Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2927 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 1.9e-104 382.5 190 100.0
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 3.0e-73 278.9 193 74.1
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 1.2e-71 273.5 189 73.0
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 2.3e-70 269.2 189 72.0
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 3.1e-70 268.9 165 77.6
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 6.8e-70 267.7 172 76.2
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 2.0e-69 266.2 180 72.2
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 2.6e-69 265.8 180 73.3
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 7.6e-69 264.2 178 74.2
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 7.6e-69 264.2 179 73.2
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 9.9e-69 263.8 178 74.2
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 9.9e-69 263.8 178 73.0
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 9.9e-69 263.8 191 72.3
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 1.3e-68 263.5 185 71.4
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 1.7e-68 263.1 183 72.1
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 2.2e-68 262.7 180 74.4
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 2.9e-68 262.3 165 76.4
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 2.9e-68 262.3 151 79.5
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 2.9e-68 262.3 151 78.8
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 3.7e-68 261.9 191 69.1
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.9e-68 261.5 178 73.6
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 4.9e-68 261.5 138 87.7
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 6.4e-68 261.2 181 74.0
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 8.4e-68 260.8 183 72.1
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 1.9e-67 259.6 166 75.9
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 1.9e-67 259.6 151 78.1
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 2.4e-67 259.2 175 76.0
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 3.2e-67 258.8 148 81.8
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 4.1e-67 258.5 139 84.2
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 5.4e-67 258.1 143 83.2
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 7.1e-67 257.7 139 85.6
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 1.2e-66 256.9 141 84.4
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 2.1e-66 256.1 139 85.6
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 3.5e-66 255.4 164 73.2
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 4.6e-66 255.0 141 83.0
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 4.6e-66 255.0 170 73.5
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 6.0e-66 254.6 181 71.3
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 7.8e-66 254.2 174 72.4
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 1.7e-65 253.1 190 69.5
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 2.3e-65 252.7 172 70.3
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 3.0e-65 252.3 167 72.5
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 3.9e-65 251.9 184 66.8
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 3.9e-65 251.9 182 68.1
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 3.9e-65 251.9 139 82.7
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 5.1e-65 251.5 184 67.9
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 8.6e-65 250.8 190 68.4
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 8.6e-65 250.8 182 68.7
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 8.6e-65 250.8 178 69.1
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 8.6e-65 250.8 137 83.9
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 8.6e-65 250.8 180 71.1
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 1.1e-64 250.4 148 77.7
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.1e-64 250.4 180 67.8
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 1.5e-64 250.0 189 67.2
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 1.5e-64 250.0 139 82.7
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 3.3e-64 248.8 155 76.1
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 3.3e-64 248.8 155 76.1
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 5.6e-64 248.1 171 69.6
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 5.6e-64 248.1 146 80.8
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 7.3e-64 247.7 188 65.4
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 7.3e-64 247.7 184 66.3
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 1.6e-63 246.5 163 73.0
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 2.1e-63 246.1 181 69.1
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 3.6e-63 245.4 139 79.9
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 3.6e-63 245.4 139 79.9
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 6.2e-63 244.6 184 69.0
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 1.1e-62 243.8 169 70.4
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 1.4e-62 243.4 186 66.7
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 3.1e-62 242.3 183 69.9
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 3.1e-62 242.3 163 72.4
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 4.0e-62 241.9 138 81.2
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 5.2e-62 241.5 194 64.4
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 6.8e-62 241.1 195 63.1
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 8.9e-62 240.7 134 83.6
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 1.5e-61 240.0 139 78.4
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 2.0e-61 239.6 170 68.8
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 2.6e-61 239.2 182 66.5
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 7.6e-61 237.7 143 76.9
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 9.9e-61 237.3 173 67.1
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 1.7e-60 236.5 194 62.9
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 2.9e-60 235.7 143 79.0
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 2.9e-60 235.7 138 79.0
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 4.9e-60 235.0 173 66.5
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 1.1e-59 233.8 187 65.2
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 1.1e-59 233.8 182 62.6
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 2.4e-59 232.6 189 60.3
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 5.4e-59 231.5 134 79.1
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 7.1e-59 231.1 136 79.4
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 1.2e-58 230.3 192 59.4
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 1.6e-58 229.9 181 66.9
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 7.8e-58 227.6 180 66.7
Lsat_1_v5_gn_9_120240 Lactuca sativa HOM05D007027 ORTHO05D008765 2.5e-56 222.6 175 68.0
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 4.3e-56 221.9 178 62.9
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 8.1e-55 217.6 207 58.9
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 1.1e-54 217.2 244 49.2
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 2.2e-52 209.5 186 60.2
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 8.4e-52 207.6 140 72.1
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 3.2e-51 205.7 178 60.7
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 1.6e-50 203.4 160 63.8
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 1.6e-50 203.4 160 63.8
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 6.0e-50 201.4 141 69.5
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 7.9e-50 201.1 209 56.0
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 3.6e-47 192.2 139 64.7
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 9.0e-46 187.6 180 57.8
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 1.2e-45 187.2 133 66.2
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 1.4e-43 180.3 139 62.6
Migut.B00774 Erythranthe guttata HOM05D007027 ORTHO05D008765 1.9e-43 179.9 97 86.6
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 4.6e-42 175.3 135 67.4
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 2.1e-34 149.8 101 71.3
RcHm_v2.0_Chr3g0481081 Rosa chinensis HOM05D007027 ORTHO05D008765 1.9e-32 143.3 79 82.3
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 6.5e-28 128.3 163 44.8
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 1.8e-09 67.0 133 31.6
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 1.8e-09 67.0 140 31.4
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 5.1e-09 65.5 140 31.4
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 3.3e-08 62.8 168 31.5
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 9.7e-08 61.2 164 30.5
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 9.7e-08 61.2 164 30.5
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 1.3e-07 60.8 147 31.3
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 1.7e-07 60.5 165 31.5
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 3.7e-07 59.3 137 32.1
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 6.3e-07 58.5 165 28.5
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 8.2e-07 58.2 165 29.7
SGA_v2.0_scaffold318G48475 Striga asiatica HOM05D006401 ORTHO05D007864 8.2e-07 58.2 147 27.9
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 1.1e-06 57.8 149 31.5
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 1.4e-06 57.4 165 30.9
MCO13G233 Micromonas commoda HOM05D006708 ORTHO05D008321 1.4e-06 57.4 133 32.3
Carub.0007s3123 Capsella rubella HOM05D006401 ORTHO05D007864 1.8e-06 57.0 136 26.5
CsaV3_6G000260 Cucumis sativus L. HOM05D006708 ORTHO05D008321 4.1e-06 55.8 134 30.6
AT5G35400 Arabidopsis thaliana HOM05D006401 ORTHO05D007864 5.3e-06 55.5 136 27.2


User provided reference genes

Program Settings