Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 2.8e-238 828.2 412 100.0
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 7.8e-196 687.2 382 89.8
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 2.5e-149 532.7 400 67.8
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 2.5e-149 532.7 388 67.5
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 7.2e-149 531.2 356 72.2
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 7.2e-149 531.2 414 65.7
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 2.1e-148 529.6 298 81.9
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 2.1e-148 529.6 308 79.5
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 7.9e-148 527.7 390 66.9
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 3.0e-147 525.8 349 73.4
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 6.7e-147 524.6 346 74.0
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 1.1e-146 523.9 398 66.6
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 1.1e-146 523.9 389 67.6
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 3.3e-146 522.3 307 79.8
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 1.7e-145 520.0 287 82.9
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 1.7e-145 520.0 306 79.7
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 1.7e-145 520.0 304 79.6
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.7e-145 520.0 305 79.3
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 2.2e-145 519.6 308 78.2
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 3.7e-145 518.8 304 79.6
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 3.7e-145 518.8 405 64.2
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 6.3e-145 518.1 333 74.5
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 6.3e-145 518.1 363 70.2
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.4e-144 516.9 414 63.3
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 2.4e-144 516.2 361 70.9
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 4.1e-144 515.4 393 66.2
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 5.3e-144 515.0 351 71.5
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 5.3e-144 515.0 300 79.7
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 7.0e-144 514.6 349 71.3
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 9.1e-144 514.2 349 71.3
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 1.2e-143 513.8 351 70.9
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.5e-143 513.5 305 79.0
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 4.5e-143 511.9 350 70.9
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 5.9e-143 511.5 343 72.3
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 1.0e-142 510.8 347 73.5
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 1.3e-142 510.4 300 78.7
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 3.8e-142 508.8 348 69.8
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 3.8e-142 508.8 280 82.9
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 3.8e-142 508.8 310 75.8
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 3.8e-142 508.8 361 68.4
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 5.0e-142 508.4 413 61.5
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 6.5e-142 508.1 290 81.0
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 8.5e-142 507.7 350 70.9
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.1e-141 507.3 319 75.2
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 1.5e-141 506.9 299 78.3
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.5e-141 506.9 300 79.0
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 1.9e-141 506.5 332 73.8
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 1.9e-141 506.5 288 80.9
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 1.9e-141 506.5 296 77.4
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.9e-141 506.5 354 70.6
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 2.5e-141 506.1 349 71.3
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 3.2e-141 505.8 305 77.4
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 5.5e-141 505.0 286 81.1
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 5.5e-141 505.0 348 69.5
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 7.2e-141 504.6 332 74.1
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 9.4e-141 504.2 341 69.5
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 9.4e-141 504.2 303 77.2
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.2e-140 503.8 286 81.1
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.2e-140 503.8 286 81.1
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 1.2e-140 503.8 348 71.3
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 1.2e-140 503.8 334 73.1
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 1.6e-140 503.4 348 72.7
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 2.1e-140 503.1 286 80.8
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 6.1e-140 501.5 300 77.7
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 1.0e-139 500.7 296 78.0
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 1.4e-139 500.4 341 71.6
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 1.8e-139 500.0 303 76.6
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 5.2e-139 498.4 304 78.6
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 5.2e-139 498.4 285 80.0
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 8.8e-139 497.7 303 75.6
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 1.1e-138 497.3 286 79.7
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 1.5e-138 496.9 329 71.4
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 5.7e-138 495.0 330 71.5
