Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.8e-120 435.3 217 100.0
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 3.5e-62 242.3 208 61.1
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 1.7e-61 240.0 194 62.9
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 5.1e-61 238.4 192 64.6
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 8.6e-61 237.7 246 56.5
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.1e-60 237.3 246 56.5
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.9e-60 236.5 179 67.0
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 2.5e-60 236.1 199 62.3
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.2e-59 233.8 210 58.1
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.2e-59 233.8 237 55.7
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 2.8e-59 232.6 220 57.7
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 3.6e-59 232.3 177 66.7
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 4.7e-59 231.9 176 68.8
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 6.2e-59 231.5 186 66.1
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 8.1e-59 231.1 212 59.4
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 8.1e-59 231.1 178 66.3
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.1e-58 230.7 177 65.5
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.1e-58 230.7 225 57.3
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.4e-58 230.3 181 66.3
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.4e-58 230.3 178 67.4
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 1.8e-58 229.9 177 66.1
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.8e-58 229.9 218 59.2
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.8e-58 229.9 218 59.2
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.8e-58 229.9 179 67.0
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 4.0e-58 228.8 179 64.2
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 4.0e-58 228.8 207 57.5
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 5.2e-58 228.4 210 57.6
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 6.9e-58 228.0 221 58.4
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 6.9e-58 228.0 180 63.3
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 6.9e-58 228.0 225 56.4
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 1.2e-57 227.3 176 66.5
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 2.0e-57 226.5 178 64.0
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.0e-57 226.5 177 64.4
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.0e-57 226.5 175 66.9
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 2.0e-57 226.5 216 57.4
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 3.4e-57 225.7 232 56.0
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 3.4e-57 225.7 204 56.9
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 4.4e-57 225.3 180 63.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 4.4e-57 225.3 130 81.5
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 7.6e-57 224.6 213 55.9
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 7.6e-57 224.6 207 58.5
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 9.9e-57 224.2 177 62.7
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 9.9e-57 224.2 241 52.3
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 9.9e-57 224.2 179 64.2
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.3e-56 223.8 222 55.0
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.3e-56 223.8 180 65.0
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 2.2e-56 223.0 221 56.6
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 2.2e-56 223.0 221 56.6
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 2.2e-56 223.0 221 56.6
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 2.9e-56 222.6 211 59.2
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 2.9e-56 222.6 178 64.6
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 4.9e-56 221.9 216 56.5
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 6.4e-56 221.5 193 60.6
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 6.4e-56 221.5 167 65.9
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 8.4e-56 221.1 228 53.1
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 8.4e-56 221.1 186 60.8
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 8.4e-56 221.1 175 62.9
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.1e-55 220.7 205 60.0
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.1e-55 220.7 219 54.8
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.1e-55 220.7 200 58.5
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 1.4e-55 220.3 179 63.7
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.9e-55 219.9 207 57.5
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 2.4e-55 219.5 234 54.7
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 2.4e-55 219.5 208 57.2
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 5.4e-55 218.4 217 53.5
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 5.4e-55 218.4 226 52.7
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 5.4e-55 218.4 169 64.5
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 7.1e-55 218.0 229 54.6
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 9.3e-55 217.6 233 53.6
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 9.3e-55 217.6 223 54.3
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.6e-54 216.9 165 65.5
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 2.1e-54 216.5 175 63.4
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 2.7e-54 216.1 177 63.8
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 2.7e-54 216.1 176 62.5
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 2.7e-54 216.1 173 61.8
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 4.6e-54 215.3 181 64.1
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 4.6e-54 215.3 177 61.6
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 6.0e-54 214.9 165 64.2
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 6.0e-54 214.9 181 60.2
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 6.0e-54 214.9 167 64.7
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 7.8e-54 214.5 193 58.5
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 7.8e-54 214.5 193 58.5
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 2.3e-53 213.0 166 61.4
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 3.0e-53 212.6 226 51.8
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 1.1e-52 210.7 167 65.3
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 5.6e-52 208.4 186 55.4
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 3.6e-51 205.7 194 56.2
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.1e-50 204.1 222 50.5
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 2.0e-49 199.9 212 51.4
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 5.8e-49 198.4 191 57.6
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.2e-46 190.7 150 64.0
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.6e-46 190.3 173 56.6
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.0e-45 187.6 116 74.1
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 5.1e-45 185.3 164 54.9
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 8.7e-45 184.5 114 72.8
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.5e-44 183.0 110 76.4
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 4.3e-44 182.2 170 54.7
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 7.4e-44 181.4 113 73.5
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 2.1e-43 179.9 111 75.7
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.4e-42 177.2 174 54.0
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 5.8e-41 171.8 110 70.0
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 9.9e-41 171.0 180 51.1
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 7.9e-38 161.4 187 52.9
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 1.9e-36 156.8 101 69.3
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 9.0e-34 147.9 181 49.2
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 7.1e-31 138.3 125 60.0
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.3e-27 127.5 190 38.4
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.1e-27 126.7 193 42.0
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.6e-25 119.8 106 58.5
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 1.0e-24 117.9 130 43.1
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 7.9e-22 108.2 108 56.5
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.3e-21 107.5 108 58.3
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.5e-20 104.0 122 52.5
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.3e-11 74.3 150 32.0
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.2e-07 59.7 60 51.7


User provided reference genes

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