Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1571 Ceratophyllum demersum HOM05D005760 ORTHO05D007113 0.0e+00 1518.8 761 100.0
TAR628G1581 Trochodendron aralioides HOM05D005760 ORTHO05D007113 2.9e-188 662.9 912 45.5
Haze_22520 Corylus avellana HOM05D005760 ORTHO05D007113 2.0e-173 613.6 855 45.5
Atru.chr13.1758 Acer truncatum HOM05D005760 ORTHO05D007113 3.5e-173 612.8 863 45.9
Cfa013846 Carpinus fangiana HOM05D005760 ORTHO05D007113 2.9e-172 609.8 869 45.1
Nn1g08372 Nelumbo nucifera HOM05D005760 ORTHO05D007113 8.5e-172 608.2 904 43.7
ATR0003G012 Amborella trichopoda HOM05D005760 ORTHO05D007113 1.9e-171 607.1 859 45.1
COL.COLO4_04233 Corchorus olitorius HOM05D005760 ORTHO05D007113 8.8e-169 598.2 899 43.7
Ciclev10000028m.g Citrus clementina HOM05D005760 ORTHO05D007113 1.2e-168 597.8 880 44.2
Aqoxy6G00127 Aquilegia oxysepala HOM05D005760 ORTHO05D007113 2.0e-168 597.0 841 44.8
CANSAT78G0610 Cannabis sativa HOM05D005760 ORTHO05D007113 5.7e-168 595.5 857 43.5
Dinv41715 Davidia involucrata HOM05D005760 ORTHO05D007113 6.3e-167 592.0 903 42.6
Actinidia23335 Actinidia chinensis HOM05D005760 ORTHO05D007113 2.4e-166 590.1 895 43.2
PSO170G3854 Papaver somniferum HOM05D005760 ORTHO05D007113 3.1e-166 589.7 893 42.3
Prupe.8G057200 Prunus persica HOM05D005760 ORTHO05D007113 7.0e-166 588.6 856 44.5
CSS0014231 Camellia sinensis var. sinensis HOM05D005760 ORTHO05D007113 2.0e-165 587.0 889 43.0
Thecc.08G184000 Theobroma cacao HOM05D005760 ORTHO05D007113 1.0e-164 584.7 827 45.1
QL02p033685 Quercus lobata HOM05D005760 ORTHO05D007113 2.9e-164 583.2 846 45.0
PSO782G3241 Papaver somniferum HOM05D005760 ORTHO05D007113 1.2e-162 577.8 861 42.5
Os01g0873800 Oryza sativa ssp. japonica HOM05D005760 ORTHO05D007113 2.1e-162 577.0 865 43.0
Gohir.D05G253200 Gossypium hirsutum HOM05D005760 ORTHO05D007113 4.7e-162 575.9 870 43.8
Gorai.009G263800 Gossypium raimondii HOM05D005760 ORTHO05D007113 1.2e-160 571.2 870 43.4
Rhsim06G0094000 Rhododendron simsii HOM05D005760 ORTHO05D007113 1.3e-159 567.8 854 43.8
Lj5g0008525 Lotus japonicus HOM05D005760 ORTHO05D007113 2.4e-158 563.5 880 43.0
Manes.18G101200 Manihot esculenta HOM05D005760 ORTHO05D007113 4.1e-158 562.8 907 42.6
Lj4C503G3 Lonicera japonica HOM05D005760 ORTHO05D007113 1.2e-157 561.2 871 42.1
Glyma.02G158100 Glycine max HOM05D005760 ORTHO05D007113 3.5e-157 559.7 872 42.4
Phvul.007G245600 Phaseolus vulgaris HOM05D005760 ORTHO05D007113 3.5e-157 559.7 859 43.1
Sabra19G0094600 Salix brachista HOM05D005760 ORTHO05D007113 2.9e-156 556.6 863 42.6
PGR102G0553 Punica granatum HOM05D005760 ORTHO05D007113 6.6e-156 555.4 855 42.2
