Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2718 Ceratophyllum demersum HOM05D001826 ORTHO05D018157 1.5e-159 566.2 302 100.0
CDE04G2063 Ceratophyllum demersum HOM05D001826 ORTHO05D004184 6.7e-120 434.5 266 88.3
CDE04G1203 Ceratophyllum demersum HOM05D001826 ORTHO05D018157 2.3e-43 180.3 114 89.5
MELO3C006129.2 Cucumis melo HOM05D001826 ORTHO05D004184 1.2e-39 167.9 236 48.3
ClCG05G001700 Citrullus lanatus HOM05D001826 ORTHO05D004184 1.5e-39 167.5 229 49.8
TAR375G0082 Trochodendron aralioides HOM05D001826 ORTHO05D004184 2.0e-39 167.2 274 42.3
CSS0031422 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 5.8e-39 165.6 234 49.1
Nn6g33530 Nelumbo nucifera HOM05D001826 ORTHO05D004184 1.3e-38 164.5 227 45.8
CSS0017008 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 2.2e-38 163.7 205 49.8
TAR374G0002 Trochodendron aralioides HOM05D001826 ORTHO05D004184 3.8e-38 162.9 280 42.1
QL08p049532 Quercus lobata HOM05D001826 ORTHO05D004184 1.9e-37 160.6 283 43.1
Cpa.g.sc18.224 Carica papaya HOM05D001826 ORTHO05D004184 3.2e-37 159.8 265 41.1
Nitab4.5_0001620g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 3.2e-37 159.8 199 51.8
FvH4_7g13660 Fragaria vesca HOM05D001826 ORTHO05D004184 4.2e-37 159.5 208 48.6
Actinidia33430 Actinidia chinensis HOM05D001826 ORTHO05D004184 5.4e-37 159.1 200 51.5
CsaV3_3G009090 Cucumis sativus L. HOM05D001826 ORTHO05D004184 5.4e-37 159.1 237 47.7
CSS0033058 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 7.1e-37 158.7 205 48.8
Atru.chr5.450 Acer truncatum HOM05D001826 ORTHO05D004184 9.3e-37 158.3 226 47.8
FAN01G1586 Fragaria x ananassa HOM05D001826 ORTHO05D004184 1.2e-36 157.9 208 48.1
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 1.2e-36 157.9 229 48.0
MD07G1141400 Malus domestica HOM05D001826 ORTHO05D004184 1.2e-36 157.9 284 41.5
Nitab4.5_0003111g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 3.5e-36 156.4 198 51.5
Sed0024442 Sechium edule HOM05D001826 ORTHO05D004184 3.5e-36 156.4 207 50.7
Sabra14G0058600 Salix brachista HOM05D001826 ORTHO05D004184 6.0e-36 155.6 213 47.9
Thecc.01G363300 Theobroma cacao HOM05D001826 ORTHO05D004184 7.9e-36 155.2 202 50.5
MD01G1053700 Malus domestica HOM05D001826 ORTHO05D004184 1.3e-35 154.5 282 40.1
Eucgr.E00180 Eucalyptus grandis HOM05D001826 ORTHO05D004184 1.7e-35 154.1 285 40.0
CAN.G78.31 Capsicum annuum HOM05D001826 ORTHO05D004184 2.3e-35 153.7 209 50.2
FAN03G3317 Fragaria x ananassa HOM05D001826 ORTHO05D004184 1.5e-34 151.0 204 46.6
Gohir.A12G105000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 1.9e-34 150.6 260 43.8
Potri.014G080800 Populus trichocarpa HOM05D001826 ORTHO05D004184 1.9e-34 150.6 211 47.9
vmacro20955 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.9e-34 150.6 208 49.0
FAN10G1065 Fragaria x ananassa HOM05D001826 ORTHO05D004184 3.3e-34 149.8 204 46.6
