Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1005 Ceratophyllum demersum HOM05D000147 ORTHO05D006488 3.1e-75 285.0 142 100.0
CDE02G3853 Ceratophyllum demersum HOM05D000147 ORTHO05D006488 5.5e-56 221.1 132 84.8
Nn4g26572 Nelumbo nucifera HOM05D000147 ORTHO05D006488 2.1e-15 86.3 109 45.0
Hma1.2p1_0020F.1_g013930 Hydrangea macrophylla HOM05D000147 ORTHO05D006488 1.5e-13 80.1 104 44.2
CDE02G1490 Ceratophyllum demersum HOM05D000147 ORTHO05D006488 3.4e-13 79.0 114 45.6
Cc00_g07790 Coffea canephora HOM05D000147 ORTHO05D006488 3.4e-13 79.0 109 44.0
SGA_v2.0_scaffold106G30653 Striga asiatica HOM05D000147 ORTHO05D006488 4.4e-13 78.6 109 44.0
CiPaw.09G123200 Carya illinoinensis HOM05D000147 ORTHO05D006488 5.7e-13 78.2 107 44.9
Sc17g0004910 Simmondsia chinensis HOM05D000147 ORTHO05D006488 9.8e-13 77.4 105 42.9
Ciclev10015142m.g Citrus clementina HOM05D000147 ORTHO05D006488 1.7e-12 76.6 106 44.3
arahy.Tifrunner.gnm1.ann1.4VL4ZD Arachis hypogaea HOM05D000147 ORTHO05D006488 3.7e-12 75.5 107 45.8
Atru.chr10.1224 Acer truncatum HOM05D000147 ORTHO05D006488 1.1e-11 73.9 105 43.8
SalBow7G2195 Salvia bowleyana HOM05D000147 ORTHO05D006488 1.1e-11 73.9 111 42.3
Actinidia19526 Actinidia chinensis HOM05D000147 ORTHO05D006488 1.4e-11 73.6 112 39.3
arahy.Tifrunner.gnm1.ann1.EJC028 Arachis hypogaea HOM05D000147 ORTHO05D006488 1.4e-11 73.6 107 43.0
CSS0041952 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D006488 1.8e-11 73.2 110 40.9
Cpa.g.sc246.6 Carica papaya HOM05D000147 ORTHO05D006488 2.4e-11 72.8 111 40.5
Lalb_Chr07g0188561 Lupinus albus HOM05D000147 ORTHO05D006488 2.4e-11 72.8 107 41.1
Prupe.4G080800 Prunus persica HOM05D000147 ORTHO05D006488 2.4e-11 72.8 109 39.4
MBI07_g23223_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D006488 3.1e-11 72.4 118 43.2
PSO675G4870 Papaver somniferum HOM05D000147 ORTHO05D006488 3.1e-11 72.4 109 38.5
Phvul.002G193200 Phaseolus vulgaris HOM05D000147 ORTHO05D006488 4.1e-11 72.0 108 44.4
PGR042G2817 Punica granatum HOM05D000147 ORTHO05D006488 4.1e-11 72.0 116 40.5
MSTRG.14775 Avicennia marina HOM05D000147 ORTHO05D006488 7.0e-11 71.2 104 41.3
DCAR_003917 Daucus carota HOM05D000147 ORTHO05D006488 7.0e-11 71.2 112 38.4
FAN11G0707 Fragaria x ananassa HOM05D000147 ORTHO05D006488 7.0e-11 71.2 111 42.3
QL05p057968 Quercus lobata HOM05D000147 ORTHO05D006488 7.0e-11 71.2 108 42.6
Lalb_Chr12g0209001 Lupinus albus HOM05D000147 ORTHO05D006488 9.2e-11 70.9 111 43.2
Peaxi162Scf01211g00129 Petunia axillaris HOM05D000147 ORTHO05D006488 9.2e-11 70.9 106 43.4
