-174 615.5 357 81.0
Thecc.01G007000 Theobroma cacao HOM05D003687 ORTHO05D004571 2.7e-174 615.5 357 80.7
TAR628G0600 Trochodendron aralioides HOM05D003687 ORTHO05D004571 4.6e-174 614.8 362 79.8
BraA09t36786Z Brassica rapa HOM05D003687 ORTHO05D004571 7.8e-174 614.0 361 79.5
Carub.0007s0467 Capsella rubella HOM05D003687 ORTHO05D004571 7.8e-174 614.0 357 80.4
Lalb_Chr05g0211911 Lupinus albus HOM05D003687 ORTHO05D004571 7.8e-174 614.0 359 80.8
AL7G15520 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 1.0e-173 613.6 357 80.1
FAN28G1596 Fragaria x ananassa HOM05D003687 ORTHO05D004571 1.3e-173 613.2 361 82.5
FAN23G1902 Fragaria x ananassa HOM05D003687 ORTHO05D004571 1.7e-173 612.8 357 82.9
AL3G50590 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 2.3e-173 612.5 357 81.0
AT2G17630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 2.3e-173 612.5 357 80.7
Lalb_Chr16g0377261 Lupinus albus HOM05D003687 ORTHO05D004571 2.3e-173 612.5 359 81.1
Manes.01G153800 Manihot esculenta HOM05D003687 ORTHO05D004571 2.3e-173 612.5 357 82.6
Rhsim10G0197900 Rhododendron simsii HOM05D003687 ORTHO05D004571 2.3e-173 612.5 361 80.3
Ca_19449_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 3.0e-173 612.1 363 80.2
Sopen02g027630 Solanum pennellii HOM05D003687 ORTHO05D004571 3.0e-173 612.1 359 81.6
Cpa.g.sc535.4 Carica papaya HOM05D003687 ORTHO05D004571 3.9e-173 611.7 355 81.7
PGSC0003DMG400001524 Solanum tuberosum HOM05D003687 ORTHO05D004571 5.1e-173 611.3 359 81.6
A09p11460 Brassica napus HOM05D003687 ORTHO05D004571 6.6e-173 610.9 361 78.9
Sp7g33400 Schrenkiella parvula HOM05D003687 ORTHO05D004571 6.6e-173 610.9 357 80.4
Solyc02g082830.3 Solanum lycopersicum HOM05D003687 ORTHO05D004571 8.7e-173 610.5 359 81.3
FvH4_1g10530 Fragaria vesca HOM05D003687 ORTHO05D004571 1.1e-172 610.1 361 81.7
FAN26G2468 Fragaria x ananassa HOM05D003687 ORTHO05D004571 1.1e-172 610.1 361 82.3
CANSAT25G3704 Cannabis sativa HOM05D003687 ORTHO05D004571 1.5e-172 609.8 361 81.2
TPR.G18309 Trifolium pratense HOM05D003687 ORTHO05D004571 1.5e-172 609.8 355 80.8
ATR0329G002 Amborella trichopoda HOM05D003687 ORTHO05D004571 2.5e-172 609.0 358 80.4
ClCG10G000330 Citrullus lanatus HOM05D003687 ORTHO05D004571 2.5e-172 609.0 359 80.2
FAN19G1222 Fragaria x ananassa HOM05D003687 ORTHO05D004571 2.5e-172 609.0 361 81.4
Medtr8g074010 Medicago truncatula HOM05D003687 ORTHO05D004571 2.5e-172 609.0 358 81.0
SalBow3G3833 Salvia bowleyana HOM05D003687 ORTHO05D004571 2.5e-172 609.0 355 80.8
Duzib147G1246 Durio zibethinus HOM05D003687 ORTHO05D004571 3.3e-172 608.6 357 79.8
Migut.H02194 Erythranthe guttata HOM05D003687 ORTHO05D004571 3.3e-172 608.6 350 81.7
RcHm_v2.0_Chr2g0097441 Rosa chinensis HOM05D003687 ORTHO05D004571 3.3e-172 608.6 357 81.8
THA.LOC104819724 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 3.3e-172 608.6 357 80.4
