Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 4.9e-93 344.4 161 100.0
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 1.4e-52 209.9 141 66.0
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 5.4e-52 208.0 146 61.6
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 7.1e-52 207.6 129 69.0
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 7.1e-52 207.6 159 60.4
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.2e-51 206.8 151 60.9
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 2.1e-51 206.1 125 70.4
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 2.7e-51 205.7 125 69.6
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 7.9e-51 204.1 126 69.8
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 5.1e-50 201.4 143 60.8
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 6.7e-50 201.1 125 66.4
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 8.7e-50 200.7 137 63.5
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.5e-49 199.9 154 56.5
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.5e-49 199.1 154 56.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 3.3e-49 198.7 142 62.0
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 3.3e-49 198.7 143 58.7
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 4.3e-49 198.4 125 66.4
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 7.4e-49 197.6 152 57.2
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 7.4e-49 197.6 173 53.2
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 9.6e-49 197.2 126 64.3
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.3e-48 196.8 127 64.6
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.6e-48 196.4 144 59.7
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 2.1e-48 196.1 129 63.6
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 2.1e-48 196.1 142 60.6
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.8e-48 194.9 151 57.0
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.8e-47 193.0 123 65.9
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 2.4e-47 192.6 132 61.4
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 2.4e-47 192.6 123 65.9
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 2.4e-47 192.6 131 61.1
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 5.3e-47 191.4 140 58.6
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 6.9e-47 191.0 133 59.4
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 9.0e-47 190.7 142 57.7
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 9.0e-47 190.7 128 61.7
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.5e-46 189.9 135 59.3
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 2.0e-46 189.5 125 62.4
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 3.4e-46 188.7 132 60.6
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 4.5e-46 188.3 143 56.6
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 5.8e-46 188.0 157 54.8
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 5.8e-46 188.0 142 59.2
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 5.8e-46 188.0 125 61.6
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 5.8e-46 188.0 117 65.8
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 7.6e-46 187.6 147 55.8
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 7.6e-46 187.6 143 57.3
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 9.9e-46 187.2 126 62.7
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.3e-45 186.8 146 56.8
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.7e-45 186.4 127 59.8
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 2.2e-45 186.0 159 54.7
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 2.2e-45 186.0 126 61.9
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 2.2e-45 186.0 178 49.4
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 2.9e-45 185.7 141 54.6
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.9e-45 185.7 139 57.6
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 3.8e-45 185.3 133 57.9
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 4.9e-45 184.9 126 61.9
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 4.9e-45 184.9 126 62.7
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 6.4e-45 184.5 159 50.3
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 8.4e-45 184.1 161 52.2
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 1.1e-44 183.7 150 55.3
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.4e-44 183.3 159 49.7
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 1.9e-44 183.0 121 64.5
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.4e-44 182.6 163 54.0
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.4e-44 182.6 149 53.7
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 2.4e-44 182.6 123 60.2
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 4.2e-44 181.8 164 53.7
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.2e-44 181.8 119 63.9
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 5.5e-44 181.4 135 57.0
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 5.5e-44 181.4 120 62.5
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 5.5e-44 181.4 122 59.8
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 1.2e-43 180.3 123 61.0
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 2.7e-43 179.1 123 60.2
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 3.5e-43 178.7 120 61.7
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 7.9e-43 177.6 140 54.3
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.0e-42 175.6 127 56.7
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 3.9e-42 175.3 125 57.6
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.9e-42 175.3 125 57.6
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.9e-42 175.3 125 57.6
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 5.1e-42 174.9 126 56.3
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 2.1e-40 169.5 106 65.1
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.0e-38 162.9 126 55.6
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 4.5e-38 161.8 100 66.0
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 5.8e-38 161.4 124 56.5
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.8e-37 158.7 120 55.0
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 1.4e-36 156.8 122 54.9
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 1.2e-35 153.7 109 56.9
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 3.5e-35 152.1 129 52.7
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 7.9e-35 151.0 128 54.7
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 2.5e-33 146.0 125 51.2
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 6.3e-32 141.4 125 50.4
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 4.1e-31 138.7 153 42.5
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 4.1e-31 138.7 115 47.8
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 3.4e-30 135.6 132 47.7
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 1.3e-29 133.7 84 64.3
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.7e-29 133.3 153 41.2
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.9e-29 132.5 133 47.4
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 9.3e-28 127.5 151 43.0
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.6e-27 126.7 82 62.2
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.0e-21 105.1 82 51.2
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.1e-15 85.5 56 64.3
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 4.2e-12 75.5 67 52.2
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 4.7e-11 72.0 53 58.5
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 3.0e-10 69.3 46 60.9
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 8.8e-10 67.8 127 26.8


User provided reference genes

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