MD10G1047900 Malus domestica HOM05D005760 ORTHO05D007113 1.5e-155 554.3 910 41.4
CsaV3_2G033490 Cucumis sativus L. HOM05D005760 ORTHO05D007113 4.3e-155 552.7 867 42.7
THA.LOC104806788 Tarenaya hassleriana HOM05D005760 ORTHO05D007113 9.5e-155 551.6 889 41.5
vmacro12489 Vaccinium macrocarpon HOM05D005760 ORTHO05D007113 2.1e-154 550.4 854 43.7
MD05G1041500 Malus domestica HOM05D005760 ORTHO05D007113 2.8e-154 550.1 849 43.0
Ca_11749_v3 Cicer arietinum L. HOM05D005760 ORTHO05D007113 8.0e-154 548.5 879 41.6
ClCG11G008140 Citrullus lanatus HOM05D005760 ORTHO05D007113 1.4e-153 547.7 836 43.3
Zm00001eb146280 Zea mays HOM05D005760 ORTHO05D007113 3.1e-153 546.6 885 41.7
MELO3C008121.2 Cucumis melo HOM05D005760 ORTHO05D007113 5.2e-153 545.8 875 42.3
CiPaw.08G058900 Carya illinoinensis HOM05D005760 ORTHO05D007113 4.4e-152 542.7 870 43.1
Lj4C496G3 Lonicera japonica HOM05D005760 ORTHO05D007113 9.8e-152 541.6 816 42.5
Migut.C01256 Erythranthe guttata HOM05D005760 ORTHO05D007113 1.7e-151 540.8 820 42.1
Cc10_g10700 Coffea canephora HOM05D005760 ORTHO05D007113 4.9e-151 539.3 892 40.4
SGA_v2.0_scaffold118G32485 Striga asiatica HOM05D005760 ORTHO05D007113 1.4e-150 537.7 881 40.2
SalBow7G4130 Salvia bowleyana HOM05D005760 ORTHO05D007113 4.6e-149 532.7 879 40.4
CAN.G199.9 Capsicum annuum HOM05D005760 ORTHO05D007113 1.3e-148 531.2 892 40.0
MSTRG.25441 Avicennia marina HOM05D005760 ORTHO05D007113 3.0e-148 530.0 941 38.6
Psat6g094080 Pisum sativum HOM05D005760 ORTHO05D007113 6.6e-148 528.9 842 42.9
Hma1.2p1_0004F.1_g004045 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 8.6e-148 528.5 931 40.9
arahy.Tifrunner.gnm1.ann1.H1JXTH Arachis hypogaea HOM05D005760 ORTHO05D007113 1.6e-146 524.2 915 39.6
EL10Ac1g00088 Beta vulgaris HOM05D005760 ORTHO05D007113 2.1e-146 523.9 844 40.8
arahy.Tifrunner.gnm1.ann1.BNJ0D6 Arachis hypogaea HOM05D005760 ORTHO05D007113 1.8e-145 520.8 915 39.2
FAN15G1969 Fragaria x ananassa HOM05D005760 ORTHO05D007113 3.1e-145 520.0 849 41.8
RcHm_v2.0_Chr6g0272031 Rosa chinensis HOM05D005760 ORTHO05D007113 8.9e-145 518.5 877 41.3
GSVIVG01034473001 Vitis vinifera HOM05D005760 ORTHO05D007113 1.2e-144 518.1 828 42.6
Hund27088 Selenicereus undatus HOM05D005760 ORTHO05D007113 2.0e-144 517.3 867 40.0
AUR62004640 Chenopodium quinoa HOM05D005760 ORTHO05D007113 4.4e-144 516.2 829 41.0
DCAR_001048 Daucus carota HOM05D005760 ORTHO05D007113 4.4e-144 516.2 849 41.0
FvH4_2g11773 Fragaria vesca HOM05D005760 ORTHO05D007113 7.5e-144 515.4 829 42.2
Medtr1g050670 Medicago truncatula HOM05D005760 ORTHO05D007113 3.7e-143 513.1 912 39.7
