Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.0e-75 286.6 140 100.0
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 5.4e-40 167.9 90 88.9
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 5.1e-30 134.8 72 88.9
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 4.2e-16 88.6 144 38.2
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 2.7e-15 85.9 142 39.4
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 4.6e-15 85.1 117 43.6
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 1.3e-14 83.6 125 39.2
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 2.3e-14 82.8 123 35.8
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 3.0e-14 82.4 132 37.9
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 5.1e-14 81.6 129 38.8
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 8.7e-14 80.9 125 41.6
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.1e-13 80.5 122 39.3
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.9e-13 79.7 134 38.8
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 2.5e-13 79.3 129 36.4
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 3.3e-13 79.0 127 38.6
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 5.7e-13 78.2 74 52.7
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 5.7e-13 78.2 111 41.4
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 7.4e-13 77.8 126 36.5
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.3e-12 77.0 136 34.6
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.6e-12 76.6 124 35.5
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 2.1e-12 76.3 126 35.7
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 2.8e-12 75.9 126 36.5
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 3.7e-12 75.5 127 34.6
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 4.8e-12 75.1 127 37.0
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 4.8e-12 75.1 140 36.4
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 4.8e-12 75.1 128 36.7
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.1e-11 73.9 131 36.6
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 1.1e-11 73.9 132 37.9
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.1e-11 73.9 126 35.7
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 1.1e-11 73.9 121 37.2
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.1e-11 73.9 126 35.7
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 1.1e-11 73.9 131 39.7
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 1.1e-11 73.9 62 58.1
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.4e-11 73.6 117 35.9
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.8e-11 73.2 111 36.9
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 1.8e-11 73.2 69 47.8
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.8e-11 73.2 127 36.2
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 3.1e-11 72.4 135 37.0
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 4.1e-11 72.0 125 36.8
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 4.1e-11 72.0 129 35.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 4.1e-11 72.0 131 38.2
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 5.3e-11 71.6 141 35.5
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 5.3e-11 71.6 129 34.9
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 6.9e-11 71.2 74 50.0
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 6.9e-11 71.2 130 33.8
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 6.9e-11 71.2 147 35.4
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 6.9e-11 71.2 63 52.4
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 6.9e-11 71.2 67 49.3
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 9.0e-11 70.9 133 34.6
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 9.0e-11 70.9 110 35.5
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 1.2e-10 70.5 63 58.7
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 1.2e-10 70.5 63 58.7
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 1.2e-10 70.5 63 58.7
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.2e-10 70.5 130 33.8
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.2e-10 70.5 126 33.3
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 2.0e-10 69.7 76 53.9
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 2.6e-10 69.3 68 54.4
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 2.6e-10 69.3 117 40.2
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 3.4e-10 68.9 122 36.9
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 4.5e-10 68.6 63 57.1
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 4.5e-10 68.6 63 57.1
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 4.5e-10 68.6 126 39.7
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 4.5e-10 68.6 66 51.5
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 4.5e-10 68.6 132 33.3
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 4.5e-10 68.6 64 54.7
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 4.5e-10 68.6 66 51.5
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 5.9e-10 68.2 126 32.5
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 5.9e-10 68.2 114 41.2
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 7.6e-10 67.8 129 33.3
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.0e-09 67.4 121 37.2
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 1.0e-09 67.4 89 41.6
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.0e-09 67.4 63 49.2
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 1.0e-09 67.4 64 53.1
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 1.0e-09 67.4 62 48.4
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.3e-09 67.0 124 38.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.3e-09 67.0 120 36.7
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 1.7e-09 66.6 118 38.1
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 1.7e-09 66.6 67 55.2
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.7e-09 66.6 134 31.3
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.2e-09 66.2 130 31.5
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 2.2e-09 66.2 64 53.1
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 2.9e-09 65.9 64 50.0
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 3.8e-09 65.5 73 49.3
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 5.0e-09 65.1 131 31.3
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 5.0e-09 65.1 35 77.1
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 5.0e-09 65.1 66 53.0
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 1.1e-08 63.9 108 38.9
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 1.1e-08 63.9 108 38.9
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 1.4e-08 63.5 85 43.5
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.4e-08 63.5 116 37.1
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 2.5e-08 62.8 144 34.7
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 4.2e-08 62.0 109 37.6
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 4.2e-08 62.0 46 63.0
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 4.2e-08 62.0 139 34.5
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 4.2e-08 62.0 94 39.4
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 9.3e-08 60.8 134 35.8
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 1.2e-07 60.5 65 47.7
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 1.6e-07 60.1 144 33.3
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 2.7e-07 59.3 133 30.8
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 1.0e-06 57.4 70 44.3
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 1.0e-06 57.4 108 31.5


User provided reference genes

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