Prupe.2G162700 Prunus persica HOM05D001826 ORTHO05D004184 4.3e-34 149.4 208 46.2
CiPaw.01G057800 Carya illinoinensis HOM05D001826 ORTHO05D004184 5.6e-34 149.1 254 44.5
Haze_15465 Corylus avellana HOM05D001826 ORTHO05D004184 1.3e-33 147.9 195 49.2
AL6G52810 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 1.6e-33 147.5 201 49.3
Gorai.008G118000 Gossypium raimondii HOM05D001826 ORTHO05D004184 1.6e-33 147.5 203 49.8
Rhsim07G0018000 Rhododendron simsii HOM05D001826 ORTHO05D004184 2.1e-33 147.1 207 47.8
DCAR_006915 Daucus carota HOM05D001826 ORTHO05D004184 2.8e-33 146.7 201 48.8
Gohir.D12G108900 Gossypium hirsutum HOM05D001826 ORTHO05D004184 3.6e-33 146.4 203 49.8
Potri.002G157200 Populus trichocarpa HOM05D001826 ORTHO05D004184 3.6e-33 146.4 213 46.5
PGR042G0308 Punica granatum HOM05D001826 ORTHO05D004184 3.6e-33 146.4 203 49.3
Actinidia20930 Actinidia chinensis HOM05D001826 ORTHO05D004184 4.8e-33 146.0 284 40.8
CiPaw.02G028500 Carya illinoinensis HOM05D001826 ORTHO05D004184 4.8e-33 146.0 257 43.2
MSTRG.4866 Avicennia marina HOM05D001826 ORTHO05D004184 8.1e-33 145.2 215 44.7
Ciclev10018563m.g Citrus clementina HOM05D001826 ORTHO05D004184 8.1e-33 145.2 205 47.8
Solyc01g094290.3 Solanum lycopersicum HOM05D001826 ORTHO05D004184 8.1e-33 145.2 180 52.8
Sopen01g038090 Solanum pennellii HOM05D001826 ORTHO05D004184 8.1e-33 145.2 180 52.8
RcHm_v2.0_Chr1g0353741 Rosa chinensis HOM05D001826 ORTHO05D004184 1.1e-32 144.8 300 39.0
Lj7A516T61 Lonicera japonica HOM05D001826 ORTHO05D004184 1.4e-32 144.4 225 42.7
Peaxi162Scf00397g00111 Petunia axillaris HOM05D001826 ORTHO05D004184 1.4e-32 144.4 148 56.8
THA.LOC104801451 Tarenaya hassleriana HOM05D001826 ORTHO05D004184 1.4e-32 144.4 192 49.5
Oeu004525.1 Olea europaea HOM05D001826 ORTHO05D004184 1.8e-32 144.1 204 48.5
Aqoxy5G04023 Aquilegia oxysepala HOM05D001826 ORTHO05D004184 3.1e-32 143.3 274 40.5
Ca_07891_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 3.1e-32 143.3 268 39.2
Sabra02G0124800 Salix brachista HOM05D001826 ORTHO05D004184 3.1e-32 143.3 244 41.8
COL.COLO4_12675 Corchorus olitorius HOM05D001826 ORTHO05D004184 4.0e-32 142.9 247 42.1
CANSAT56G1923 Cannabis sativa HOM05D001826 ORTHO05D004184 5.3e-32 142.5 272 40.1
Glyma.09G262000 Glycine max HOM05D001826 ORTHO05D004184 6.9e-32 142.1 235 43.8
Lsat_1_v5_gn_7_5161 Lactuca sativa HOM05D001826 ORTHO05D004184 6.9e-32 142.1 203 47.8
RhsimUnG0002100 Rhododendron simsii HOM05D001826 ORTHO05D004184 9.0e-32 141.7 212 45.8
Ah.05g176450 Amaranthus hybridus HOM05D001826 ORTHO05D004184 1.2e-31 141.4 275 38.9
Carub.0006s3656 Capsella rubella HOM05D001826 ORTHO05D004184 1.2e-31 141.4 196 49.0
Duzib138G1216 Durio zibethinus HOM05D001826 ORTHO05D004184 1.2e-31 141.4 200 48.0
ECA240G3725 Erigeron canadensis HOM05D001826 ORTHO05D004184 1.2e-31 141.4 205 46.3
