Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0075 Ceratophyllum demersum HOM05D001982 ORTHO05D008035 5.0e-63 244.2 117 100.0
CDE04G2352 Ceratophyllum demersum HOM05D001982 ORTHO05D008035 6.4e-26 120.9 63 92.1
Atru.chr9.94 Acer truncatum HOM05D001982 ORTHO05D008035 1.3e-18 96.7 64 68.8
Ciclev10018888m.g Citrus clementina HOM05D001982 ORTHO05D008035 1.4e-17 93.2 64 64.1
GSVIVG01029333001 Vitis vinifera HOM05D001982 ORTHO05D008035 1.4e-17 93.2 62 67.7
Cc04_g08460 Coffea canephora HOM05D001982 ORTHO05D008035 2.4e-17 92.4 64 64.1
Lj9A413T50 Lonicera japonica HOM05D001982 ORTHO05D008035 3.2e-17 92.0 69 63.8
Aa31LG8G5970 Aethionema arabicum HOM05D001982 ORTHO05D008035 4.1e-17 91.7 63 65.1
Nn3g16143 Nelumbo nucifera HOM05D001982 ORTHO05D008035 4.1e-17 91.7 64 62.5
Nn4g26692 Nelumbo nucifera HOM05D001982 ORTHO05D008035 4.1e-17 91.7 64 62.5
Cfa021434 Carpinus fangiana HOM05D001982 ORTHO05D008035 5.4e-17 91.3 63 63.5
Haze_18329 Corylus avellana HOM05D001982 ORTHO05D008035 5.4e-17 91.3 63 63.5
Eucgr.H00644 Eucalyptus grandis HOM05D001982 ORTHO05D008035 1.2e-16 90.1 63 63.5
Prupe.5G243600 Prunus persica HOM05D001982 ORTHO05D008035 1.2e-16 90.1 63 61.9
TAR629G3132 Trochodendron aralioides HOM05D001982 ORTHO05D008035 1.2e-16 90.1 63 61.9
Aqoxy3G04303 Aquilegia oxysepala HOM05D001982 ORTHO05D008035 1.6e-16 89.7 63 65.1
arahy.Tifrunner.gnm1.ann1.60FNUJ Arachis hypogaea HOM05D001982 ORTHO05D008035 2.1e-16 89.4 63 61.9
QL10p034062 Quercus lobata HOM05D001982 ORTHO05D008035 2.1e-16 89.4 64 59.4
TPR.G19890 Trifolium pratense HOM05D001982 ORTHO05D008035 2.1e-16 89.4 64 60.9
Dinv09728 Davidia involucrata HOM05D001982 ORTHO05D008035 2.7e-16 89.0 61 65.6
Gohir.D11G319900 Gossypium hirsutum HOM05D001982 ORTHO05D008035 3.5e-16 88.6 62 64.5
Gorai.007G350000 Gossypium raimondii HOM05D001982 ORTHO05D008035 3.5e-16 88.6 62 64.5
Gohir.A11G304500 Gossypium hirsutum HOM05D001982 ORTHO05D008035 4.6e-16 88.2 62 62.9
MD14G1245800 Malus domestica HOM05D001982 ORTHO05D008035 4.6e-16 88.2 63 58.7
Hund02599 Selenicereus undatus HOM05D001982 ORTHO05D008035 4.6e-16 88.2 63 60.3
MSTRG.23211 Avicennia marina HOM05D001982 ORTHO05D008035 7.8e-16 87.4 61 63.9
COL.COLO4_24905 Corchorus olitorius HOM05D001982 ORTHO05D008035 7.8e-16 87.4 62 62.9
FAN13G2897 Fragaria x ananassa HOM05D001982 ORTHO05D008035 7.8e-16 87.4 69 59.4
Hma1.2p1_0493F.1_g164870 Hydrangea macrophylla HOM05D001982 ORTHO05D008035 1.0e-15 87.0 61 63.9
Medtr6g077830 Medicago truncatula HOM05D001982 ORTHO05D008035 1.0e-15 87.0 63 58.7
Sabra12G0024600 Salix brachista HOM05D001982 ORTHO05D008035 1.3e-15 86.7 64 60.9
Sp3g17250 Schrenkiella parvula HOM05D001982 ORTHO05D008035 1.3e-15 86.7 63 65.1
AL3G32550 Arabidopsis lyrata HOM05D001982 ORTHO05D008035 1.7e-15 86.3 63 61.9
HanXRQChr16g0503331 Helianthus annuus HOM05D001982 ORTHO05D008035 1.7e-15 86.3 63 61.9
Lalb_Chr14g0370231 Lupinus albus HOM05D001982 ORTHO05D008035 1.7e-15 86.3 63 58.7