Hma1.2p1_0300F.1_g118150 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 4.3e-172 608.2 355 82.3
A08p21800 Brassica napus HOM05D003687 ORTHO05D004571 5.6e-172 607.8 357 79.0
Psat0s1725g0080 Pisum sativum HOM05D003687 ORTHO05D004571 7.3e-172 607.4 364 79.4
SEGI_09550 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 7.3e-172 607.4 356 80.9
TAR376G1076 Trochodendron aralioides HOM05D003687 ORTHO05D004571 9.6e-172 607.1 357 80.1
AT4G35630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 1.3e-171 606.7 357 80.1
BraA08t34133Z Brassica rapa HOM05D003687 ORTHO05D004571 1.6e-171 606.3 357 79.3
MD02G1119200 Malus domestica HOM05D003687 ORTHO05D004571 1.6e-171 606.3 361 80.9
SGA_v2.0_scaffold2G00959 Striga asiatica HOM05D003687 ORTHO05D004571 1.6e-171 606.3 361 79.5
BolC3t20334H Brassica oleracea HOM05D003687 ORTHO05D004571 2.1e-171 605.9 357 79.3
MD15G1233200 Malus domestica HOM05D003687 ORTHO05D004571 2.1e-171 605.9 361 80.6
Manes.02G112800 Manihot esculenta HOM05D003687 ORTHO05D004571 2.1e-171 605.9 357 81.0
QL06p053788 Quercus lobata HOM05D003687 ORTHO05D004571 2.8e-171 605.5 362 81.2
Aa31LG8G14900 Aethionema arabicum HOM05D003687 ORTHO05D004571 3.6e-171 605.1 355 79.7
MELO3C013732.2 Cucumis melo HOM05D003687 ORTHO05D004571 3.6e-171 605.1 355 80.3
Hma1.2p1_2491F.1_g323220 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 3.6e-171 605.1 354 81.1
Lj2g0026838 Lotus japonicus HOM05D003687 ORTHO05D004571 3.6e-171 605.1 355 80.6
Lalb_Chr09g0321291 Lupinus albus HOM05D003687 ORTHO05D004571 3.6e-171 605.1 354 80.8
TPR.G25131 Trifolium pratense HOM05D003687 ORTHO05D004571 6.2e-171 604.4 357 80.4
unitig_699.g19680 Utricularia gibba HOM05D003687 ORTHO05D004571 8.1e-171 604.0 361 79.2
BcaC01g00508 Brassica carinata HOM05D003687 ORTHO05D004571 1.1e-170 603.6 357 78.7
C03p80790 Brassica napus HOM05D003687 ORTHO05D004571 1.1e-170 603.6 357 78.7
Cfa007065 Carpinus fangiana HOM05D003687 ORTHO05D004571 1.1e-170 603.6 361 79.8
CsaV3_3G000370 Cucumis sativus L. HOM05D003687 ORTHO05D004571 1.1e-170 603.6 355 80.3
QL06p052789 Quercus lobata HOM05D003687 ORTHO05D004571 1.1e-170 603.6 362 80.9
CARHR243980 Cardamine hirsuta HOM05D003687 ORTHO05D004571 1.4e-170 603.2 357 79.6
Eucgr.I02231 Eucalyptus grandis HOM05D003687 ORTHO05D004571 1.4e-170 603.2 357 80.1
Prupe.7G180700 Prunus persica HOM05D003687 ORTHO05D004571 1.4e-170 603.2 352 81.2
CiPaw.07G004000 Carya illinoinensis HOM05D003687 ORTHO05D004571 1.8e-170 602.8 363 79.9
Gorai.001G198400 Gossypium raimondii HOM05D003687 ORTHO05D004571 1.8e-170 602.8 357 79.3
Gohir.D07G177500 Gossypium hirsutum HOM05D003687 ORTHO05D004571 3.1e-170 602.1 357 79.3
COL.COLO4_22538 Corchorus olitorius HOM05D003687 ORTHO05D004571 4.0e-170 601.7 357 78.7
Gohir.A07G170700 Gossypium hirsutum HOM05D003687 ORTHO05D004571 4.0e-170 601.7 357 79.3