PSO782G0182 Papaver somniferum HOM05D001826 ORTHO05D004184 1.5e-31 141.0 219 45.7
Sed0005198 Sechium edule HOM05D001826 ORTHO05D004184 1.5e-31 141.0 199 47.2
PSO063G0747 Papaver somniferum HOM05D001826 ORTHO05D004184 2.0e-31 140.6 206 48.1
arahy.Tifrunner.gnm1.ann1.SLD8LW Arachis hypogaea HOM05D001826 ORTHO05D004184 2.6e-31 140.2 205 46.3
EL10Ac1g00529 Beta vulgaris HOM05D001826 ORTHO05D004184 3.4e-31 139.8 206 46.1
Oeu014675.3 Olea europaea HOM05D001826 ORTHO05D004184 3.4e-31 139.8 202 48.5
Lsat_1_v5_gn_3_136621 Lactuca sativa HOM05D001826 ORTHO05D004184 4.5e-31 139.4 232 44.0
Lj9C580G11 Lonicera japonica HOM05D001826 ORTHO05D004184 4.5e-31 139.4 226 46.5
AT4G00630 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 7.6e-31 138.7 201 48.3
Aa31LG5G380 Aethionema arabicum HOM05D001826 ORTHO05D004184 9.9e-31 138.3 198 48.0
Manes.05G037400 Manihot esculenta HOM05D001826 ORTHO05D004184 9.9e-31 138.3 217 46.1
Lalb_Chr19g0127041 Lupinus albus HOM05D001826 ORTHO05D004184 1.3e-30 137.9 233 43.8
Sc18g0003430 Simmondsia chinensis HOM05D001826 ORTHO05D004184 1.7e-30 137.5 212 45.3
TWI23G0863 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 2.2e-30 137.1 205 46.3
arahy.Tifrunner.gnm1.ann1.8F4Z70 Arachis hypogaea HOM05D001826 ORTHO05D004184 3.8e-30 136.3 203 45.8
CARHR248780 Cardamine hirsuta HOM05D001826 ORTHO05D004184 8.4e-30 135.2 195 46.2
arahy.Tifrunner.gnm1.ann1.253UZ6 Arachis hypogaea HOM05D001826 ORTHO05D004184 1.1e-29 134.8 210 43.8
arahy.Tifrunner.gnm1.ann1.42EX8Y Arachis hypogaea HOM05D001826 ORTHO05D004184 1.1e-29 134.8 210 43.8
TWI59G0720 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 1.1e-29 134.8 278 38.8
TWI59G1454 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 1.1e-29 134.8 278 38.8
SGA_v2.0_scaffold277G46674 Striga asiatica HOM05D001826 ORTHO05D004184 1.4e-29 134.4 272 36.4
AUR62004319 Chenopodium quinoa HOM05D001826 ORTHO05D004184 1.9e-29 134.0 206 46.1
ECA236G3271 Erigeron canadensis HOM05D001826 ORTHO05D004184 1.9e-29 134.0 202 44.1
vmacro13307 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.9e-29 134.0 288 37.2
Lj3g0020333 Lotus japonicus HOM05D001826 ORTHO05D004184 2.4e-29 133.7 232 40.9
TPR.G4440 Trifolium pratense HOM05D001826 ORTHO05D004184 3.2e-29 133.3 224 42.9
BcaB03g13614 Brassica carinata HOM05D001826 ORTHO05D018157 4.2e-29 132.9 165 53.3
DCAR_015945 Daucus carota HOM05D001826 ORTHO05D004184 7.1e-29 132.1 206 45.1
SalBow3G1103 Salvia bowleyana HOM05D001826 ORTHO05D004184 7.1e-29 132.1 269 36.1
SalBow5G0163 Salvia bowleyana HOM05D001826 ORTHO05D004184 7.1e-29 132.1 229 42.4
SalBow5G2532 Salvia bowleyana HOM05D001826 ORTHO05D004184 7.1e-29 132.1 229 42.4
DCAR_025143 Daucus carota HOM05D001826 ORTHO05D004184 1.6e-28 131.0 202 46.0