Nitab4.5_0003040g0110 Nicotiana tabacum HOM05D001982 ORTHO05D008035 1.7e-15 86.3 61 63.9
Potri.012G035900 Populus trichocarpa HOM05D001982 ORTHO05D008035 1.7e-15 86.3 64 60.9
THA.LOC104818545 Tarenaya hassleriana HOM05D001982 ORTHO05D008035 1.7e-15 86.3 63 60.3
Thhalv10020089m.g Eutrema salsugineum HOM05D001982 ORTHO05D008035 2.3e-15 85.9 63 60.3
Nitab4.5_0000782g0080 Nicotiana tabacum HOM05D001982 ORTHO05D008035 2.3e-15 85.9 61 63.9
Rhsim08G0124900 Rhododendron simsii HOM05D001982 ORTHO05D008035 2.3e-15 85.9 63 60.3
TAR371G0897 Trochodendron aralioides HOM05D001982 ORTHO05D008035 2.3e-15 85.9 63 58.7
CSS0020955 Camellia sinensis var. sinensis HOM05D001982 ORTHO05D008035 3.0e-15 85.5 63 61.9
CARHR094580 Cardamine hirsuta HOM05D001982 ORTHO05D008035 3.0e-15 85.5 63 61.9
MD06G1239700 Malus domestica HOM05D001982 ORTHO05D008035 3.0e-15 85.5 63 57.1
RcHm_v2.0_Chr7g0177091 Rosa chinensis HOM05D001982 ORTHO05D008035 3.0e-15 85.5 83 51.8
Ca_11834_v3 Cicer arietinum L. HOM05D001982 ORTHO05D008035 3.9e-15 85.1 63 58.7
FvH4_5g18390 Fragaria vesca HOM05D001982 ORTHO05D008035 3.9e-15 85.1 63 61.9
Lsat_1_v5_gn_0_10501 Lactuca sativa HOM05D001982 ORTHO05D008035 3.9e-15 85.1 63 57.1
BcaB06g25974 Brassica carinata HOM05D001982 ORTHO05D008035 5.1e-15 84.7 64 59.4
Psat1g121960 Pisum sativum HOM05D001982 ORTHO05D008035 5.1e-15 84.7 63 58.7
Sc04g0004660 Simmondsia chinensis HOM05D001982 ORTHO05D008035 5.1e-15 84.7 62 59.7
Lj2g0027511 Lotus japonicus HOM05D001982 ORTHO05D008035 6.6e-15 84.3 63 58.7
Lalb_Chr24g0398561 Lupinus albus HOM05D001982 ORTHO05D008035 6.6e-15 84.3 64 56.2
EL10Ac5g11111 Beta vulgaris HOM05D001982 ORTHO05D008035 8.6e-15 84.0 62 58.1
Carub.0003s1900 Capsella rubella HOM05D001982 ORTHO05D008035 8.6e-15 84.0 62 61.3
PGR083G0482 Punica granatum HOM05D001982 ORTHO05D008035 8.6e-15 84.0 62 59.7
Duzib128G1857 Durio zibethinus HOM05D001982 ORTHO05D008035 1.1e-14 83.6 61 62.3
SEGI_09403 Sequoiadendron giganteum HOM05D001982 ORTHO05D008035 1.1e-14 83.6 63 60.3
SEGI_16116 Sequoiadendron giganteum HOM05D001982 ORTHO05D008035 1.1e-14 83.6 63 60.3
C05p46060 Brassica napus HOM05D001982 ORTHO05D008035 1.5e-14 83.2 64 62.5
BolC5t33333H Brassica oleracea HOM05D001982 ORTHO05D008035 1.5e-14 83.2 64 62.5
BraA05t21885Z Brassica rapa HOM05D001982 ORTHO05D008035 1.5e-14 83.2 64 62.5
Migut.O00266 Erythranthe guttata HOM05D001982 ORTHO05D008035 1.5e-14 83.2 61 59.0
Lalb_Chr22g0353981 Lupinus albus HOM05D001982 ORTHO05D008035 1.5e-14 83.2 63 55.6
Potri.015G028101 Populus trichocarpa HOM05D001982 ORTHO05D008035 1.9e-14 82.8 63 58.7
Ah.11g047950 Amaranthus hybridus HOM05D001982 ORTHO05D008035 3.3e-14 82.0 63 58.7
ATR0618G229 Amborella trichopoda HOM05D001982 ORTHO05D008035 3.3e-14 82.0 63 58.7
arahy.Tifrunner.gnm1.ann1.RQR8UB Arachis hypogaea HOM05D001982 ORTHO05D008035 3.3e-14 82.0 58 62.1
FAN04G2680 Fragaria x ananassa HOM05D001982 ORTHO05D008035 3.3e-14 82.0 60 63.3