Psat2g150440 Pisum sativum HOM05D003687 ORTHO05D004571 5.3e-170 601.3 360 80.0
CiPaw.08G180600 Carya illinoinensis HOM05D003687 ORTHO05D004571 9.0e-170 600.5 363 79.3
Sed0005072 Sechium edule HOM05D003687 ORTHO05D004571 1.2e-169 600.1 350 81.1
Duzib264G0784 Durio zibethinus HOM05D003687 ORTHO05D004571 2.0e-169 599.4 357 78.4
BcaB03g12420 Brassica carinata HOM05D003687 ORTHO05D004571 2.6e-169 599.0 357 78.4
Potri.005G099900 Populus trichocarpa HOM05D003687 ORTHO05D004571 2.6e-169 599.0 357 80.1
SGA_v2.0_scaffold108G30984 Striga asiatica HOM05D003687 ORTHO05D004571 2.6e-169 599.0 355 79.4
arahy.Tifrunner.gnm1.ann1.XW297T Arachis hypogaea HOM05D003687 ORTHO05D004571 3.4e-169 598.6 354 81.1
arahy.Tifrunner.gnm1.ann1.ZVTH8F Arachis hypogaea HOM05D003687 ORTHO05D004571 3.4e-169 598.6 354 81.1
Sabra05G0082600 Salix brachista HOM05D003687 ORTHO05D004571 3.4e-169 598.6 357 80.1
VMungo1215G1127 Vigna mungo HOM05D003687 ORTHO05D004571 3.4e-169 598.6 357 79.3
TWI53G1012 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 4.4e-169 598.2 360 78.6
Phvul.002G115000 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 7.6e-169 597.4 357 79.8
TWI09G0502 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 1.7e-168 596.3 358 79.3
Glyma.02G041900 Glycine max HOM05D003687 ORTHO05D004571 3.8e-168 595.1 357 77.3
Atru.chr3.957 Acer truncatum HOM05D003687 ORTHO05D004571 2.4e-167 592.4 355 78.6
Atru.chr3.969 Acer truncatum HOM05D003687 ORTHO05D004571 2.4e-167 592.4 355 78.6
DCAR_030822 Daucus carota HOM05D003687 ORTHO05D004571 2.4e-167 592.4 355 80.0
vmacro20525 Vaccinium macrocarpon HOM05D003687 ORTHO05D004571 1.6e-166 589.7 333 83.8
Glyma.01G159800 Glycine max HOM05D003687 ORTHO05D004571 6.0e-166 587.8 358 78.5
Glyma.11G084400 Glycine max HOM05D003687 ORTHO05D004571 6.6e-165 584.3 358 78.5
Ciclev10025659m.g Citrus clementina HOM05D003687 ORTHO05D004571 8.7e-165 583.9 358 77.4
Phvul.003G269100 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 1.3e-163 580.1 355 76.3
Ah.03g148400 Amaranthus hybridus HOM05D003687 ORTHO05D004571 3.6e-163 578.6 360 77.8
Aa31LG6G12590 Aethionema arabicum HOM05D003687 ORTHO05D004571 4.0e-162 575.1 356 76.7
SHI29483 Sapria himalayana HOM05D003687 ORTHO05D004571 5.8e-161 571.2 353 77.3
Sc07g0001320 Simmondsia chinensis HOM05D003687 ORTHO05D004571 7.6e-161 570.9 356 76.1
HPP92_002248 Vanilla planifolia HOM05D003687 ORTHO05D004571 7.6e-161 570.9 354 76.3
Pp3c9_15390 Physcomitrium patens HOM05D003687 ORTHO05D004571 2.9e-160 568.9 369 73.7
VMungo0251G3174 Vigna mungo HOM05D003687 ORTHO05D004571 1.1e-159 567.0 352 74.4
EL10Ac6g15469 Beta vulgaris HOM05D003687 ORTHO05D004571 5.4e-159 564.7 355 77.2
SMO259G0019 Selaginella moellendorffii HOM05D003687 ORTHO05D004571 3.5e-158 562.0 356 75.8
