Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 5.2e-87 324.3 162 100.0
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 2.4e-63 245.7 153 80.4
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 5.7e-57 224.6 135 80.7
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 1.8e-55 219.5 159 69.2
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.8e-55 219.5 133 79.7
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 4.1e-55 218.4 133 79.7
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 1.5e-54 216.5 132 78.0
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 3.4e-54 215.3 144 73.6
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 4.5e-54 214.9 127 81.1
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 5.9e-54 214.5 118 86.4
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 7.6e-54 214.2 133 76.7
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 7.6e-54 214.2 130 82.3
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 1.3e-53 213.4 132 81.1
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 1.3e-53 213.4 132 77.3
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 1.7e-53 213.0 125 82.4
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 2.2e-53 212.6 120 84.2
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 2.2e-53 212.6 159 67.9
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 2.9e-53 212.2 122 82.0
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 3.8e-53 211.8 131 76.3
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 5.0e-53 211.5 126 81.7
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 6.5e-53 211.1 120 84.2
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 6.5e-53 211.1 120 84.2
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 8.4e-53 210.7 122 81.1
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 1.1e-52 210.3 134 77.6
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 1.1e-52 210.3 130 76.2
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 1.1e-52 210.3 130 76.2
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 1.1e-52 210.3 149 69.1
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 1.9e-52 209.5 142 72.5
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 2.5e-52 209.1 119 84.0
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.5e-52 209.1 140 72.1
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.5e-52 209.1 140 72.1
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 2.5e-52 209.1 122 81.1
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 2.5e-52 209.1 129 77.5
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 2.5e-52 209.1 119 83.2
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.2e-52 208.8 119 82.4
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.2e-52 208.8 119 82.4
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.2e-52 208.8 119 82.4
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 3.2e-52 208.8 133 76.7
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 3.2e-52 208.8 124 78.2
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 3.2e-52 208.8 124 78.2
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 4.2e-52 208.4 139 73.4
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 5.5e-52 208.0 126 77.8
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 5.5e-52 208.0 119 82.4
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 9.3e-52 207.2 122 80.3
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 9.3e-52 207.2 119 81.5
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 9.3e-52 207.2 119 81.5
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 9.3e-52 207.2 132 75.8
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 1.2e-51 206.8 122 80.3
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 1.6e-51 206.5 120 84.2
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 1.6e-51 206.5 120 85.0
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 1.6e-51 206.5 118 81.4
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.6e-51 206.5 120 80.8
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 2.1e-51 206.1 119 83.2
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 2.1e-51 206.1 122 81.1
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 3.5e-51 205.3 118 83.1
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 6.1e-51 204.5 139 70.5
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 7.9e-51 204.1 120 80.8
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 7.9e-51 204.1 116 82.8
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 7.9e-51 204.1 121 78.5
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 1.3e-50 203.4 149 70.5
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 1.3e-50 203.4 124 79.0
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 1.8e-50 203.0 121 81.0
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.3e-50 202.6 117 82.1
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.3e-50 202.6 117 82.1
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 3.0e-50 202.2 129 76.0
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 3.9e-50 201.8 114 82.5
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 5.1e-50 201.4 149 68.5
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 6.7e-50 201.1 140 68.6
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 6.7e-50 201.1 125 77.6
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 8.7e-50 200.7 136 72.8
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.1e-49 200.3 150 67.3
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 1.1e-49 200.3 137 73.0
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 1.5e-49 199.9 136 72.8
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 2.5e-49 199.1 112 83.0
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 2.5e-49 199.1 134 73.1
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 3.3e-49 198.7 137 71.5
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 3.3e-49 198.7 137 71.5
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 3.3e-49 198.7 110 84.5
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 3.3e-49 198.7 136 72.1
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 3.3e-49 198.7 117 79.5
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 3.3e-49 198.7 115 81.7
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 4.3e-49 198.4 136 71.3
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 4.3e-49 198.4 120 81.7
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 5.7e-49 198.0 137 70.8
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 5.7e-49 198.0 137 70.8
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 5.7e-49 198.0 115 80.9
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 7.4e-49 197.6 117 79.5
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 9.7e-49 197.2 126 73.8
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 1.3e-48 196.8 135 68.9
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 1.6e-48 196.4 122 75.4
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 2.2e-48 196.1 149 66.4
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 3.7e-48 195.3 121 76.9
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 6.3e-48 194.5 115 80.0
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 3.1e-47 192.2 129 70.5
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 2.0e-46 189.5 129 69.8
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 1.4e-44 183.3 108 81.5
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 1.2e-43 180.3 114 75.4
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 3.9e-42 175.3 113 73.5
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 8.8e-42 174.1 131 61.1
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.1e-41 173.7 113 74.3
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 2.0e-41 172.9 121 66.9
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 9.7e-41 170.6 108 72.2
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 1.3e-40 170.2 115 73.0
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.4e-39 166.8 137 63.5
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 5.3e-39 164.9 128 65.6
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 2.7e-35 152.5 130 55.4
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 5.5e-28 128.3 120 57.5
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.6e-27 126.7 119 56.3
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 6.5e-21 104.8 118 40.7
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 7.5e-17 91.3 109 38.5
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 3.1e-15 85.9 108 40.7
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.0e-13 80.9 115 32.2
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 3.6e-11 72.4 45 71.1


User provided reference genes

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