Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0498 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 8.7e-123 443.7 238 100.0
CDE02G0824 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 3.5e-87 325.5 268 70.9
Nn3g21006 Nelumbo nucifera HOM05D005699 ORTHO05D007496 1.6e-55 220.3 303 44.2
TAR629G2232 Trochodendron aralioides HOM05D005699 ORTHO05D007496 6.0e-55 218.4 310 44.2
MBI06_g08519_MAGBIO Magnolia biondii HOM05D005699 ORTHO05D007496 6.6e-54 214.9 281 47.3
PSO541G1284 Papaver somniferum HOM05D005699 ORTHO05D007496 6.6e-54 214.9 282 45.7
Prupe.4G156800 Prunus persica HOM05D005699 ORTHO05D007496 2.5e-53 213.0 277 46.9
Cc05_g10740 Coffea canephora HOM05D005699 ORTHO05D007496 4.7e-52 208.8 258 48.8
PGR083G0120 Punica granatum HOM05D005699 ORTHO05D007496 4.7e-52 208.8 281 46.3
Oeu010029.1 Olea europaea HOM05D005699 ORTHO05D007496 6.2e-52 208.4 268 46.6
AL2G39020 Arabidopsis lyrata HOM05D005699 ORTHO05D007496 8.0e-52 208.0 256 46.5
Migut.M00694 Erythranthe guttata HOM05D005699 ORTHO05D007496 8.0e-52 208.0 286 43.0
Sp5g33710 Schrenkiella parvula HOM05D005699 ORTHO05D007496 8.0e-52 208.0 325 41.2
COL.COLO4_17478 Corchorus olitorius HOM05D005699 ORTHO05D007496 1.4e-51 207.2 254 47.6
AT1G78620 Arabidopsis thaliana HOM05D005699 ORTHO05D007496 1.8e-51 206.8 308 41.9
Dinv13365 Davidia involucrata HOM05D005699 ORTHO05D007496 1.8e-51 206.8 256 47.7
MD11G1269700 Malus domestica HOM05D005699 ORTHO05D007496 1.8e-51 206.8 268 45.9
A07p43890 Brassica napus HOM05D005699 ORTHO05D007496 2.3e-51 206.5 256 45.7
BraA07t31896Z Brassica rapa HOM05D005699 ORTHO05D007496 2.3e-51 206.5 256 45.7
Sed0019309 Sechium edule HOM05D005699 ORTHO05D007496 2.3e-51 206.5 324 41.7
BcaC08g47425 Brassica carinata HOM05D005699 ORTHO05D007496 3.1e-51 206.1 256 45.7
Ciclev10021126m.g Citrus clementina HOM05D005699 ORTHO05D007496 4.0e-51 205.7 327 41.9
SalBow7G3647 Salvia bowleyana HOM05D005699 ORTHO05D007496 4.0e-51 205.7 268 46.6
Carub.0002s2547 Capsella rubella HOM05D005699 ORTHO05D007496 5.2e-51 205.3 256 45.7
Nitab4.5_0000347g0060 Nicotiana tabacum HOM05D005699 ORTHO05D007496 5.2e-51 205.3 256 47.3
Thecc.07G132200 Theobroma cacao HOM05D005699 ORTHO05D007496 5.2e-51 205.3 310 42.6
Sabra11G0080500 Salix brachista HOM05D005699 ORTHO05D007496 6.8e-51 204.9 256 46.9
BcaC08g47427 Brassica carinata HOM05D005699 ORTHO05D007496 8.9e-51 204.5 319 41.1
C06p52520 Brassica napus HOM05D005699 ORTHO05D007496 8.9e-51 204.5 256 45.3
CSS0029451 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 8.9e-51 204.5 252 48.4
Potri.011G105700 Populus trichocarpa HOM05D005699 ORTHO05D007496 8.9e-51 204.5 310 42.3
THA.LOC104813995 Tarenaya hassleriana HOM05D005699 ORTHO05D007496 8.9e-51 204.5 265 45.3
MD03G1247900 Malus domestica HOM05D005699 ORTHO05D007496 1.2e-50 204.1 270 44.4
