Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0648 Ceratophyllum demersum HOM05D000329 ORTHO05D000833 0.0e+00 1807.7 910 100.0
Nn1g01495 Nelumbo nucifera HOM05D000329 ORTHO05D000833 3.4e-207 726.1 927 42.2
PSO302G0151 Papaver somniferum HOM05D000329 ORTHO05D000833 6.4e-190 668.7 928 39.7
Aqoxy5G04007 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 1.6e-188 664.1 931 39.7
PSO210G7657 Papaver somniferum HOM05D000329 ORTHO05D000833 2.7e-188 663.3 926 39.5
CiPaw.12G093800 Carya illinoinensis HOM05D000329 ORTHO05D000833 3.1e-184 649.8 922 39.7
CSS0031193 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D000833 1.9e-178 630.6 930 37.8
MD06G1081900 Malus domestica HOM05D000329 ORTHO05D000833 3.1e-176 623.2 926 37.4
Ciclev10018462m.g Citrus clementina HOM05D000329 ORTHO05D000833 8.9e-176 621.7 923 37.8
TWI81G0989 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 1.7e-174 617.5 921 37.4
GSVIVG01019761001 Vitis vinifera HOM05D000329 ORTHO05D000833 3.7e-174 616.3 911 39.3
Actinidia02012 Actinidia chinensis HOM05D000329 ORTHO05D000833 4.9e-174 615.9 929 37.6
MD14G1103700 Malus domestica HOM05D000329 ORTHO05D000833 4.9e-174 615.9 930 37.3
ATR0680G104 Amborella trichopoda HOM05D000329 ORTHO05D000833 1.1e-173 614.8 933 39.7
Lj2A191G51 Lonicera japonica HOM05D000329 ORTHO05D000833 2.4e-173 613.6 876 39.8
Manes.01G061050 Manihot esculenta HOM05D000329 ORTHO05D000833 6.0e-172 609.0 920 36.4
Cfa012174 Carpinus fangiana HOM05D000329 ORTHO05D000833 1.0e-171 608.2 881 37.8
Prupe.5G099000 Prunus persica HOM05D000329 ORTHO05D000833 1.7e-171 607.4 932 36.7
Rhsim02G0228800 Rhododendron simsii HOM05D000329 ORTHO05D000833 6.6e-171 605.5 962 36.7
Sabra03G0089600 Salix brachista HOM05D000329 ORTHO05D000833 2.4e-168 597.0 927 37.6
Haze_08848 Corylus avellana HOM05D000329 ORTHO05D000833 8.4e-166 588.6 928 36.3
RcHm_v2.0_Chr7g0197841 Rosa chinensis HOM05D000329 ORTHO05D000833 9.3e-165 585.1 923 35.6
FvH4_5g02310 Fragaria vesca HOM05D000329 ORTHO05D000833 1.7e-163 580.9 921 35.7
Cc08_g14660 Coffea canephora HOM05D000329 ORTHO05D000833 2.5e-162 577.0 828 38.4
Sc01g0009540 Simmondsia chinensis HOM05D000329 ORTHO05D000833 7.3e-162 575.5 928 36.5
AUR62017213 Chenopodium quinoa HOM05D000329 ORTHO05D000833 1.3e-161 574.7 937 34.9
Phvul.002G157500 Phaseolus vulgaris HOM05D000329 ORTHO05D000833 1.3e-161 574.7 927 35.6
Gohir.D08G200900 Gossypium hirsutum HOM05D000329 ORTHO05D000833 4.8e-161 572.8 924 36.7
CsaV3_5G002860 Cucumis sativus L. HOM05D000329 ORTHO05D000833 1.4e-160 571.2 929 35.1
FAN08G1575 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.4e-160 571.2 955 35.0
FAN04G0379 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.4e-160 570.5 928 35.6
Actinidia14555 Actinidia chinensis HOM05D000329 ORTHO05D000833 4.0e-160 569.7 934 36.0
Glyma.11G023700 Glycine max HOM05D000329 ORTHO05D000833 4.0e-160 569.7 928 36.4
Sopen08g029320 Solanum pennellii HOM05D000329 ORTHO05D000833 6.9e-160 568.9 927 36.9
FAN13G2110 Fragaria x ananassa HOM05D000329 ORTHO05D000833 4.5e-159 566.2 928 35.1
COL.COLO4_34455 Corchorus olitorius HOM05D000329 ORTHO05D000833 7.6e-159 565.5 847 36.7
ClCG01G002770 Citrullus lanatus HOM05D000329 ORTHO05D000833 9.9e-159 565.1 929 34.2
AUR62010670 Chenopodium quinoa HOM05D000329 ORTHO05D000833 1.3e-158 564.7 933 34.5
Solyc08g081000.3 Solanum lycopersicum HOM05D000329 ORTHO05D000833 1.3e-158 564.7 927 37.1