TWI34G1956 Tripterygium wilfordii HOM05D005760 ORTHO05D007113 6.4e-143 512.3 897 39.5
Sopen06g023840 Solanum pennellii HOM05D005760 ORTHO05D007113 8.3e-143 511.9 805 41.2
TPR.G22709 Trifolium pratense HOM05D005760 ORTHO05D007113 8.3e-143 511.9 931 39.7
Aa31LG6G8840 Aethionema arabicum HOM05D005760 ORTHO05D007113 4.1e-142 509.6 905 39.4
Sc23g0001270 Simmondsia chinensis HOM05D005760 ORTHO05D007113 3.0e-140 503.4 901 39.2
SpUn0216_0010 Schrenkiella parvula HOM05D005760 ORTHO05D007113 6.6e-140 502.3 800 41.9
FAN24G1577 Fragaria x ananassa HOM05D005760 ORTHO05D007113 1.5e-139 501.1 854 41.0
BolC6t35790H Brassica oleracea HOM05D005760 ORTHO05D007113 1.9e-139 500.7 844 41.0
BcaC08g43328 Brassica carinata HOM05D005760 ORTHO05D007113 2.5e-139 500.4 844 41.0
C06p06840 Brassica napus HOM05D005760 ORTHO05D007113 7.3e-139 498.8 844 41.0
Thhalv10001809m.g Eutrema salsugineum HOM05D005760 ORTHO05D007113 2.1e-138 497.3 840 39.9
Oeu000547.3 Olea europaea HOM05D005760 ORTHO05D007113 1.1e-137 495.0 837 39.4
SEGI_03904 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 3.1e-137 493.4 912 38.3
CARHR034440 Cardamine hirsuta HOM05D005760 ORTHO05D007113 5.2e-137 492.7 879 40.0
Sp1g30370 Schrenkiella parvula HOM05D005760 ORTHO05D007113 6.8e-137 492.3 842 40.0
BraA06t23439Z Brassica rapa HOM05D005760 ORTHO05D007113 3.4e-136 490.0 849 40.0
Lsat_1_v5_gn_1_10440 Lactuca sativa HOM05D005760 ORTHO05D007113 9.9e-136 488.4 846 40.8
A06p02320 Brassica napus HOM05D005760 ORTHO05D007113 1.3e-135 488.0 871 39.6
BcaB07g33624 Brassica carinata HOM05D005760 ORTHO05D007113 3.7e-135 486.5 911 38.2
Nitab4.5_0000303g0150 Nicotiana tabacum HOM05D005760 ORTHO05D007113 1.6e-133 481.1 817 39.8
Ah.05g178160 Amaranthus hybridus HOM05D005760 ORTHO05D007113 2.7e-133 480.3 833 38.9
Carub.0001s3325 Capsella rubella HOM05D005760 ORTHO05D007113 4.3e-131 473.0 881 38.6
Duzib116G0663 Durio zibethinus HOM05D005760 ORTHO05D007113 1.2e-130 471.5 879 38.0
AL1G50540 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 4.7e-130 469.5 879 38.1
AT1G35660 Arabidopsis thaliana HOM05D005760 ORTHO05D007113 6.2e-130 469.2 883 38.7
ECA152G0004 Erigeron canadensis HOM05D005760 ORTHO05D007113 4.9e-127 459.5 845 38.8
VMungo0720G1167 Vigna mungo HOM05D005760 ORTHO05D007113 9.3e-126 455.3 572 49.0
Gohir.A05G250600 Gossypium hirsutum HOM05D005760 ORTHO05D007113 2.7e-125 453.8 566 49.3
AUR62022696 Chenopodium quinoa HOM05D005760 ORTHO05D007113 2.1e-122 444.1 835 37.7
Sed0013995 Sechium edule HOM05D005760 ORTHO05D007113 3.6e-122 443.4 575 48.9
HanXRQChr04g0107521 Helianthus annuus HOM05D005760 ORTHO05D007113 1.1e-121 441.8 785 39.9