Thhalv10018838m.g Eutrema salsugineum HOM05D005699 ORTHO05D007496 1.5e-50 203.8 256 45.3
Aqoxy1G01911 Aquilegia oxysepala HOM05D005699 ORTHO05D007496 2.0e-50 203.4 304 43.1
Hma1.2p1_0050F.1_g028850 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 2.0e-50 203.4 256 47.7
CSS0007542 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 3.4e-50 202.6 253 47.4
Manes.15G097700 Manihot esculenta HOM05D005699 ORTHO05D007496 3.4e-50 202.6 311 40.2
BolC6t40271H Brassica oleracea HOM05D005699 ORTHO05D007496 4.4e-50 202.2 266 44.0
CAN.G375.48 Capsicum annuum HOM05D005699 ORTHO05D007496 4.4e-50 202.2 308 41.6
HanXRQChr13g0389711 Helianthus annuus HOM05D005699 ORTHO05D007496 4.4e-50 202.2 258 46.9
Peaxi162Scf00111g01334 Petunia axillaris HOM05D005699 ORTHO05D007496 4.4e-50 202.2 257 47.5
Potri.001G384300 Populus trichocarpa HOM05D005699 ORTHO05D007496 4.4e-50 202.2 255 47.1
Aa31LG4G2340 Aethionema arabicum HOM05D005699 ORTHO05D007496 5.8e-50 201.8 256 44.9
CARHR072140 Cardamine hirsuta HOM05D005699 ORTHO05D007496 7.5e-50 201.4 328 39.9
HanXRQChr14g0439361 Helianthus annuus HOM05D005699 ORTHO05D007496 9.8e-50 201.1 255 47.5
Rhsim06G0211500 Rhododendron simsii HOM05D005699 ORTHO05D007496 9.8e-50 201.1 249 47.8
RcHm_v2.0_Chr5g0029561 Rosa chinensis HOM05D005699 ORTHO05D007496 1.3e-49 200.7 323 42.1
ECA240G3195 Erigeron canadensis HOM05D005699 ORTHO05D007496 1.7e-49 200.3 256 46.9
MSTRG.6687 Avicennia marina HOM05D005699 ORTHO05D007496 2.2e-49 199.9 267 44.2
Solyc07g062180.4 Solanum lycopersicum HOM05D005699 ORTHO05D007496 2.2e-49 199.9 256 45.7
Eucgr.F01366 Eucalyptus grandis HOM05D005699 ORTHO05D007496 3.7e-49 199.1 271 43.5
SGA_v2.0_scaffold73G24389 Striga asiatica HOM05D005699 ORTHO05D007496 3.7e-49 199.1 343 39.7
EL10Ac4g08415 Beta vulgaris HOM05D005699 ORTHO05D007496 4.9e-49 198.7 280 43.9
Cpa.g.sc77.58 Carica papaya HOM05D005699 ORTHO05D007496 1.1e-48 197.6 311 40.5
TWI39G0441 Tripterygium wilfordii HOM05D005699 ORTHO05D007496 1.1e-48 197.6 317 40.1
Phvul.005G076800 Phaseolus vulgaris HOM05D005699 ORTHO05D007496 3.2e-48 196.1 307 40.7
Lj1A824T64 Lonicera japonica HOM05D005699 ORTHO05D007496 5.4e-48 195.3 258 46.5
Lj3g0018973 Lotus japonicus HOM05D005699 ORTHO05D007496 5.4e-48 195.3 270 44.8
arahy.Tifrunner.gnm1.ann1.EKI9R8 Arachis hypogaea HOM05D005699 ORTHO05D007496 7.0e-48 194.9 332 38.0
CsaV3_4G008250 Cucumis sativus L. HOM05D005699 ORTHO05D007496 7.0e-48 194.9 311 41.5
Cfa019514 Carpinus fangiana HOM05D005699 ORTHO05D007496 9.2e-48 194.5 263 44.9
CiPaw.12G110500 Carya illinoinensis HOM05D005699 ORTHO05D007496 9.2e-48 194.5 277 42.6
Glyma.12G233800 Glycine max HOM05D005699 ORTHO05D007496 9.2e-48 194.5 260 45.0
Atru.chr2.2008 Acer truncatum HOM05D005699 ORTHO05D007496 1.2e-47 194.1 252 46.4
VMungo1080G0954 Vigna mungo HOM05D005699 ORTHO05D007496 1.6e-47 193.7 314 40.4
