Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 4.2e-214 748.0 468 100.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 3.1e-47 193.7 392 38.3
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.4e-44 184.9 338 40.8
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.4e-44 184.9 338 40.8
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 2.7e-43 180.6 327 40.4
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 1.1e-41 175.3 359 37.3
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 3.3e-41 173.7 284 44.7
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 9.6e-41 172.2 277 44.8
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 4.8e-40 169.9 329 43.5
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 2.6e-38 164.1 339 38.6
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 4.5e-38 163.3 371 38.5
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 4.9e-37 159.8 336 37.5
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 8.4e-37 159.1 340 38.8
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 1.1e-36 158.7 331 37.5
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 1.9e-36 157.9 330 40.0
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 1.9e-36 157.9 376 34.8
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 2.5e-36 157.5 331 37.5
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 3.2e-36 157.1 346 36.7
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 9.3e-36 155.6 193 50.8
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 2.1e-35 154.5 131 59.5
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 2.1e-35 154.5 341 40.8
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 3.5e-35 153.7 250 41.6
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 3.5e-35 153.7 249 43.8
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 6.0e-35 152.9 254 42.9
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 6.0e-35 152.9 258 40.7
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 6.0e-35 152.9 343 38.5
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 7.9e-35 152.5 440 31.4
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.8e-34 151.4 204 48.0
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 5.1e-34 149.8 236 42.4
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 5.1e-34 149.8 275 42.9
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 6.7e-34 149.4 337 37.1
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 8.7e-34 149.1 341 36.7
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 8.7e-34 149.1 336 36.0
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.5e-33 148.3 359 35.7
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 3.3e-33 147.1 131 59.5
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 5.7e-33 146.4 338 42.3
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 7.4e-33 146.0 353 37.7
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 7.4e-33 146.0 415 34.0
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 9.6e-33 145.6 323 37.5
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.3e-32 145.2 354 36.7
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 1.6e-32 144.8 269 39.4
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 1.6e-32 144.8 338 37.9
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 2.1e-32 144.4 364 37.1
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 2.1e-32 144.4 338 37.0
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 2.8e-32 144.1 260 39.2
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 2.8e-32 144.1 272 39.7
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 4.8e-32 143.3 353 39.1
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 6.3e-32 142.9 284 37.3
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 8.2e-32 142.5 324 38.0
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 1.1e-31 142.1 335 35.5
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 1.4e-31 141.7 254 42.9
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 1.8e-31 141.4 275 39.3
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.8e-31 141.4 351 35.3
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 4.1e-31 140.2 223 41.3
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 5.3e-31 139.8 352 36.1
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 1.2e-30 138.7 131 55.7
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 1.2e-30 138.7 349 35.8
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 3.4e-30 137.1 172 47.1
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 5.9e-30 136.3 262 39.7
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 1.0e-29 135.6 172 45.9
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.0e-29 135.6 172 45.9
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 1.3e-29 135.2 313 36.1
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 1.3e-29 135.2 325 33.8
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 1.7e-29 134.8 172 45.9
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 2.2e-29 134.4 142 51.4
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 2.9e-29 134.0 249 40.6
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 2.9e-29 134.0 248 39.1
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 2.9e-29 134.0 260 40.0
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 3.8e-29 133.7 325 33.5
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 3.8e-29 133.7 332 34.3
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 8.4e-29 132.5 267 36.7
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 8.4e-29 132.5 138 55.1
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 1.1e-28 132.1 364 35.4
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 1.4e-28 131.7 341 37.0
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 1.9e-28 131.3 372 35.2
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 2.5e-28 131.0 112 59.8
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 4.2e-28 130.2 335 32.5
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.2e-27 128.6 274 37.6
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.6e-27 128.3 255 39.2
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 2.1e-27 127.9 247 38.5
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 2.1e-27 127.9 329 34.7
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 4.6e-27 126.7 325 34.8
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 4.6e-27 126.7 275 37.8
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 6.1e-27 126.3 185 45.9
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 7.9e-27 125.9 185 45.9
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 1.8e-26 124.8 270 36.7
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 6.7e-26 122.9 324 32.7
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 8.7e-26 122.5 355 36.6
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 5.7e-25 119.8 173 47.4
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 5.7e-25 119.8 112 59.8
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 2.2e-24 117.9 131 48.9
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 2.4e-23 114.4 500 30.8
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 2.4e-23 114.4 139 48.9
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 3.1e-23 114.0 265 37.0
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 6.9e-23 112.8 248 36.3
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 1.5e-22 111.7 136 46.3
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 3.4e-22 110.5 348 34.2
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 3.4e-22 110.5 348 34.2
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 3.4e-22 110.5 250 36.8
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 3.4e-22 110.5 89 64.0
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 1.0e-21 109.0 133 49.6
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 8.5e-21 105.9 357 30.5
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 4.6e-19 100.1 157 43.3
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 2.3e-18 97.8 114 54.4
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 4.8e-16 90.1 107 49.5
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 7.2e-12 76.3 75 53.3
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 4.8e-08 63.5 43 76.7
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 1.1e-07 62.4 179 35.2
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 1.2e-06 58.9 448 26.1


User provided reference genes

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