Hma1.2p1_0004F.1_g004050 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 3.4e-120 436.8 553 50.3
Potri.019G083100 Populus trichocarpa HOM05D005760 ORTHO05D007113 3.2e-118 430.3 531 49.5
Lalb_Chr03g0036151 Lupinus albus HOM05D005760 ORTHO05D007113 1.7e-116 424.5 552 47.6
Solyc06g065360.3 Solanum lycopersicum HOM05D005760 ORTHO05D007113 2.0e-112 411.0 499 48.1
Nitab4.5_0002500g0010 Nicotiana tabacum HOM05D005760 ORTHO05D007113 2.4e-105 387.5 755 36.8
unitig_0.g276 Utricularia gibba HOM05D005760 ORTHO05D007113 8.2e-98 362.5 650 39.1
Pp3c15_6360 Physcomitrium patens HOM05D005760 ORTHO05D007113 3.4e-96 357.1 871 31.7
Pp3c15_6380 Physcomitrium patens HOM05D005760 ORTHO05D007113 3.4e-96 357.1 871 31.7
SHI09011 Sapria himalayana HOM05D005760 ORTHO05D007113 2.2e-95 354.4 518 43.4
Mapoly0036s0148 Marchantia polymorpha HOM05D005760 ORTHO05D007113 3.9e-92 343.6 891 31.2
Peaxi162Scf00268g01123 Petunia axillaris HOM05D005760 ORTHO05D007113 4.8e-82 310.1 424 45.5
Eucgr.F04123 Eucalyptus grandis HOM05D005760 ORTHO05D007113 6.1e-77 293.1 315 52.1
AagrBONN_evm.TU.Sc2ySwM_117.2253 Anthoceros agrestis HOM05D005760 ORTHO05D007113 1.4e-73 282.0 955 28.3
Cpa.g.sc66.38 Carica papaya HOM05D005760 ORTHO05D007113 8.0e-61 239.6 521 36.3
Peaxi162Scf00268g01128 Petunia axillaris HOM05D005760 ORTHO05D007113 1.8e-52 211.8 414 35.5
Carub.0001s0936 Capsella rubella HOM05D005760 ORTHO05D007113 4.5e-48 197.2 643 29.5
SEGI_16135 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 3.3e-46 191.0 163 61.3
Gohir.A05G250551 Gossypium hirsutum HOM05D005760 ORTHO05D007113 4.0e-44 184.1 155 62.6
Lalb_Chr03g0036141 Lupinus albus HOM05D005760 ORTHO05D007113 5.4e-41 173.7 118 71.2
C06p06800 Brassica napus HOM05D005760 ORTHO05D007113 1.9e-38 165.2 103 77.7
QL02p033674 Quercus lobata HOM05D005760 ORTHO05D007113 1.0e-36 159.5 290 37.2
Cpa.g.sc66.39 Carica papaya HOM05D005760 ORTHO05D007113 1.1e-30 139.4 237 40.5
CBR_g40969 Chara braunii HOM05D005760 ORTHO05D007113 1.5e-30 139.0 700 24.7
AL1G47130 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 6.6e-23 113.6 192 35.9
QL02p033652 Quercus lobata HOM05D005760 ORTHO05D007113 1.2e-19 102.8 211 37.4
SHI09012 Sapria himalayana HOM05D005760 ORTHO05D007113 4.9e-18 97.4 65 66.2
FAN02G3326 Fragaria x ananassa HOM05D005760 ORTHO05D007113 9.2e-17 93.2 73 58.9
HPP92_025156 Vanilla planifolia HOM05D005760 ORTHO05D007113 4.3e-14 84.3 61 65.6
unitig_0.g275 Utricularia gibba HOM05D005760 ORTHO05D007113 1.3e-07 62.8 66 51.5
Zm00001eb324780 Zea mays HOM05D005760 ORTHO05D000367 1.9e-06 58.9 53 50.9


User provided reference genes

Program Settings