Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 8.1e-158 560.5 303 100.0
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 1.7e-102 376.7 239 88.3
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 8.4e-54 214.9 366 44.8
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 7.6e-47 191.8 331 44.1
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 4.9e-46 189.1 347 43.8
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.9e-45 187.2 337 42.4
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 6.0e-44 182.2 334 41.9
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.0e-43 181.4 335 42.1
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.8e-43 180.6 353 42.2
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 2.3e-43 180.3 357 42.6
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 8.7e-43 178.3 373 40.5
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.1e-42 177.9 359 42.1
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 5.6e-42 175.6 361 41.6
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 2.8e-41 173.3 364 39.8
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.8e-41 173.3 332 42.8
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 8.1e-41 171.8 351 40.7
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 1.1e-40 171.4 339 39.5
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.8e-40 170.6 339 40.7
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 6.9e-40 168.7 369 40.1
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 6.9e-40 168.7 340 41.8
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 6.9e-40 168.7 347 40.6
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 1.5e-39 167.5 356 40.2
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 2.0e-39 167.2 332 40.7
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 3.4e-39 166.4 345 40.3
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 5.8e-39 165.6 343 41.1
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 7.6e-39 165.2 334 39.8
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 9.9e-39 164.9 343 39.7
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 1.7e-38 164.1 361 40.7
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 1.7e-38 164.1 363 40.5
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 2.2e-38 163.7 340 40.3
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 2.2e-38 163.7 305 41.6
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 2.9e-38 163.3 351 40.5
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 4.9e-38 162.5 365 38.1
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 1.1e-37 161.4 310 40.6
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.1e-37 161.4 351 39.9
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 1.4e-37 161.0 347 39.2
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.4e-37 161.0 355 41.1
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 2.4e-37 160.2 360 40.0
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 5.5e-37 159.1 332 37.7
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.2e-36 157.9 337 38.3
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 2.1e-36 157.1 357 38.4
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 6.0e-36 155.6 365 38.4
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 6.0e-36 155.6 310 40.3
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 7.9e-36 155.2 383 37.1
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 7.9e-36 155.2 325 40.0
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 1.0e-35 154.8 341 40.8
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 1.3e-35 154.5 349 38.1
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-35 154.5 351 39.3
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 1.8e-35 154.1 323 40.6
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.8e-35 154.1 316 38.3
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.3e-35 153.7 348 38.2
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 2.3e-35 153.7 354 38.4
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 3.9e-35 152.9 374 38.2
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 5.1e-35 152.5 362 41.2
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 5.1e-35 152.5 294 40.5
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 6.7e-35 152.1 325 39.4
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 6.7e-35 152.1 365 38.4
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 8.7e-35 151.8 360 37.2
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 1.1e-34 151.4 328 41.2
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.5e-34 151.0 374 36.6
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.9e-34 150.6 319 38.6
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 3.3e-34 149.8 365 38.1
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 7.4e-34 148.7 364 37.6
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 7.4e-34 148.7 357 37.8
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 9.6e-34 148.3 362 38.1
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 9.6e-34 148.3 321 39.3
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 9.6e-34 148.3 352 38.1
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.3e-33 147.9 330 38.2
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.3e-33 147.9 342 38.0
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.6e-33 147.5 281 39.9
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 1.6e-33 147.5 340 37.4
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.6e-33 147.5 308 39.6
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 2.8e-33 146.7 327 39.8
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.7e-33 146.4 325 38.2
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 4.8e-33 146.0 355 36.6
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 6.2e-33 145.6 343 39.1
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 6.2e-33 145.6 323 40.6
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 6.2e-33 145.6 351 37.6
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.4e-32 144.4 358 37.4
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.4e-32 144.4 329 39.2
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.4e-32 144.4 327 36.1
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.8e-32 144.1 338 37.0
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.8e-32 144.1 281 38.8
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 2.4e-32 143.7 357 37.5
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 4.0e-32 142.9 327 34.9
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 6.9e-32 142.1 323 38.4
