Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 8.2e-249 863.2 426 100.0
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 3.9e-174 615.1 426 70.0
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 1.1e-168 597.0 426 67.1
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 1.1e-168 597.0 434 67.7
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 6.0e-167 591.3 403 71.0
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 2.4e-163 579.3 427 65.8
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 1.1e-160 570.5 406 67.2
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 1.4e-160 570.1 425 65.2
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 4.2e-160 568.5 404 66.8
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 6.1e-159 564.7 426 64.1
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 3.0e-158 562.4 404 67.6
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 3.0e-158 562.4 399 67.2
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 3.0e-158 562.4 426 65.5
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 6.7e-158 561.2 400 67.0
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 1.1e-157 560.5 425 64.0
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 1.5e-157 560.1 414 65.7
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 1.5e-157 560.1 427 65.1
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 3.3e-157 558.9 392 69.9
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 3.3e-157 558.9 434 65.0
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 1.3e-156 557.0 398 66.8
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 1.7e-156 556.6 392 67.9
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 2.2e-156 556.2 390 67.4
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 2.2e-156 556.2 455 61.1
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 4.8e-156 555.1 391 70.1
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 4.8e-156 555.1 403 69.0
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 6.3e-156 554.7 390 68.2
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.1e-155 553.9 424 64.6
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 5.3e-155 551.6 394 68.0
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 9.1e-155 550.8 392 68.6
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.2e-154 550.4 415 65.1
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 1.5e-154 550.1 392 66.3
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.5e-154 550.1 391 66.8
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 1.5e-154 550.1 415 65.3
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 1.5e-154 550.1 426 66.2
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 3.4e-154 548.9 415 65.1
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 4.5e-154 548.5 424 63.4
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 4.5e-154 548.5 425 64.2
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 1.0e-153 547.4 393 66.4
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 2.2e-153 546.2 414 63.8
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 5.0e-153 545.0 425 62.8
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 8.5e-153 544.3 410 64.6
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 8.5e-153 544.3 424 63.0
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 1.1e-152 543.9 392 66.1
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 1.9e-152 543.1 431 62.9
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 4.2e-152 542.0 397 65.0
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 7.2e-152 541.2 392 65.8
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 9.4e-152 540.8 418 61.0
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.7e-151 539.3 429 62.0
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 3.6e-151 538.9 415 63.6
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 4.7e-151 538.5 412 62.9
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 7.9e-151 537.7 392 65.6
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 2.3e-150 536.2 420 63.3
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 3.0e-150 535.8 393 66.4
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 5.1e-150 535.0 428 62.6
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.6e-149 532.7 398 64.3
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 9.7e-149 530.8 398 64.1
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 3.1e-147 525.8 392 64.0
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 5.3e-147 525.0 409 63.3
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 2.6e-146 522.7 425 61.4
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 4.5e-146 521.9 390 63.1
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 5.9e-146 521.5 389 63.8
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 7.7e-146 521.2 425 60.9
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 7.7e-146 521.2 396 63.1
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 2.9e-145 519.2 445 58.2
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 2.9e-145 519.2 393 64.6
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.9e-145 519.2 435 59.1
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 8.5e-145 517.7 470 54.9
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 5.5e-144 515.0 470 56.4
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.7e-143 512.7 395 63.8
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 3.6e-143 512.3 416 62.3
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 8.0e-143 511.1 417 61.2
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 1.4e-142 510.4 417 61.9
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 1.4e-142 510.4 417 61.9
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 1.8e-142 510.0 421 60.8
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 5.2e-142 508.4 393 63.6
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 1.5e-141 506.9 404 62.1
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 3.3e-141 505.8 368 64.9
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 9.7e-141 504.2 423 60.0
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 5.3e-139 498.4 402 61.7
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 1.3e-137 493.8 405 60.7
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 5.0e-137 491.9 377 63.4
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 6.5e-137 491.5 442 57.5
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 1.7e-132 476.9 417 58.3
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 3.5e-130 469.2 452 53.1
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 1.0e-129 467.6 410 57.3
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.0e-126 457.6 331 65.9
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 5.7e-125 451.8 368 59.8
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 7.5e-125 451.4 332 65.4
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 5.5e-120 435.3 415 51.6
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 2.1e-119 433.3 402 56.7
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.4e-118 430.6 329 60.5
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.6e-117 426.4 341 62.2
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 1.4e-115 420.6 397 52.6
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 1.2e-114 417.5 314 62.7
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 2.3e-113 413.3 346 60.4
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 5.6e-112 408.7 329 61.4
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 8.0e-111 404.8 282 67.7
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.3e-108 397.5 350 58.6
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 4.7e-103 379.0 328 58.5
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 6.8e-102 375.2 410 48.0
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 7.5e-101 371.7 369 50.9
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 3.7e-100 369.4 289 61.6
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 6.2e-95 352.1 283 61.5
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 6.2e-95 352.1 283 61.5
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 3.6e-87 326.2 402 44.8
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 7.1e-83 312.0 456 40.8
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 6.6e-81 305.4 237 64.1
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 6.6e-81 305.4 241 63.5
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.2e-79 301.2 241 61.8
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 3.6e-79 299.7 213 64.3
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 5.3e-70 269.2 350 44.3
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.2e-69 268.1 190 68.9
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 3.3e-56 223.4 170 68.8
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 7.6e-53 212.2 148 68.9
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 1.4e-51 208.0 158 62.0
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.2e-50 204.9 431 34.8
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 3.5e-50 203.4 249 43.0
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 6.7e-49 199.1 184 55.4
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 6.3e-47 192.6 163 58.9
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.9e-43 181.0 145 58.6
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 6.9e-38 162.5 435 29.9
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.7e-36 157.9 425 30.4
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 1.4e-35 154.8 432 30.3
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 1.6e-34 151.4 160 56.2
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.6e-34 151.4 120 62.5
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 1.5e-32 144.8 424 29.7
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 5.7e-32 142.9 408 30.1
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 5.3e-30 136.3 113 55.8
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 9.4e-27 125.6 101 58.4
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 4.4e-24 116.7 408 28.2
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 4.8e-23 113.2 235 35.7
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 4.8e-23 113.2 76 68.4
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 1.5e-19 101.7 73 61.6
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.2e-19 100.1 107 54.2
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 6.1e-18 96.3 96 56.2
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 4.0e-17 93.6 93 58.1
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 1.7e-12 78.2 53 64.2
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 2.4e-06 57.8 37 73.0


User provided reference genes

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