ATR0730G154 Amborella trichopoda HOM05D000147 ORTHO05D006488 1.2e-10 70.5 109 39.4
TPR.G2955 Trifolium pratense HOM05D000147 ORTHO05D006488 1.2e-10 70.5 108 39.8
Nitab4.5_0000420g0060 Nicotiana tabacum HOM05D000147 ORTHO05D006488 1.6e-10 70.1 109 40.4
TAR626G1497 Trochodendron aralioides HOM05D000147 ORTHO05D006488 2.0e-10 69.7 113 39.8
Ca_18261_v3 Cicer arietinum L. HOM05D000147 ORTHO05D006488 2.7e-10 69.3 110 39.1
Haze_05607 Corylus avellana HOM05D000147 ORTHO05D006488 2.7e-10 69.3 105 42.9
DCAR_007891 Daucus carota HOM05D000147 ORTHO05D006488 2.7e-10 69.3 110 40.0
Nn3g20781 Nelumbo nucifera HOM05D000147 ORTHO05D006488 2.7e-10 69.3 84 45.2
VMungo0251G2228 Vigna mungo HOM05D000147 ORTHO05D006488 2.7e-10 69.3 108 41.7
Potri.011G085200 Populus trichocarpa HOM05D000147 ORTHO05D006488 3.5e-10 68.9 108 36.1
unitig_8.g4885 Utricularia gibba HOM05D000147 ORTHO05D006488 7.8e-10 67.8 109 36.7
FAN21G2875 Fragaria x ananassa HOM05D000147 ORTHO05D006488 1.0e-09 67.4 110 40.9
FAN25G1494 Fragaria x ananassa HOM05D000147 ORTHO05D006488 1.0e-09 67.4 110 40.9
Medtr4g096870 Medicago truncatula HOM05D000147 ORTHO05D006488 1.0e-09 67.4 104 38.5
Duzib235G0947 Durio zibethinus HOM05D000147 ORTHO05D006488 1.3e-09 67.0 109 39.4
Oeu042448.2 Olea europaea HOM05D000147 ORTHO05D006488 1.3e-09 67.0 105 41.0
Lsat_1_v5_gn_7_28260 Lactuca sativa HOM05D000147 ORTHO05D006488 1.7e-09 66.6 109 40.4
Lj4g0019400 Lotus japonicus HOM05D000147 ORTHO05D006488 1.7e-09 66.6 107 41.1
PGR083G0222 Punica granatum HOM05D000147 ORTHO05D006488 1.7e-09 66.6 108 42.6
Potri.004G065100 Populus trichocarpa HOM05D000147 ORTHO05D006488 2.3e-09 66.2 108 34.3
AUR62030186 Chenopodium quinoa HOM05D000147 ORTHO05D006488 2.9e-09 65.9 123 39.8
Glyma.08G085500 Glycine max HOM05D000147 ORTHO05D006488 2.9e-09 65.9 109 40.4
Lj1C1188T4 Lonicera japonica HOM05D000147 ORTHO05D006488 2.9e-09 65.9 61 50.8
SEGI_10279 Sequoiadendron giganteum HOM05D000147 ORTHO05D006488 2.9e-09 65.9 110 40.0
CiPaw.10G091800 Carya illinoinensis HOM05D000147 ORTHO05D006488 3.8e-09 65.5 109 40.4
Zm00001eb152700 Zea mays HOM05D000147 ORTHO05D006488 3.8e-09 65.5 99 36.4
Cfa000940 Carpinus fangiana HOM05D000147 ORTHO05D006488 5.0e-09 65.1 105 41.9
FAN16G2570 Fragaria x ananassa HOM05D000147 ORTHO05D006488 5.0e-09 65.1 111 39.6
Migut.H01361 Erythranthe guttata HOM05D000147 ORTHO05D006488 6.6e-09 64.7 108 37.0
Gorai.010G166700 Gossypium raimondii HOM05D000147 ORTHO05D006488 1.5e-08 63.5 109 39.4
Zm00001eb360030 Zea mays HOM05D000147 ORTHO05D006488 1.5e-08 63.5 104 41.3