Dinv32450 Davidia involucrata HOM05D001826 ORTHO05D018157 2.1e-28 130.6 136 55.9
Hund16940 Selenicereus undatus HOM05D001826 ORTHO05D004184 2.1e-28 130.6 204 42.2
HanXRQChr04g0121631 Helianthus annuus HOM05D001826 ORTHO05D004184 2.7e-28 130.2 266 37.2
Glyma.03G014000 Glycine max HOM05D001826 ORTHO05D004184 6.0e-28 129.0 210 42.9
Hma1.2p1_0001F.1_g001660 Hydrangea macrophylla HOM05D001826 ORTHO05D004184 6.0e-28 129.0 202 44.6
Phvul.010G095600 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 7.9e-28 128.6 172 48.3
Duzib133G0016 Durio zibethinus HOM05D001826 ORTHO05D004184 1.0e-27 128.3 203 45.8
Medtr8g031550 Medicago truncatula HOM05D001826 ORTHO05D004184 1.0e-27 128.3 220 40.9
Phvul.010G095800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 1.0e-27 128.3 172 47.7
FAN10G2518 Fragaria x ananassa HOM05D001826 ORTHO05D018157 1.3e-27 127.9 181 45.3
Psat3g110880 Pisum sativum HOM05D001826 ORTHO05D004184 1.3e-27 127.9 228 41.7
AL1G10550 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 1.8e-27 127.5 204 45.6
HanXRQChr03g0093471 Helianthus annuus HOM05D001826 ORTHO05D004184 2.3e-27 127.1 202 43.6
Hund27301 Selenicereus undatus HOM05D001826 ORTHO05D004184 2.3e-27 127.1 305 34.8
Glyma.18G230100 Glycine max HOM05D001826 ORTHO05D004184 3.9e-27 126.3 171 48.5
Lj1g0018622 Lotus japonicus HOM05D001826 ORTHO05D004184 3.9e-27 126.3 199 45.2
Lalb_Chr10g0097211 Lupinus albus HOM05D001826 ORTHO05D004184 3.9e-27 126.3 204 44.6
TPR.G37729 Trifolium pratense HOM05D001826 ORTHO05D004184 3.9e-27 126.3 231 40.7
Ca_23666_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 6.7e-27 125.6 241 40.2
HanXRQChr06g0169881 Helianthus annuus HOM05D001826 ORTHO05D004184 6.7e-27 125.6 228 38.6
HanXRQChr13g0426341 Helianthus annuus HOM05D001826 ORTHO05D004184 8.7e-27 125.2 211 42.2
Psat4g153760 Pisum sativum HOM05D001826 ORTHO05D004184 8.7e-27 125.2 274 38.3
AT1G01790 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 1.1e-26 124.8 208 45.2
Zm00001eb433980 Zea mays HOM05D001826 ORTHO05D004184 1.1e-26 124.8 200 43.5
Sp1g00500 Schrenkiella parvula HOM05D001826 ORTHO05D004184 1.5e-26 124.4 225 43.6
Migut.B01724 Erythranthe guttata HOM05D001826 ORTHO05D004184 3.3e-26 123.2 163 49.1
A10p00260 Brassica napus HOM05D001826 ORTHO05D004184 5.6e-26 122.5 167 47.3
AUR62033325 Chenopodium quinoa HOM05D001826 ORTHO05D004184 5.6e-26 122.5 194 44.8
Thhalv10006607m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 7.4e-26 122.1 203 44.3
Zm00001eb065780 Zea mays HOM05D001826 ORTHO05D004184 1.3e-25 121.3 200 44.5
Aa31LG1G11160 Aethionema arabicum HOM05D001826 ORTHO05D004184 1.6e-25 120.9 271 37.3
VMungo0331G1572 Vigna mungo HOM05D001826 ORTHO05D004184 1.6e-25 120.9 165 47.3
Glyma.07G073700 Glycine max HOM05D001826 ORTHO05D004184 2.8e-25 120.2 175 45.1