Lalb_Chr09g0321021 Lupinus albus HOM05D000329 ORTHO05D000833 2.2e-158 563.9 922 36.6
Gohir.A08G182350 Gossypium hirsutum HOM05D000329 ORTHO05D000833 1.1e-157 561.6 929 36.7
Thecc.03G277900 Theobroma cacao HOM05D000329 ORTHO05D000833 2.4e-157 560.5 932 35.2
FAN18G0976 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.2e-157 560.1 921 35.3
Glyma.01G219800 Glycine max HOM05D000329 ORTHO05D000833 3.2e-157 560.1 929 36.2
Nitab4.5_0003441g0110 Nicotiana tabacum HOM05D000329 ORTHO05D000833 5.4e-157 559.3 931 36.6
MBI17_g28345_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D000833 7.1e-157 558.9 937 36.6
CAN.G774.26 Capsicum annuum HOM05D000329 ORTHO05D000833 1.6e-156 557.8 932 35.5
Sed0005725 Sechium edule HOM05D000329 ORTHO05D000833 2.1e-156 557.4 834 36.0
Gorai.004G211700 Gossypium raimondii HOM05D000329 ORTHO05D000833 2.7e-156 557.0 955 35.7
Psat2g182320 Pisum sativum HOM05D000329 ORTHO05D000833 6.0e-156 555.8 925 36.3
Duzib068G0085 Durio zibethinus HOM05D000329 ORTHO05D000833 1.7e-155 554.3 922 35.4
HanXRQChr17g0533711 Helianthus annuus HOM05D000329 ORTHO05D000833 1.7e-155 554.3 930 35.8
TPR.G6625 Trifolium pratense HOM05D000329 ORTHO05D000833 2.3e-155 553.9 926 35.4
THA.LOC104818027 Tarenaya hassleriana HOM05D000329 ORTHO05D000833 5.1e-155 552.7 880 36.0
VMungo1215G1167 Vigna mungo HOM05D000329 ORTHO05D000833 8.7e-155 552.0 925 35.1
arahy.Tifrunner.gnm1.ann1.AJP7R9 Arachis hypogaea HOM05D000329 ORTHO05D000833 4.3e-154 549.7 966 34.9
arahy.Tifrunner.gnm1.ann1.6V6FMV Arachis hypogaea HOM05D000329 ORTHO05D000833 1.6e-153 547.7 964 35.1
Medtr5g010300 Medicago truncatula HOM05D000329 ORTHO05D000833 1.6e-153 547.7 920 35.4
EL10Ac5g13077 Beta vulgaris HOM05D000329 ORTHO05D000833 3.6e-153 546.6 932 34.4
LjContig00312_ERROPOS870357g0009147 Lotus japonicus HOM05D000329 ORTHO05D000833 1.4e-152 544.7 918 35.0
Eucgr.D01851 Eucalyptus grandis HOM05D000329 ORTHO05D000833 2.4e-152 543.9 857 35.7
ECA246G1250 Erigeron canadensis HOM05D000329 ORTHO05D000833 5.3e-152 542.7 856 36.1
Migut.E01096 Erythranthe guttata HOM05D000329 ORTHO05D000833 9.0e-152 542.0 926 36.3
DCAR_006743 Daucus carota HOM05D000329 ORTHO05D000833 2.6e-151 540.4 926 36.3
Peaxi162Scf00119g00838 Petunia axillaris HOM05D000329 ORTHO05D000833 3.2e-149 533.5 916 35.9
MSTRG.13841 Avicennia marina HOM05D000329 ORTHO05D000833 1.3e-147 528.1 932 34.7
Oeu009171.4 Olea europaea HOM05D000329 ORTHO05D000833 7.6e-143 512.3 958 34.9
PGR031G0355 Punica granatum HOM05D000329 ORTHO05D000833 3.5e-140 503.4 925 32.6
Hund14803 Selenicereus undatus HOM05D000329 ORTHO05D000833 3.5e-140 503.4 931 33.4
Zm00001eb229050 Zea mays HOM05D000329 ORTHO05D000833 3.1e-136 490.3 856 35.3
Atru.chr9.2249 Acer truncatum HOM05D000329 ORTHO05D000833 2.2e-134 484.2 724 38.5
Lsat_1_v5_gn_3_7360 Lactuca sativa HOM05D000329 ORTHO05D000833 4.6e-132 476.5 806 35.2
Dinv38948 Davidia involucrata HOM05D000329 ORTHO05D000833 2.3e-131 474.2 670 39.0
vmacro11324 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 5.7e-130 469.5 769 35.9
SEGI_23393 Sequoiadendron giganteum HOM05D000329 ORTHO05D000833 1.8e-128 464.5 869 31.6
TAR636G0974 Trochodendron aralioides HOM05D000329 ORTHO05D000833 5.5e-125 453.0 479 48.9
MELO3C005670.2 Cucumis melo HOM05D000329 ORTHO05D000833 2.7e-124 450.7 963 30.4
Ca_24553_v3 Cicer arietinum L. HOM05D000329 ORTHO05D000833 7.0e-112 409.5 958 31.5