ClCG01G024640 Citrullus lanatus HOM05D000147 ORTHO05D006488 1.9e-08 63.2 112 39.3
Nitab4.5_0006887g0030 Nicotiana tabacum HOM05D000147 ORTHO05D006488 1.9e-08 63.2 138 35.5
HanXRQChr15g0480851 Helianthus annuus HOM05D000147 ORTHO05D006488 2.5e-08 62.8 117 39.3
Lj4g0007418 Lotus japonicus HOM05D000147 ORTHO05D006488 2.5e-08 62.8 106 40.6
Os01g0757400 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D006488 2.5e-08 62.8 99 38.4
ECA236G4896 Erigeron canadensis HOM05D000147 ORTHO05D006488 3.3e-08 62.4 116 40.5
THA.LOC104813343 Tarenaya hassleriana HOM05D000147 ORTHO05D006488 4.3e-08 62.0 102 39.2
Manes.15G121700 Manihot esculenta HOM05D000147 ORTHO05D006488 5.6e-08 61.6 106 37.7
Sed0007783 Sechium edule HOM05D000147 ORTHO05D006488 5.6e-08 61.6 106 39.6
Psat7g089480 Pisum sativum HOM05D000147 ORTHO05D006488 7.3e-08 61.2 107 37.4
Glyma.05G130700 Glycine max HOM05D000147 ORTHO05D006488 9.5e-08 60.8 107 37.4
Oeu040108.1 Olea europaea HOM05D000147 ORTHO05D006488 1.2e-07 60.5 87 41.4
PSO541G4905 Papaver somniferum HOM05D000147 ORTHO05D006488 1.2e-07 60.5 103 35.9
GSVIVG01021470001 Vitis vinifera HOM05D000147 ORTHO05D006488 1.2e-07 60.5 107 41.1
Thecc.06G150400 Theobroma cacao HOM05D000147 ORTHO05D006488 1.6e-07 60.1 109 35.8
Hund21545 Selenicereus undatus HOM05D000147 ORTHO05D006488 2.1e-07 59.7 105 40.0
Nitab4.5_0008303g0010 Nicotiana tabacum HOM05D000147 ORTHO05D006488 3.6e-07 58.9 106 40.6
HPP92_023215 Vanilla planifolia HOM05D000147 ORTHO05D006488 4.7e-07 58.5 88 39.8
CANSAT35G0218 Cannabis sativa HOM05D000147 ORTHO05D006488 6.1e-07 58.2 85 41.2
MD05G1283700 Malus domestica HOM05D000147 ORTHO05D006488 8.0e-07 57.8 78 42.3
Aqoxy1G01702 Aquilegia oxysepala HOM05D000147 ORTHO05D006488 1.0e-06 57.4 111 36.9
TWI09G0852 Tripterygium wilfordii HOM05D000147 ORTHO05D006488 1.0e-06 57.4 104 39.4
TAR629G2297 Trochodendron aralioides HOM05D000147 ORTHO05D006488 1.0e-06 57.4 58 50.0
MD10G1261900 Malus domestica HOM05D000147 ORTHO05D006488 1.8e-06 56.6 77 44.2
COL.COLO4_31070 Corchorus olitorius HOM05D000147 ORTHO05D006488 2.3e-06 56.2 80 41.2
MELO3C007131.2 Cucumis melo HOM05D000147 ORTHO05D006488 2.3e-06 56.2 123 36.6
Nitab4.5_0000869g0030 Nicotiana tabacum HOM05D000147 ORTHO05D006488 4.0e-06 55.5 108 38.0
FvH4_3g05520 Fragaria vesca HOM05D000147 ORTHO05D006488 5.2e-06 55.1 86 41.9
PGSC0003DMG400021168 Solanum tuberosum HOM05D000147 ORTHO05D006488 5.2e-06 55.1 77 48.1
Sopen02g019530 Solanum pennellii HOM05D000147 ORTHO05D006488 8.9e-06 54.3 103 36.9


User provided reference genes

Program Settings