FAN21G2533 Fragaria x ananassa HOM05D005699 ORTHO05D007496 2.1e-47 193.4 261 44.8
Gohir.A11G289100 Gossypium hirsutum HOM05D005699 ORTHO05D007496 2.1e-47 193.4 260 43.1
Gohir.D11G303400 Gossypium hirsutum HOM05D005699 ORTHO05D007496 2.1e-47 193.4 260 43.1
Actinidia12601 Actinidia chinensis HOM05D005699 ORTHO05D007496 4.6e-47 192.2 247 46.2
FAN25G0494 Fragaria x ananassa HOM05D005699 ORTHO05D007496 4.6e-47 192.2 323 39.0
Gorai.007G331300 Gossypium raimondii HOM05D005699 ORTHO05D007496 4.6e-47 192.2 260 42.7
DCAR_013779 Daucus carota HOM05D005699 ORTHO05D007496 6.0e-47 191.8 326 41.1
Glyma.13G265200 Glycine max HOM05D005699 ORTHO05D007496 7.8e-47 191.4 317 39.7
Lalb_Chr20g0109131 Lupinus albus HOM05D005699 ORTHO05D007496 7.8e-47 191.4 313 42.5
CSS0028539 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 1.0e-46 191.0 272 43.8
DCAR_019613 Daucus carota HOM05D005699 ORTHO05D007496 1.3e-46 190.7 256 45.3
FAN11G1539 Fragaria x ananassa HOM05D005699 ORTHO05D007496 1.7e-46 190.3 326 38.7
FAN16G3421 Fragaria x ananassa HOM05D005699 ORTHO05D007496 1.7e-46 190.3 261 44.4
Lj8A146G72 Lonicera japonica HOM05D005699 ORTHO05D007496 3.0e-46 189.5 255 44.3
Ah.04g164050 Amaranthus hybridus HOM05D005699 ORTHO05D007496 3.9e-46 189.1 323 38.7
Nitab4.5_0003230g0020 Nicotiana tabacum HOM05D005699 ORTHO05D007496 5.1e-46 188.7 365 37.0
Psat5g233280 Pisum sativum HOM05D005699 ORTHO05D007496 6.6e-46 188.3 262 42.7
GSVIVG01014100001 Vitis vinifera HOM05D005699 ORTHO05D007496 6.6e-46 188.3 271 42.8
Ca_03931_v3 Cicer arietinum L. HOM05D005699 ORTHO05D007496 1.5e-45 187.2 304 41.1
Haze_09244 Corylus avellana HOM05D005699 ORTHO05D007496 5.6e-45 185.3 277 41.9
AUR62019646 Chenopodium quinoa HOM05D005699 ORTHO05D007496 1.2e-44 184.1 285 41.1
AUR62039586 Chenopodium quinoa HOM05D005699 ORTHO05D007496 2.8e-44 183.0 285 40.4
Medtr2g073380 Medicago truncatula HOM05D005699 ORTHO05D007496 3.6e-44 182.6 304 38.8
PGSC0003DMG400007091 Solanum tuberosum HOM05D005699 ORTHO05D007496 8.9e-43 177.9 315 37.1
Os01g0729100 Oryza sativa ssp. japonica HOM05D005699 ORTHO05D007496 1.5e-42 177.2 322 38.5
MSTRG.14252 Avicennia marina HOM05D005699 ORTHO05D007496 2.6e-42 176.4 256 43.0
ClCG07G010100 Citrullus lanatus HOM05D005699 ORTHO05D007496 2.6e-42 176.4 319 37.9
unitig_37.g12557 Utricularia gibba HOM05D005699 ORTHO05D007496 5.4e-40 168.7 255 40.8
Sabra11G0074900 Salix brachista HOM05D005699 ORTHO05D007496 9.2e-40 167.9 231 43.7
ATR0213G027 Amborella trichopoda HOM05D005699 ORTHO05D007496 2.1e-39 166.8 252 42.5
unitig_746.g26834 Utricularia gibba HOM05D005699 ORTHO05D007496 3.5e-39 166.0 255 39.6
Lsat_1_v5_gn_9_100441 Lactuca sativa HOM05D005699 ORTHO05D007496 5.6e-37 158.7 257 41.2
SalBow4G2873 Salvia bowleyana HOM05D005699 ORTHO05D007496 7.3e-37 158.3 229 41.5