Peaxi162Scf01446g00005 Petunia axillaris HOM05D003687 ORTHO05D004571 4.6e-158 561.6 319 83.4
BcaC04g22959 Brassica carinata HOM05D003687 ORTHO05D004571 1.0e-157 560.5 324 80.6
Mapoly0033s0118 Marchantia polymorpha HOM05D003687 ORTHO05D004571 5.1e-157 558.1 369 72.4
CAN.G890.77 Capsicum annuum HOM05D003687 ORTHO05D004571 8.7e-157 557.4 324 81.5
CBR_g54970 Chara braunii HOM05D003687 ORTHO05D004571 6.9e-154 547.7 374 71.1
Ca_24964_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 6.9e-154 547.7 326 80.4
CBR_g34176 Chara braunii HOM05D003687 ORTHO05D004571 1.2e-153 547.0 374 70.9
Actinidia17383 Actinidia chinensis HOM05D003687 ORTHO05D004571 2.7e-150 535.8 361 72.9
Os03g0157900 Oryza sativa ssp. japonica HOM05D003687 ORTHO05D004571 3.9e-149 531.9 363 70.8
AUR62029452 Chenopodium quinoa HOM05D003687 ORTHO05D004571 1.6e-147 526.6 326 77.6
Zm00001eb004390 Zea mays HOM05D003687 ORTHO05D004571 2.1e-147 526.2 363 70.2
Haze_03674 Corylus avellana HOM05D003687 ORTHO05D004571 2.0e-129 466.5 361 67.0
FAN26G0112 Fragaria x ananassa HOM05D003687 ORTHO05D004571 6.5e-128 461.5 312 74.0
Cre07.g331550 Chlamydomonas reinhardtii HOM05D003687 ORTHO05D004571 8.5e-128 461.1 356 62.4
PRCOL_00000472 Prasinoderma coloniale HOM05D003687 ORTHO05D004571 3.6e-126 455.7 359 61.0
ECA233G3718 Erigeron canadensis HOM05D003687 ORTHO05D004571 8.8e-117 424.5 355 62.0
MCO11G731 Micromonas commoda HOM05D003687 ORTHO05D004571 8.8e-117 424.5 351 58.1
GSVIVG01006497001 Vitis vinifera HOM05D003687 ORTHO05D004571 1.1e-111 407.5 355 60.0
Nitab4.5_0002967g0020 Nicotiana tabacum HOM05D003687 ORTHO05D004571 2.7e-110 402.9 361 60.1
MBI05_g22625_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 7.3e-95 351.7 357 54.9
Haze_26462 Corylus avellana HOM05D003687 ORTHO05D004571 1.0e-88 331.3 355 48.7
QL06p052765 Quercus lobata HOM05D000009 ORTHO05D000008 3.2e-82 309.7 265 63.4
QL06p053814 Quercus lobata HOM05D003687 ORTHO05D004571 2.5e-79 300.1 253 65.2
HanXRQChr09g0253801 Helianthus annuus HOM05D003687 ORTHO05D004571 5.6e-79 298.9 187 73.3
HanXRQChr02g0050301 Helianthus annuus HOM05D003687 ORTHO05D004571 2.8e-78 296.6 176 76.1
BcaB07g31718 Brassica carinata HOM05D003687 ORTHO05D004571 1.9e-71 273.9 172 77.9
A06p33750 Brassica napus HOM05D003687 ORTHO05D004571 1.7e-67 260.8 221 60.6
QL06p052757 Quercus lobata HOM05D003687 ORTHO05D004571 2.9e-67 260.0 255 58.4
Dinv40174 Davidia involucrata HOM05D003687 ORTHO05D004571 6.0e-65 252.3 142 86.6
SalBow2G1655 Salvia bowleyana HOM05D003687 ORTHO05D004571 7.3e-63 245.4 250 54.0
MCO03G424 Micromonas commoda HOM05D003687 ORTHO05D049027 1.9e-55 220.7 356 35.4
Cfa023378 Carpinus fangiana HOM05D003687 ORTHO05D004571 2.8e-54 216.9 421 34.0
CSS0005640 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 3.8e-51 206.5 183 60.7
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 5.4e-50 202.6 172 63.4