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 6.9e-32 142.1 327 35.5
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 9.0e-32 141.7 310 38.1
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 1.5e-31 141.0 365 37.3
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 2.0e-31 140.6 341 36.4
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.6e-31 140.2 335 36.7
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 2.6e-31 140.2 313 39.0
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 2.6e-31 140.2 303 37.3
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.4e-31 139.8 300 38.0
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 3.4e-31 139.8 336 37.5
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 4.5e-31 139.4 333 39.6
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 5.8e-31 139.0 301 39.5
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.0e-30 138.3 337 37.4
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.0e-30 138.3 303 37.6
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 2.9e-30 136.7 326 38.0
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 2.9e-30 136.7 342 35.7
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 3.8e-30 136.3 332 36.7
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 4.9e-30 136.0 325 39.1
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 4.9e-30 136.0 333 37.5
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.4e-29 134.4 306 36.3
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 2.5e-29 133.7 298 37.9
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 3.2e-29 133.3 312 40.4
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 3.5e-28 129.8 356 36.2
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 3.5e-28 129.8 317 37.9
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 3.5e-28 129.8 296 38.5
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 6.0e-28 129.0 339 38.6
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 7.9e-28 128.6 342 36.0
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 1.3e-27 127.9 335 36.1
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 1.3e-27 127.9 339 36.3
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.3e-27 127.9 337 37.1
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 3.9e-27 126.3 335 35.2
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 8.7e-27 125.2 352 35.8
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 8.7e-27 125.2 352 35.8
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 1.1e-26 124.8 346 34.1
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 1.5e-26 124.4 283 41.3
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 1.5e-26 124.4 360 36.4
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 1.9e-26 124.0 300 35.7
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 1.9e-26 124.0 296 39.5
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.5e-26 123.6 265 38.1
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 2.5e-26 123.6 234 43.6
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 5.7e-26 122.5 298 37.6
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 9.7e-26 121.7 297 35.4
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.7e-25 119.8 338 32.8
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.7e-25 119.8 332 34.0
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 4.8e-25 119.4 299 34.4
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 8.2e-25 118.6 148 56.1
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.1e-24 118.2 327 33.3
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 1.4e-24 117.9 313 34.2
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 1.4e-24 117.9 308 34.7
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.8e-24 117.5 310 35.2
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 6.9e-24 115.5 317 35.6
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 1.5e-23 114.4 280 34.6
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 8.5e-22 108.6 207 40.6
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 3.2e-21 106.7 226 38.9
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 3.6e-20 103.2 174 41.4
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 3.6e-20 103.2 174 41.4
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 3.0e-19 100.1 331 31.7
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 6.7e-19 99.0 193 38.9
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 8.8e-19 98.6 303 34.0
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 1.5e-18 97.8 185 40.5
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 2.5e-18 97.1 307 32.9
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 3.3e-18 96.7 128 46.9
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 5.7e-18 95.9 183 42.1
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 9.7e-18 95.1 203 39.9
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 2.8e-17 93.6 327 31.2
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 8.2e-17 92.0 276 30.8
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 3.1e-16 90.1 213 36.6
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 6.9e-16 89.0 324 32.4
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 2.0e-15 87.4 306 34.0
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 2.6e-15 87.0 260 34.2
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 5.9e-15 85.9 316 32.0
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.3e-14 84.7 255 34.5
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 7.2e-13 79.0 278 34.2
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.6e-12 77.8 268 33.2
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 3.6e-12 76.6 96 54.2
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 2.3e-11 73.9 268 32.5
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 8.8e-11 72.0 254 32.7
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 8.8e-11 72.0 129 44.2
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.1e-10 71.6 177 37.9
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 2.0e-10 70.9 411 28.2
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 2.2e-09 67.4 196 35.7
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 3.7e-09 66.6 98 43.9
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.1e-08 65.1 126 45.2
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.6e-07 60.5 170 36.5
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 5.0e-06 56.2 201 32.3
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 5.0e-06 56.2 201 32.3


User provided reference genes

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