AUR62033334 Chenopodium quinoa HOM05D001826 ORTHO05D004184 3.7e-25 119.8 191 44.5
Cc02_g37680 Coffea canephora HOM05D001826 ORTHO05D004184 8.1e-25 118.6 190 43.7
Actinidia12714 Actinidia chinensis HOM05D001826 ORTHO05D004184 1.4e-24 117.9 113 59.3
C05p00260 Brassica napus HOM05D001826 ORTHO05D004184 2.4e-24 117.1 160 47.5
BolC5t28815H Brassica oleracea HOM05D001826 ORTHO05D004184 2.4e-24 117.1 160 47.5
CSS0034842 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 2.4e-24 117.1 203 43.3
DCAR_008601 Daucus carota HOM05D001826 ORTHO05D004184 2.4e-24 117.1 193 44.0
Sp1g00490 Schrenkiella parvula HOM05D001826 ORTHO05D004184 2.4e-24 117.1 154 50.0
BraA10t42302Z Brassica rapa HOM05D001826 ORTHO05D004184 4.0e-24 116.3 167 47.3
Thhalv10006595m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 5.3e-24 115.9 231 41.1
Gohir.A08G130000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 5.3e-24 115.9 202 42.1
BcaB03g13615 Brassica carinata HOM05D001826 ORTHO05D004184 1.2e-23 114.8 112 59.8
C05p00270 Brassica napus HOM05D001826 ORTHO05D004184 1.2e-23 114.8 112 59.8
BolC5t28817H Brassica oleracea HOM05D001826 ORTHO05D004184 1.2e-23 114.8 112 59.8
CARHR000530 Cardamine hirsuta HOM05D001826 ORTHO05D004184 1.2e-23 114.8 110 60.9
Gorai.001G170200 Gossypium raimondii HOM05D001826 ORTHO05D004184 1.5e-23 114.4 192 42.2
BraA09t42264Z Brassica rapa HOM05D001826 ORTHO05D004184 2.0e-23 114.0 204 42.6
Gohir.D08G151300 Gossypium hirsutum HOM05D001826 ORTHO05D004184 2.6e-23 113.6 197 42.1
MSTRG.20812 Avicennia marina HOM05D001826 ORTHO05D004184 4.5e-23 112.8 287 33.8
C08p53870 Brassica napus HOM05D001826 ORTHO05D004184 4.5e-23 112.8 157 49.0
BolC8t52901H Brassica oleracea HOM05D001826 ORTHO05D004184 4.5e-23 112.8 157 49.0
BcaB03g13616 Brassica carinata HOM05D001826 ORTHO05D004184 5.8e-23 112.5 166 47.0
A10p00230 Brassica napus HOM05D001826 ORTHO05D004184 7.6e-23 112.1 174 43.7
Carub.0001s0042 Capsella rubella HOM05D001826 ORTHO05D004184 1.3e-22 111.3 135 52.6
ATR0680G345 Amborella trichopoda HOM05D001826 ORTHO05D004184 1.7e-22 110.9 159 48.4
Gorai.004G157200 Gossypium raimondii HOM05D001826 ORTHO05D004184 1.9e-21 107.5 197 41.1
Atru.chr10.2376 Acer truncatum HOM05D001826 ORTHO05D018157 2.5e-21 107.1 138 51.4
unitig_8.g3808 Utricularia gibba HOM05D001826 ORTHO05D004184 5.5e-21 105.9 154 41.6
vmacro13312 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 2.7e-20 103.6 143 49.0
Phvul.008G067800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 1.8e-19 100.9 156 44.9
FAN10G2366 Fragaria x ananassa HOM05D001826 ORTHO05D018157 3.2e-13 80.1 212 32.1
Nn1g01434 Nelumbo nucifera HOM05D001826 ORTHO05D018157 5.7e-10 69.3 258 32.2
Carub.0006s3629 Capsella rubella HOM05D001826 ORTHO05D114377 2.9e-06 57.0 146 36.3


User provided reference genes

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