Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 2.8e-64 248.4 126 100.0
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 8.1e-35 150.6 80 96.2
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 3.8e-24 115.2 83 72.3
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 3.2e-23 112.1 83 71.1
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 2.7e-22 109.0 83 66.3
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 2.7e-22 109.0 82 68.3
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 1.0e-21 107.1 83 65.1
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.3e-21 106.7 83 66.3
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 1.7e-21 106.3 82 67.1
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 3.0e-21 105.5 83 68.7
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 3.0e-21 105.5 82 69.5
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 5.1e-21 104.8 83 66.3
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 5.1e-21 104.8 80 66.2
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 5.1e-21 104.8 80 67.5
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 6.6e-21 104.4 84 64.3
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 6.6e-21 104.4 80 66.2
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 6.6e-21 104.4 80 66.2
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 8.7e-21 104.0 80 68.8
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 8.7e-21 104.0 83 63.9
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.1e-20 103.6 83 67.5
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 1.1e-20 103.6 91 60.4
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 1.5e-20 103.2 80 65.0
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.9e-20 102.8 83 65.1
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 1.9e-20 102.8 82 62.2
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 2.5e-20 102.4 84 63.1
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.5e-20 102.4 83 66.3
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 3.3e-20 102.1 80 68.8
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 4.3e-20 101.7 80 65.0
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 4.3e-20 101.7 80 65.0
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 5.6e-20 101.3 82 67.1
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 5.6e-20 101.3 83 61.4
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 5.6e-20 101.3 80 63.8
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 7.3e-20 100.9 80 63.8
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 7.3e-20 100.9 80 62.5
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 1.6e-19 99.8 83 63.9
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.1e-19 99.4 85 64.7
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 3.6e-19 98.6 83 63.9
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 3.6e-19 98.6 83 63.9
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 3.6e-19 98.6 83 63.9
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 3.6e-19 98.6 83 63.9
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 3.6e-19 98.6 83 63.9
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 6.2e-19 97.8 79 63.3
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 6.2e-19 97.8 83 63.9
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 6.2e-19 97.8 80 62.5
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.1e-18 97.1 83 62.7
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 1.1e-18 97.1 80 60.0
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.4e-18 96.7 83 60.2
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.4e-18 96.7 80 61.2
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.4e-18 96.7 80 58.8
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 1.4e-18 96.7 80 61.2
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.8e-18 96.3 82 63.4
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.8e-18 96.3 82 63.4
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.8e-18 96.3 83 63.9
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 3.1e-18 95.5 83 62.7
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 3.1e-18 95.5 83 62.7
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 4.0e-18 95.1 80 62.5
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 6.9e-18 94.4 80 61.2
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 6.9e-18 94.4 77 66.2
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 9.0e-18 94.0 80 61.2
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.2e-17 93.6 80 57.5
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.2e-17 93.6 83 60.2
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-17 93.2 83 61.4
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.5e-17 93.2 80 61.2
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.6e-17 92.4 83 56.6
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.6e-17 92.4 82 61.0
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 2.6e-17 92.4 83 59.0
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 3.4e-17 92.0 83 60.2
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 5.8e-17 91.3 83 60.2
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 5.8e-17 91.3 83 60.2
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 5.8e-17 91.3 88 56.8
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 7.6e-17 90.9 83 60.2
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 7.6e-17 90.9 83 60.2
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 9.9e-17 90.5 83 56.6
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 1.3e-16 90.1 83 59.0
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.3e-16 90.1 83 59.0
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.3e-16 90.1 80 60.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.7e-16 89.7 83 56.6
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 2.2e-16 89.4 88 55.7
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 2.2e-16 89.4 78 61.5
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 2.9e-16 89.0 83 56.6
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 2.9e-16 89.0 75 65.3
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 3.8e-16 88.6 83 55.4
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 4.9e-16 88.2 80 58.8
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.4e-16 87.8 82 59.8
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 6.4e-16 87.8 84 57.1
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 8.4e-16 87.4 83 59.0
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 8.4e-16 87.4 82 58.5
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 8.4e-16 87.4 82 58.5
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 1.1e-15 87.0 84 56.0
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.2e-14 83.6 82 54.9
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 7.9e-14 80.9 82 53.7
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.3e-13 80.1 75 56.0
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 2.3e-13 79.3 84 52.4
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 3.0e-13 79.0 81 54.3
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 3.9e-13 78.6 80 46.2
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 8.7e-13 77.4 79 51.9
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.1e-12 77.0 71 56.3
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 1.5e-12 76.6 81 53.1
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 9.6e-12 73.9 79 49.4
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 2.8e-11 72.4 172 34.3
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 4.8e-11 71.6 86 46.5
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 9.0e-10 67.4 80 46.2
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 2.0e-09 66.2 90 44.4
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 1.7e-08 63.2 39 79.5
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 1.1e-07 60.5 42 71.4
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 1.4e-07 60.1 64 43.8
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 5.5e-07 58.2 40 70.0
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 5.5e-07 58.2 82 47.6
Sc06g0010190 Simmondsia chinensis HOM05D006634 ORTHO05D008282 1.2e-06 57.0 40 70.0
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.6e-06 56.6 65 49.2
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 2.1e-06 56.2 37 73.0
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 2.1e-06 56.2 89 37.1
Potri.009G013701 Populus trichocarpa HOM05D006634 ORTHO05D008282 2.7e-06 55.8 42 69.0
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 4.6e-06 55.1 40 67.5


User provided reference genes

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