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 5.7e-138 495.0 340 70.9
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 7.5e-138 494.6 299 76.6
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 7.5e-138 494.6 410 63.7
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 9.7e-138 494.2 296 77.0
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 1.7e-137 493.4 355 67.9
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 2.2e-137 493.0 307 75.6
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 2.8e-137 492.7 294 76.2
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 3.7e-137 492.3 299 76.3
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 4.8e-137 491.9 305 74.4
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 1.4e-136 490.3 287 78.0
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 1.4e-136 490.3 312 74.0
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 2.4e-136 489.6 287 77.7
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 2.4e-136 489.6 330 70.9
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 3.1e-136 489.2 294 76.2
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 3.1e-136 489.2 347 69.5
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 5.3e-136 488.4 400 63.8
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 2.0e-135 486.5 321 71.3
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 3.5e-135 485.7 288 77.8
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 3.5e-135 485.7 288 77.8
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 3.5e-135 485.7 376 64.9
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 4.5e-135 485.3 287 77.7
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 1.0e-134 484.2 287 77.4
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 6.5e-134 481.5 335 67.5
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 1.9e-133 479.9 376 63.0
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 1.0e-131 474.2 360 66.9
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 1.0e-131 474.2 301 72.4
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 2.3e-131 473.0 300 74.0
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 2.0e-130 469.9 391 60.9
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 2.6e-130 469.5 266 80.1
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 4.4e-130 468.8 390 60.3
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 3.1e-128 462.6 281 75.8
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 4.5e-127 458.8 359 64.6
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 2.9e-126 456.1 357 63.6
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 5.0e-126 455.3 265 79.2
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 1.1e-125 454.1 257 81.7
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 2.5e-125 453.0 397 57.9
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 6.3e-121 438.3 408 57.4
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 1.8e-120 436.8 339 65.2
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 8.0e-116 421.4 361 60.7
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 1.8e-115 420.2 277 70.0
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 8.3e-113 411.4 313 61.7
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 4.1e-112 409.1 268 70.1
Sabra03G0079600 Salix brachista HOM05D005292 ORTHO05D006473 1.1e-109 401.0 219 84.5
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 7.3e-109 398.3 273 66.3
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 6.8e-107 391.7 352 56.2
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 2.4e-104 383.3 221 79.6
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 1.7e-102 377.1 236 73.3
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 5.8e-98 362.1 349 55.6
TAR629G1108 Trochodendron aralioides HOM05D005292 ORTHO05D006473 7.1e-96 355.1 183 86.9
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 3.0e-86 323.2 403 48.6
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 9.6e-85 318.2 350 50.3
Aa31LG11G5120 Aethionema arabicum HOM05D005292 ORTHO05D006473 4.2e-72 276.2 147 82.3
MD06G1074900 Malus domestica HOM05D005292 ORTHO05D006473 1.1e-67 261.5 147 78.2
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 3.2e-64 250.0 146 78.1
Lsat_1_v5_gn_8_156781 Lactuca sativa HOM05D005292 ORTHO05D006473 7.4e-45 185.7 173 57.2
Lsat_1_v5_gn_8_88300 Lactuca sativa HOM05D005292 ORTHO05D006473 3.8e-41 173.3 216 45.4
Lsat_1_v5_gn_2_99060 Lactuca sativa HOM05D005292 ORTHO05D006473 1.9e-40 171.0 120 72.5
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 2.3e-38 164.1 122 72.1
SEGI_25328 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 2.8e-36 157.1 93 67.7
Lsat_1_v5_gn_8_99640 Lactuca sativa HOM05D005292 ORTHO05D006473 3.2e-32 143.7 161 47.8
CDE11G1060 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 6.1e-31 139.4 66 93.9
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.3e-28 131.7 84 76.2
Cc08_g13200 Coffea canephora HOM05D005292 ORTHO05D006473 1.2e-26 125.2 66 81.8
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 2.6e-26 124.0 137 51.1
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 2.1e-23 114.4 137 48.9
MD06G1074800 Malus domestica HOM05D005292 ORTHO05D006473 4.7e-23 113.2 72 75.0
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 8.0e-23 112.5 66 80.3
TWI81G0363 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 1.2e-21 108.6 71 74.6
Eucgr.C02046 Eucalyptus grandis HOM05D005292 ORTHO05D006473 1.4e-14 85.1 48 72.9
vmacro17465 Vaccinium macrocarpon HOM05D002883 ORTHO05D003116 2.0e-13 81.3 42 81.0
Peaxi162Scf00102g01237 Petunia axillaris HOM05D000023 ORTHO05D013611 4.2e-08 63.5 46 60.9


User provided reference genes

Program Settings