Manes.02G218300 Manihot esculenta HOM05D001982 ORTHO05D008035 3.3e-14 82.0 64 56.2
Peaxi162Scf00171g00246 Petunia axillaris HOM05D001982 ORTHO05D008035 3.3e-14 82.0 61 59.0
VMungo0464G1225 Vigna mungo HOM05D001982 ORTHO05D008035 3.3e-14 82.0 61 59.0
AT3G19180 Arabidopsis thaliana HOM05D001982 ORTHO05D008035 4.3e-14 81.6 63 58.7
A05p30460 Brassica napus HOM05D001982 ORTHO05D008035 4.3e-14 81.6 64 60.9
AUR62021583 Chenopodium quinoa HOM05D001982 ORTHO05D008035 4.3e-14 81.6 63 55.6
Glyma.09G164700 Glycine max HOM05D001982 ORTHO05D008035 4.3e-14 81.6 61 57.4
Glyma.16G213100 Glycine max HOM05D001982 ORTHO05D008035 4.3e-14 81.6 61 57.4
PSO782G2505 Papaver somniferum HOM05D001982 ORTHO05D008035 4.3e-14 81.6 64 57.8
TWI15G0476 Tripterygium wilfordii HOM05D001982 ORTHO05D008035 4.3e-14 81.6 62 58.1
AUR62008507 Chenopodium quinoa HOM05D001982 ORTHO05D008035 5.6e-14 81.3 63 55.6
Phvul.004G139200 Phaseolus vulgaris HOM05D001982 ORTHO05D008035 5.6e-14 81.3 61 57.4
Thecc.05G197300 Theobroma cacao HOM05D001982 ORTHO05D008035 5.6e-14 81.3 63 57.1
PSO063G1521 Papaver somniferum HOM05D001982 ORTHO05D008035 7.3e-14 80.9 63 58.7
CANSAT64G0368 Cannabis sativa HOM05D001982 ORTHO05D008035 1.2e-13 80.1 63 61.9
ECA232G1526 Erigeron canadensis HOM05D001982 ORTHO05D008035 1.2e-13 80.1 63 55.6
Sabra15G0023200 Salix brachista HOM05D001982 ORTHO05D008035 1.2e-13 80.1 63 55.6
Hund09878 Selenicereus undatus HOM05D001982 ORTHO05D008035 1.2e-13 80.1 63 57.1
PGSC0003DMG400010151 Solanum tuberosum HOM05D001982 ORTHO05D008035 1.2e-13 80.1 61 59.0
SGA_v2.0_scaffold90G27748 Striga asiatica HOM05D001982 ORTHO05D008035 1.6e-13 79.7 61 60.7
vmacro17745 Vaccinium macrocarpon HOM05D001982 ORTHO05D008035 1.6e-13 79.7 58 58.6
CAN.G929.22 Capsicum annuum HOM05D001982 ORTHO05D008035 2.1e-13 79.3 61 59.0
Solyc03g098610.3 Solanum lycopersicum HOM05D001982 ORTHO05D008035 8.1e-13 77.4 61 57.4
Sopen03g029320 Solanum pennellii HOM05D001982 ORTHO05D008035 8.1e-13 77.4 61 57.4
DCAR_023244 Daucus carota HOM05D001982 ORTHO05D008035 1.1e-12 77.0 64 56.2
CiPaw.16G073000 Carya illinoinensis HOM05D001982 ORTHO05D008035 1.8e-12 76.3 64 48.4
CsaV3_6G002460 Cucumis sativus L. HOM05D001982 ORTHO05D008035 3.1e-12 75.5 61 52.5
SalBow5G3030 Salvia bowleyana HOM05D001982 ORTHO05D008035 3.1e-12 75.5 66 56.1
Oeu038398.1 Olea europaea HOM05D001982 ORTHO05D008035 4.0e-12 75.1 63 49.2
ClCG08G001990 Citrullus lanatus HOM05D001982 ORTHO05D008035 8.9e-12 73.9 61 50.8
Sed0006637 Sechium edule HOM05D001982 ORTHO05D008035 1.5e-11 73.2 61 49.2
unitig_26.g10113 Utricularia gibba HOM05D001982 ORTHO05D008035 3.4e-11 72.0 61 52.5
Zm00001eb066330 Zea mays HOM05D001982 ORTHO05D008035 5.8e-11 71.2 60 50.0
HPP92_022060 Vanilla planifolia HOM05D001982 ORTHO05D008035 4.9e-10 68.2 63 49.2
CDE07G0628 Ceratophyllum demersum HOM05D001982 ORTHO05D130542 5.6e-06 54.7 37 81.1


User provided reference genes

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