SGA_v2.0_scaffold144G35947 Striga asiatica HOM05D000329 ORTHO05D000833 7.0e-112 409.5 761 33.8
Ah.12g057000 Amaranthus hybridus HOM05D000329 ORTHO05D000833 5.9e-111 406.4 1028 28.5
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 1.2e-106 392.1 1506 23.2
Potri.003G126600 Populus trichocarpa HOM05D000329 ORTHO05D000833 1.5e-106 391.7 544 38.6
QL12p034051 Quercus lobata HOM05D000329 ORTHO05D000833 1.2e-98 365.5 579 36.1
Atru.chr9.2239 Acer truncatum HOM05D000329 ORTHO05D000833 8.8e-91 339.3 504 38.7
TAR636G0175 Trochodendron aralioides HOM05D000329 ORTHO05D000833 9.8e-90 335.9 414 44.0
Nitab4.5_0010612g0010 Nicotiana tabacum HOM05D000329 ORTHO05D000833 2.0e-79 301.6 496 35.9
AagrBONN_evm.TU.Sc2ySwM_228.1951 Anthoceros agrestis HOM05D000329 ORTHO05D000833 6.8e-67 260.0 914 25.3
PGSC0003DMG400012211 Solanum tuberosum HOM05D000329 ORTHO05D000833 1.7e-65 255.4 455 33.8
Mapoly0030s0125 Marchantia polymorpha HOM05D000329 ORTHO05D000833 5.4e-64 250.4 850 24.8
Thhalv10023217m.g Eutrema salsugineum HOM05D000329 ORTHO05D000833 1.6e-63 248.8 424 34.0
QL12p034092 Quercus lobata HOM05D000329 ORTHO05D000833 1.1e-61 242.7 404 34.7
AT1G63490 Arabidopsis thaliana HOM05D000329 ORTHO05D000833 1.9e-61 241.9 428 32.5
AL2G11730 Arabidopsis lyrata HOM05D000329 ORTHO05D000833 8.1e-60 236.5 424 32.5
Carub.0002s0137 Capsella rubella HOM05D000329 ORTHO05D000833 1.8e-59 235.3 432 32.9
CARHR047880 Cardamine hirsuta HOM05D000329 ORTHO05D000833 1.2e-58 232.6 424 33.5
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 5.8e-58 230.3 331 39.0
C09p16350 Brassica napus HOM05D000329 ORTHO05D000833 2.2e-57 228.4 350 36.6
A09p13680 Brassica napus HOM05D000329 ORTHO05D000833 6.4e-57 226.9 425 32.9
BraA09t37021Z Brassica rapa HOM05D000329 ORTHO05D000833 6.4e-57 226.9 425 32.9
BolC9t54546H Brassica oleracea HOM05D000329 ORTHO05D000833 3.2e-56 224.6 354 36.4
Aa31LG2G810 Aethionema arabicum HOM05D000329 ORTHO05D000833 1.2e-55 222.6 409 32.8
TAR636G3626 Trochodendron aralioides HOM05D000329 ORTHO05D000833 2.6e-42 178.3 324 35.5
Cpa.g.sc74.30 Carica papaya HOM05D000003 ORTHO05D000006 1.0e-38 166.4 233 39.1
Sp2g01130 Schrenkiella parvula HOM05D000329 ORTHO05D000833 1.1e-37 162.9 215 39.1
QL12p033457 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-36 159.5 309 32.7
DCAR_017358 Daucus carota HOM05D000329 ORTHO05D000833 2.8e-36 158.3 211 41.2
QL12p033282 Quercus lobata HOM05D000005 ORTHO05D000012 6.7e-22 110.5 221 30.3
HanXRQChr10g0304271 Helianthus annuus HOM05D000329 ORTHO05D000833 3.7e-20 104.8 190 33.7
Cpa.g.sc74.31 Carica papaya HOM05D000329 ORTHO05D000833 6.3e-20 104.0 118 43.2
PRCOL_00007006 Prasinoderma coloniale HOM05D000329 ORTHO05D000833 5.1e-14 84.3 322 23.0
Cpa.g.sc74.24 Carica papaya HOM05D000329 ORTHO05D000833 5.7e-13 80.9 152 34.2
Cre12.g514250 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D000833 2.4e-11 75.5 344 19.8
QL12p033493 Quercus lobata HOM05D000005 ORTHO05D000012 7.7e-10 70.5 100 35.0
MCO16G013 Micromonas commoda HOM05D000329 ORTHO05D000833 1.0e-09 70.1 101 34.7
Os06g0731600 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D000833 1.7e-09 69.3 96 35.4
QL12p033333 Quercus lobata HOM05D000329 ORTHO05D000833 4.2e-08 64.7 127 34.6
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.0e-06 58.5 104 38.5


User provided reference genes

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