Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 5.3e-93 344.4 175 100.0
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 4.0e-48 195.3 185 58.9
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 4.1e-45 185.3 185 57.8
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 2.7e-44 182.6 189 57.7
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 4.5e-44 181.8 140 70.7
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.7e-43 179.9 133 72.2
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.7e-43 179.9 187 56.7
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.1e-42 177.2 156 60.3
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 3.3e-42 175.6 188 58.5
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 5.6e-42 174.9 174 56.9
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 1.2e-41 173.7 166 58.4
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 1.6e-41 173.3 130 70.0
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.6e-41 173.3 134 67.2
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.6e-41 173.3 174 57.5
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.6e-41 173.3 128 68.0
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 2.1e-41 172.9 141 62.4
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 2.8e-41 172.6 134 67.9
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 2.8e-41 172.6 132 67.4
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 3.6e-41 172.2 185 53.5
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 3.6e-41 172.2 125 72.8
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 8.0e-41 171.0 190 56.8
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 8.0e-41 171.0 181 56.4
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 8.0e-41 171.0 125 72.0
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 1.0e-40 170.6 124 71.8
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 1.0e-40 170.6 125 72.0
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.8e-40 169.9 189 55.6
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 1.8e-40 169.9 143 61.5
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 3.0e-40 169.1 160 57.5
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 3.0e-40 169.1 133 67.7
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 4.0e-40 168.7 178 55.6
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 5.2e-40 168.3 150 63.3
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 6.8e-40 167.9 152 63.8
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 6.8e-40 167.9 136 64.0
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 8.9e-40 167.5 189 56.1
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 8.9e-40 167.5 145 61.4
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.5e-39 166.8 171 57.9
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 1.5e-39 166.8 169 56.2
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 2.0e-39 166.4 127 66.9
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 2.0e-39 166.4 154 61.0
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 2.0e-39 166.4 154 61.0
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.6e-39 166.0 171 56.7
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 2.6e-39 166.0 143 60.8
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 3.4e-39 165.6 179 57.5
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 4.4e-39 165.2 140 61.4
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 5.7e-39 164.9 148 62.8
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 5.7e-39 164.9 148 62.8
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 7.5e-39 164.5 145 60.0
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 1.7e-38 163.3 152 57.2
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 1.7e-38 163.3 150 60.0
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.7e-38 163.3 133 65.4
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 2.9e-38 162.5 135 65.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 2.9e-38 162.5 132 64.4
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 4.9e-38 161.8 180 52.2
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 6.4e-38 161.4 133 63.2
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 6.4e-38 161.4 187 51.9
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 8.3e-38 161.0 114 71.1
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.1e-37 160.6 138 61.6
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 1.1e-37 160.6 137 63.5
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.4e-37 160.2 117 70.1
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.8e-37 159.8 136 64.7
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 1.8e-37 159.8 193 52.8
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 1.8e-37 159.8 193 52.8
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 2.4e-37 159.5 138 60.1
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 3.2e-37 159.1 136 65.4
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 7.0e-37 157.9 154 58.4
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 9.2e-37 157.5 117 69.2
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 9.2e-37 157.5 134 61.9
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 9.2e-37 157.5 145 56.6
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 9.2e-37 157.5 144 59.7
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.2e-36 157.1 178 51.7
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 1.2e-36 157.1 146 58.2
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.6e-36 156.8 154 57.1
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.6e-36 156.8 155 57.4
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 2.0e-36 156.4 170 55.3
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 2.0e-36 156.4 190 53.7
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 2.7e-36 156.0 160 58.1
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 3.5e-36 155.6 186 50.5
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.6e-36 155.2 157 58.0
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 5.9e-36 154.8 186 47.8
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.8e-36 154.5 157 57.3
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.8e-36 154.5 157 57.3
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 7.8e-36 154.5 192 51.0
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 1.0e-35 154.1 142 60.6
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 1.0e-35 154.1 157 58.0
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.0e-35 154.1 138 62.3
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.3e-35 152.9 138 61.6
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 3.9e-35 152.1 120 64.2
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 6.6e-35 151.4 148 60.1
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 6.6e-35 151.4 149 60.4
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 8.6e-35 151.0 134 58.2
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 1.5e-34 150.2 127 57.5
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.5e-34 149.4 166 52.4
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 4.3e-34 148.7 135 60.0
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 1.2e-33 147.1 182 51.6
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.1e-33 146.4 122 60.7
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.1e-33 146.4 142 54.9
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 3.6e-33 145.6 142 54.2
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 4.0e-32 142.1 129 60.5
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 2.0e-31 139.8 114 61.4
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 3.4e-31 139.0 127 59.8
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 9.8e-31 137.5 159 48.4
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 9.8e-31 137.5 133 57.9
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.7e-30 135.6 105 65.7
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 8.3e-30 134.4 127 58.3
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 7.8e-28 127.9 113 62.8
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 8.6e-27 124.4 126 50.8
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 2.5e-26 122.9 173 46.8
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 9.5e-26 120.9 165 47.3
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.2e-25 120.6 109 53.2
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.2e-25 120.6 90 67.8
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 2.1e-25 119.8 124 46.8
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 4.7e-25 118.6 136 53.7
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 8.1e-25 117.9 124 55.6
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.8e-24 116.7 107 61.7
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 1.8e-24 116.7 136 45.6
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 4.4e-23 112.1 131 47.3
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 7.5e-23 111.3 113 55.8
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 6.4e-22 108.2 97 60.8
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 6.4e-14 81.6 131 39.7
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.2e-12 77.4 68 60.3
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.0e-11 74.3 98 43.9


User provided reference genes

Program Settings