PRCOL_00006694 Prasinoderma coloniale HOM05D003687 ORTHO05D049027 7.1e-50 202.2 315 37.1
ATR0553G001 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.5e-47 194.5 183 59.6
QL06p053818 Quercus lobata HOM05D003687 ORTHO05D004571 5.6e-47 192.6 162 64.8
Dinv17413 Davidia involucrata HOM05D003687 ORTHO05D004571 9.6e-47 191.8 157 65.0
Dinv09926 Davidia involucrata HOM05D003687 ORTHO05D004571 3.6e-46 189.9 157 64.3
Dinv37828 Davidia involucrata HOM05D003687 ORTHO05D004571 9.0e-45 185.3 157 63.7
RcHm_v2.0_Chr2g0097551 Rosa chinensis HOM05D003687 ORTHO05D004571 1.2e-44 184.9 150 60.7
Dinv29031 Davidia involucrata HOM05D003687 ORTHO05D034002 3.8e-43 179.9 152 63.8
SalBow8G1645 Salvia bowleyana HOM05D003687 ORTHO05D004571 4.9e-43 179.5 108 76.9
SalBow7G3504 Salvia bowleyana HOM05D003687 ORTHO05D004571 1.6e-41 174.5 270 40.7
BcaB07g31714 Brassica carinata HOM05D003687 ORTHO05D004571 1.3e-40 171.4 147 63.9
ATR0763G123 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.8e-32 144.4 93 74.2
Dinv34003 Davidia involucrata HOM05D003687 ORTHO05D004571 2.4e-29 134.0 83 78.3
SalBow6G6204 Salvia bowleyana HOM05D003687 ORTHO05D004571 1.5e-28 131.3 78 76.9
SEGI_08881 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 2.0e-28 131.0 295 31.5
ATR0749G088 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.3e-27 128.3 93 65.6
RcHm_v2.0_Chr2g0097541 Rosa chinensis HOM05D003687 ORTHO05D004571 6.5e-27 125.9 73 82.2
SalBow7G4144 Salvia bowleyana HOM05D003687 ORTHO05D004571 1.4e-21 108.2 227 34.4
SalBow6G6332 Salvia bowleyana HOM05D003687 ORTHO05D004571 2.0e-20 104.4 135 45.2
Dinv18127 Davidia involucrata HOM05D003687 ORTHO05D043272 1.1e-15 88.6 59 79.7
SalBow6G4873 Salvia bowleyana HOM05D003687 ORTHO05D004571 1.1e-15 88.6 62 61.3
BraA06t26310Z Brassica rapa HOM05D003687 ORTHO05D043272 5.7e-15 86.3 61 82.0
ATR0329G021 Amborella trichopoda HOM05D003687 ORTHO05D004571 2.4e-13 80.9 55 74.5
ATR0199G031 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.5e-12 78.2 60 65.0
ATR0208G001 Amborella trichopoda HOM05D003687 ORTHO05D067511 3.4e-12 77.0 59 67.8
Psat6g182000 Pisum sativum HOM05D002062 ORTHO05D002242 1.4e-10 71.6 50 70.0
Psat3g043760 Pisum sativum HOM05D003687 ORTHO05D018418 1.0e-08 65.5 37 83.8
SalBow6G6873 Salvia bowleyana HOM05D000052 ORTHO05D000046 2.3e-08 64.3 108 35.2
TAR371G0743 Trochodendron aralioides HOM05D003687 ORTHO05D006936 8.8e-08 62.4 61 54.1
Solyc04g050430.1 Solanum lycopersicum HOM05D001565 ORTHO05D004571 2.0e-07 61.2 50 62.0
Solyc04g150135.1 Solanum lycopersicum HOM05D001565 ORTHO05D001725 2.6e-07 60.8 49 61.2
Sopen04g021110 Solanum pennellii HOM05D001565 ORTHO05D018129 2.6e-07 60.8 40 72.5
Solyc04g050403.1 Solanum lycopersicum HOM05D001565 ORTHO05D004571 4.8e-06 56.6 40 72.5


User provided reference genes

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