QL08p037175 Quercus lobata HOM05D005699 ORTHO05D007496 6.2e-36 155.2 227 42.7
QL08p037250 Quercus lobata HOM05D005699 ORTHO05D007496 6.2e-36 155.2 227 42.7
Sopen07g030460 Solanum pennellii HOM05D005699 ORTHO05D007496 7.6e-34 148.3 105 70.5
AagrBONN_evm.TU.Sc2ySwM_228.4605 Anthoceros agrestis HOM05D005699 ORTHO05D007496 1.2e-31 141.0 240 37.1
CBR_g26242 Chara braunii HOM05D005699 ORTHO05D007496 2.3e-30 136.7 262 35.1
Pp3c13_15320 Physcomitrium patens HOM05D005699 ORTHO05D007496 2.5e-29 133.3 251 34.7
TPR.G13095 Trifolium pratense HOM05D005699 ORTHO05D007496 2.5e-29 133.3 450 27.6
SMO331G0093 Selaginella moellendorffii HOM05D005699 ORTHO05D007496 3.6e-28 129.4 242 36.0
Mapoly0056s0015 Marchantia polymorpha HOM05D005699 ORTHO05D007496 1.8e-27 127.1 284 29.9
Pp3c13_3550 Physcomitrium patens HOM05D005699 ORTHO05D007496 1.2e-26 124.4 239 36.0
Hma1.2p1_0050F.1_g028840 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 8.4e-25 118.2 250 34.8
Manes.03G092700 Manihot esculenta HOM05D005699 ORTHO05D007496 1.4e-24 117.5 190 40.5
SHI27569 Sapria himalayana HOM05D005699 ORTHO05D007496 1.0e-22 111.3 296 31.8
FvH4_3g17770 Fragaria vesca HOM05D005699 ORTHO05D007496 3.9e-22 109.4 202 37.1
MELO3C016111.2 Cucumis melo HOM05D005699 ORTHO05D007496 6.6e-22 108.6 242 34.7
Sc16g0007730 Simmondsia chinensis HOM05D005699 ORTHO05D007496 1.5e-21 107.5 209 35.9
CiPaw.11G155600 Carya illinoinensis HOM05D005699 ORTHO05D007496 2.1e-20 103.6 188 36.7
Thecc.07G131400 Theobroma cacao HOM05D005699 ORTHO05D007496 7.6e-18 95.1 85 57.6
Thecc.07G131900 Theobroma cacao HOM05D005699 ORTHO05D007496 4.2e-16 89.4 81 56.8
vmacro11968 Vaccinium macrocarpon HOM05D005699 ORTHO05D007496 9.3e-16 88.2 87 56.3
Cre06.g294800 Chlamydomonas reinhardtii HOM05D005699 ORTHO05D007496 1.6e-15 87.4 282 27.3
PRCOL_00000954 Prasinoderma coloniale HOM05D005699 ORTHO05D007496 1.6e-15 87.4 250 28.4
Thecc.07G131100 Theobroma cacao HOM05D005699 ORTHO05D007496 7.9e-15 85.1 77 54.5
Zm00001eb361870 Zea mays HOM05D005699 ORTHO05D007496 1.3e-14 84.3 67 59.7
MCO15G637 Micromonas commoda HOM05D005699 ORTHO05D007496 1.8e-14 84.0 94 47.9
MELO3C029615.2 Cucumis melo HOM05D005699 ORTHO05D170539 5.1e-14 82.4 87 52.9
Actinidia37024 Actinidia chinensis HOM05D005699 ORTHO05D007496 6.7e-14 82.0 73 58.9
MELO3C032042.2 Cucumis melo HOM05D005699 ORTHO05D000044 1.9e-13 80.5 53 73.6
SEGI_06384 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 4.3e-13 79.3 57 64.9
SEGI_05295 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 3.7e-12 76.3 143 39.2
HPP92_006376 Vanilla planifolia HOM05D005699 ORTHO05D007496 1.3e-09 67.8 124 41.1
Actinidia39422 Actinidia chinensis HOM05D005699 ORTHO05D056065 1.2e-07 61.2 43 65.1


User provided reference genes

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